| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g28547 | 6:3,971,728-3,973,312 | + | C2H6g02365 | CX6g043727 | LOC_Os06g09240 | Os06g0192100 | OsLSC6 | Detail |
| C1H6g31613 | 6:3,975,551-3,977,529 | - | C2H6g19960 | CX6g045845 | LOC_Os06g09270 | Os06g0192400 | - | Detail |
| C1H6g27949 | 6:3,984,223-3,991,608 | + | C2H6g04525 | CX6g045203 | LOC_Os06g09280 | Os06g0192500 | - | Detail |
| C1H6g04586 | 6:3,991,982-3,995,172 | + | C2H6g12013 | CX6g042459 | LOC_Os06g09290 | Os06g0192600 | OsRpt1a | Detail |
| C1H6g30948 | 6:4,013,269-4,016,386 | + | C2H6g17864 | CX6g045517 | LOC_Os06g09320 | Os06g0192900 | - | Detail |
| C1H6g10031 | 6:4,017,288-4,020,979 | - | C2H6g04615 | CX6g043243 | LOC_Os06g09330 | Os06g0193000 | - | Detail |
| C1H6g30180 | 6:4,027,173-4,029,872 | + | C2H6g26815 | CX6g045049 | LOC_Os06g09340 | Os06g0193200 | - | Detail |
| C1H6g07725 | 6:4,030,785-4,031,440 | - | C2H6g30543 | CX6g043220 | LOC_Os06g09350 | Os06g0193300 | - | Detail |
| C1H6g11807 | 6:4,037,468-4,049,174 | - | C2H6g03934 | CX6g041840 | LOC_Os06g09370 | Os06g0193400 | - | Detail |
| C1H6g29803 | 6:4,062,570-4,065,193 | + | C2H6g08826 | CX6g041880 | LOC_Os06g09390 | Os06g0194000 | - | Detail |
| C1H6g31722 | 6:4,086,354-4,087,864 | + | C2H6g02269 | CX6g042151 | LOC_Os06g09420 | Os06g0194400 | - | Detail |
| C1H6g01501 | 6:4,110,326-4,116,195 | - | C2H6g27649 | CX6g042634 | LOC_Os06g09450 | Os06g0194900 | - | Detail |
| C1H6g27044 | 6:4,125,888-4,136,186 | - | C2H6g14723 | CX6g045871 | LOC_Os06g09540 | Os06g0195600 | - | Detail |
| C1H6g05206 | 6:4,149,118-4,151,226 | + | C2H6g17745 | CX6g042315 | LOC_Os06g09560 | Os06g0195800 | - | Detail |
| C1H6g25687 | 6:4,153,545-4,155,575 | - | C2H6g02523 | CX6g045819 | LOC_Os06g09570 | Os06g0195900 | - | Detail |
| C1H6g00287 | 6:4,166,492-4,168,508 | - | C2H6g08432 | CX6g044294 | LOC_Os06g09610 | Os06g0196300 | - | Detail |
| C1H6g16774 | 6:4,170,211-4,173,666 | - | C2H6g19355 | CX6g045160 | LOC_Os06g09620 | Os06g0196500 | - | Detail |
| C1H6g19907 | 6:4,174,985-4,178,364 | - | C2H6g25460 | CX6g043725 | LOC_Os06g09630 | Os06g0196600 | OsKASI, KASI | Detail |
| C1H6g21683 | 6:4,188,283-4,195,314 | + | C2H6g18661 | CX6g045833 | LOC_Os06g09660 | Os06g0196700 | ARF16, OsARF16 | Detail |
| C1H6g17273 | 6:4,196,628-4,201,133 | + | C2H6g05851 | CX6g042131 | LOC_Os06g09679 | Os06g0197575 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022399 | 2:3,844,651-3,846,658 | - | C1H2g09345 | C2H2g12176 | LOC_Os02g08310 | Os02g0179400 | - | Detail |
| CX2g020585 | 2:3,853,439-3,857,402 | + | C1H2g30953 | C2H2g24288 | LOC_Os02g08320 | Os02g0179500 | - | Detail |
| CX2g020007 | 2:3,858,484-3,860,469 | - | C1H2g15298 | - | LOC_Os02g08330 | Os02g0179600 | - | Detail |
| CX2g020510 | 2:3,862,703-3,867,714 | - | C1H2g23751 | C2H2g01634 | LOC_Os02g08350 | Os02g0179800 | - | Detail |
| CX2g023636 | 2:3,869,823-3,878,213 | + | C1H2g17009 | C2H2g05800 | LOC_Os02g08360 | Os02g0179900 | - | Detail |
| CX2g023036 | 2:3,873,368-3,873,719 | - | - | - | - | Os02g0179950 | - | Detail |
| CX2g019636 | 2:3,881,555-3,884,206 | + | C1H2g04017 | C2H2g08895 | LOC_Os02g08364 | Os02g0180000 | - | Detail |
| CX2g022824 | 2:3,885,102-3,886,549 | - | C1H2g13865 | C2H2g28931 | LOC_Os02g08370 | Os02g0180100 | - | Detail |
| CX2g023398 | 2:3,889,333-3,892,535 | + | C1H2g02146 | C2H2g25419 | LOC_Os02g08380 | Os02g0180200 | LA2, LTA1 | Detail |
| CX2g022601 | 2:3,908,140-3,909,743 | + | C1H2g01164 | C2H2g28103 | LOC_Os02g08400 | Os02g0180400 | HHC2 | Detail |
| CX2g022893 | 2:3,913,167-3,915,472 | - | C1H2g08033 | C2H2g19969 | LOC_Os02g08410 | Os02g0180500 | - | Detail |
| CX2g022487 | 2:3,919,740-3,922,740 | + | C1H2g12941 | C2H2g21393 | LOC_Os02g08420 | Os02g0180700 | OsCCR21 | Detail |
| CX2g019488 | 2:3,954,898-3,955,137 | + | - | - | - | Os02g0180900 | - | Detail |
| CX2g020326 | 2:3,975,216-3,976,612 | + | C1H2g19399 | C2H2g08597 | LOC_Os02g08440 | Os02g0181300 | WRKY71, OsWRKY71 | Detail |
| CX2g018962 | 2:3,989,333-3,990,444 | + | C1H2g31251 | C2H2g13400 | LOC_Os02g08470 | Os02g0181700 | - | Detail |
| CX2g021549 | 2:3,994,499-3,996,833 | + | C1H2g13602 | C2H2g22677 | LOC_Os02g08480 | Os02g0181800 | - | Detail |
| CX2g021572 | 2:3,998,233-4,003,170 | - | C1H2g14304 | C2H2g06559 | LOC_Os02g08490 | Os02g0181900 | - | Detail |
| CX2g020537 | 2:4,004,752-4,008,725 | - | C1H2g19533 | C2H2g18423 | LOC_Os02g08500 | Os02g0182100 | RR24, OsRR24, Rrb2, Orr4, OsRR17, OsRRB2, DLC1 | Detail |
| CX2g023903 | 2:4,015,037-4,015,216 | - | - | - | - | - | - | Detail |
| CX2g019859 | 2:4,026,776-4,027,369 | - | C1H2g06188 | - | LOC_Os02g08510 | Os02g0182300 | - | Detail |