| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02801 | 1:22,781,895-22,783,760 | + | C1H1g02990 | CX1g003750 | LOC_Os01g44360 | Os01g0634900 | - | Detail |
| C2H1g14029 | 1:22,800,599-22,804,042 | + | C1H1g03527 | CX1g001073 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C2H1g03825 | 1:22,806,305-22,807,773 | + | C1H1g07657 | CX8g052292 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C2H1g05065 | 1:22,812,063-22,818,989 | - | C1H1g22176 | CX1g000646 | LOC_Os01g44430 | Os01g0635600 | - | Detail |
| C2H1g18946 | 1:22,832,565-22,835,056 | - | C1H1g27414 | CX1g003935 | LOC_Os01g44960 | Os01g0636400 | - | Detail |
| C2H1g07403 | 1:22,844,565-22,848,440 | + | C1H1g00331 | CX1g001605 | LOC_Os01g44970 | Os01g0636500 | - | Detail |
| C2H1g02176 | 1:22,850,866-22,853,732 | - | C1H1g13180 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C2H1g26854 | 1:22,854,799-22,862,607 | - | C1H1g21121 | CX1g006855 | LOC_Os01g44990 | Os01g0636700 | OsCHR745, CHR745 | Detail |
| C2H1g21987 | 1:22,872,357-22,877,333 | - | C1H1g23587 | CX1g002420 | LOC_Os01g45020 | Os01g0637100 | - | Detail |
| C2H1g25141 | 1:22,894,595-22,896,402 | - | - | CX1g003226 | LOC_Os01g45040 | Os01g0637300 | - | Detail |
| C2H1g19088 | 1:22,902,539-22,906,552 | + | C1H1g00331 | CX1g001605 | LOC_Os01g45060 | Os01g0637500 | OsPG3 | Detail |
| C2H1g22263 | 1:22,908,608-22,911,930 | - | C1H1g13180 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C2H1g15078 | 1:22,915,510-22,916,308 | + | C1H1g21245 | CX1g000311 | LOC_Os01g45090 | Os01g0637800 | OsMYB305 | Detail |
| C2H1g07012 | 1:22,958,679-22,959,299 | + | C1H1g25999 | CX1g003479 | LOC_Os01g45160 | Os01g0638800 | - | Detail |
| C2H1g28691 | 1:22,969,162-22,972,367 | + | C1H1g28061 | CX1g000740 | LOC_Os01g45190 | Os01g0639100 | OsRH2 | Detail |
| C2H1g30211 | 1:22,973,098-22,976,456 | - | C1H1g08315 | CX1g002505 | LOC_Os01g45200 | Os01g0639200 | Snl6 | Detail |
| C2H1g06985 | 1:22,978,466-22,979,033 | - | C1H1g08315 | CX1g002505 | LOC_Os01g45200 | Os01g0639200 | Snl6 | Detail |
| C2H1g17536 | 1:23,015,736-23,024,618 | + | C1H1g11479 | CX1g002383 | LOC_Os01g45274 | Os01g0639900 | BETACA1, OsβCA1, OsbCA1 | Detail |
| C2H1g27294 | 1:23,027,541-23,031,034 | + | C1H1g17843 | CX1g007210 | LOC_Os01g45290 | Os01g0640000 | - | Detail |
| C2H1g21978 | 1:23,032,721-23,038,389 | - | C1H1g22957 | CX1g000695 | LOC_Os01g45320 | Os01g0640200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022286 | 2:3,721,126-3,722,913 | - | C1H2g09011 | C2H2g27738 | LOC_Os02g08110 | Os02g0177700 | - | Detail |
| CX2g022124 | 2:3,731,685-3,736,947 | - | C1H2g27287 | C2H2g12927 | LOC_Os02g08120 | Os02g0177800 | - | Detail |
| CX2g019995 | 2:3,741,204-3,744,877 | + | C1H2g28459 | C2H2g07746 | LOC_Os02g08130 | Os02g0177900 | - | Detail |
| CX2g024854 | 2:3,745,386-3,748,343 | - | C1H2g30647 | C2H2g14463 | LOC_Os02g08140 | Os02g0178000 | - | Detail |
| CX2g023396 | 2:3,754,160-3,755,425 | + | C1H2g28373 | C2H2g17770 | LOC_Os02g08150 | Os02g0178100 | - | Detail |
| CX2g020766 | 2:3,757,406-3,760,776 | + | C1H2g21750 | C2H2g04824 | LOC_Os02g08160 | Os02g0178200 | - | Detail |
| CX2g021548 | 2:3,762,971-3,763,120 | - | - | - | - | - | - | Detail |
| CX2g023860 | 2:3,765,231-3,765,815 | - | C1H2g10276 | - | LOC_Os02g08170 | Os06g0654400 | - | Detail |
| CX2g023441 | 2:3,771,210-3,771,609 | + | C1H2g28628 | C2H2g23387 | LOC_Os02g08180 | Os02g0178400 | - | Detail |
| CX2g023345 | 2:3,773,844-3,776,967 | - | C1H2g01304 | C2H2g26582 | LOC_Os02g08190 | Os02g0178500 | - | Detail |
| CX2g022788 | 2:3,780,733-3,781,251 | - | C1H2g06394 | C2H2g18111 | LOC_Os02g08200 | Os02g0178600 | - | Detail |
| CX2g022199 | 2:3,786,698-3,789,232 | + | C1H2g21156 | - | LOC_Os02g06310 | - | - | Detail |
| CX2g021716 | 2:3,792,429-3,793,182 | + | C1H2g04350 | C2H2g23988 | LOC_Os02g08220 | Os02g0178700 | OsbHLH157 | Detail |
| CX2g019198 | 2:3,794,844-3,801,841 | - | C1H2g14635 | C2H2g27041 | LOC_Os02g08230 | Os02g0178800 | OsGL1-2 | Detail |
| CX2g021989 | 2:3,804,130-3,804,288 | + | - | - | - | - | - | Detail |
| CX2g019436 | 2:3,808,236-3,808,597 | - | - | - | - | - | - | Detail |
| CX2g019069 | 2:3,817,155-3,822,284 | + | C1H2g16007 | C2H2g11136 | LOC_Os02g08240 | Os02g0179000 | - | Detail |
| CX2g022017 | 2:3,824,379-3,827,905 | + | C1H2g00884 | C2H2g11136 | LOC_Os02g08260 | Os02g0179100 | - | Detail |
| CX2g024480 | 2:3,830,915-3,833,707 | - | C1H2g27338 | C2H2g22090 | LOC_Os02g08270 | Os02g0179200 | - | Detail |
| CX2g023864 | 2:3,839,752-3,843,978 | + | C1H2g15683 | C2H2g18129 | LOC_Os02g08300 | Os02g0179300 | - | Detail |