| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g15221 | 3:13,759,306-13,761,198 | - | C1H3g20016 | CX3g026189 | LOC_Os03g27120 | Os03g0388900 | OsMC1 | Detail |
| C2H3g04943 | 3:13,780,074-13,781,487 | - | C1H3g10570 | CX3g025998 | LOC_Os03g27170 | Os03g0389000 | OsMC3 | Detail |
| C2H3g08633 | 3:13,785,102-13,789,396 | - | C1H3g25808 | CX3g029196 | LOC_Os03g27190 | Os03g0389100 | OsMC8 | Detail |
| C2H3g29112 | 3:13,813,246-13,813,518 | - | C1H3g15024 | - | - | Os03g0389175 | - | Detail |
| C2H3g00005 | 3:13,826,049-13,826,309 | - | C1H3g15059 | CX3g030618 | LOC_Os03g27210 | Os03g0389400 | OsMC2 | Detail |
| C2H3g14323 | 3:13,826,803-13,827,772 | - | C1H3g23745 | CX3g030618 | LOC_Os03g27210 | Os03g0389400 | OsMC2 | Detail |
| C2H3g24243 | 3:13,848,887-13,853,227 | + | C1H3g20114 | CX3g025732 | LOC_Os03g27230 | Os03g0389700 | OsDAHPS1, DAHPS1 | Detail |
| C2H3g12972 | 3:13,857,326-13,864,732 | + | C1H3g30971 | CX3g028319 | LOC_Os03g27250 | Os03g0389900 | - | Detail |
| C2H3g06738 | 3:13,865,728-13,868,014 | - | C1H3g19742 | CX3g027960 | LOC_Os03g27260 | Os03g0390000 | - | Detail |
| C2H3g21967 | 3:13,871,749-13,876,328 | - | C1H3g17252 | CX3g031288 | LOC_Os03g27280 | Os03g0390200 | - | Detail |
| C2H3g10154 | 3:13,893,466-13,898,070 | + | C1H3g08377 | CX3g029813 | LOC_Os03g27290 | Os03g0390400 | - | Detail |
| C2H3g16150 | 3:13,901,043-13,902,954 | + | C1H3g03476 | CX3g025879 | LOC_Os03g27310 | Os03g0390600 | - | Detail |
| C2H3g25165 | 3:13,903,891-13,907,205 | + | C1H3g30084 | CX3g025932 | LOC_Os03g27320 | Os03g0390700 | OsTTL | Detail |
| C2H3g02856 | 3:13,909,187-13,913,015 | + | C1H3g29350 | CX3g027950 | LOC_Os03g27350 | Os03g0391000 | - | Detail |
| C2H3g17457 | 3:13,916,645-13,917,868 | + | C1H3g09929 | CX3g026532 | LOC_Os03g27360 | Os03g0391100 | - | Detail |
| C2H3g06527 | 3:13,923,209-13,928,534 | + | C1H3g16806 | CX3g028456 | LOC_Os03g27370 | Os03g0391400 | OsPLDα6, OsPLDalpha6 | Detail |
| C2H3g10546 | 3:13,939,602-13,943,256 | - | C1H3g30949 | CX3g028215 | LOC_Os03g27390 | Os03g0391700 | OsbHLH138 | Detail |
| C2H3g23808 | 3:13,974,875-13,976,837 | - | C1H3g13034 | CX3g030816 | LOC_Os03g27420 | Os03g0392000 | - | Detail |
| C2H3g21955 | 3:13,986,454-13,990,854 | + | C1H3g16459 | CX3g030757 | LOC_Os03g27450 | Os03g0392300 | - | Detail |
| C2H3g23340 | 3:14,004,359-14,008,083 | - | C1H3g12299 | CX3g027984 | LOC_Os03g27480 | Os03g0392600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023186 | 2:3,545,174-3,548,115 | - | C1H2g13410 | C2H2g04831 | LOC_Os02g07850 | Os02g0175200 | - | Detail |
| CX2g019528 | 2:3,552,577-3,559,640 | + | C1H2g02033 | C2H2g15931 | LOC_Os02g07870 | Os02g0175400 | - | Detail |
| CX2g019472 | 2:3,562,394-3,566,441 | + | C1H2g00289 | C2H6g29640 | LOC_Os02g07880 | Os02g0175500 | - | Detail |
| CX2g020001 | 2:3,567,888-3,568,214 | + | - | - | - | Os02g0510400 | - | Detail |
| CX2g023543 | 2:3,571,149-3,571,595 | + | C1H2g00014 | - | LOC_Os02g07890 | Os02g0175600 | - | Detail |
| CX2g019494 | 2:3,572,407-3,576,219 | - | C1H2g07080 | C2H2g23705 | LOC_Os02g07900 | Os02g0175700 | OsANTH3 | Detail |
| CX2g023593 | 2:3,577,476-3,577,760 | + | C1H2g29388 | C2H2g17525 | LOC_Os02g07910 | Os02g0175800 | - | Detail |
| CX2g020425 | 2:3,580,910-3,583,185 | - | C1H2g08053 | C2H2g13326 | LOC_Os02g07920 | Os02g0175900 | - | Detail |
| CX2g024012 | 2:3,588,816-3,589,484 | - | C1H2g09013 | C2H2g12429 | LOC_Os02g07930 | Os02g0176000 | - | Detail |
| CX2g024713 | 2:3,606,740-3,616,365 | - | C1H2g28078 | C2H2g10282 | LOC_Os02g07960 | Os02g0176100 | - | Detail |
| CX2g018896 | 2:3,626,039-3,626,278 | + | - | - | - | Os02g0176300 | - | Detail |
| CX2g023070 | 2:3,627,315-3,628,343 | - | C1H2g25304 | C2H2g27167 | LOC_Os02g07980 | Os02g0176400 | - | Detail |
| CX2g023980 | 2:3,640,275-3,652,430 | - | C1H2g10513 | C2H2g16155 | LOC_Os02g08010 | Os02g0176700 | OsACA9 | Detail |
| CX2g022492 | 2:3,665,149-3,665,355 | + | - | - | - | - | - | Detail |
| CX2g022339 | 2:3,667,385-3,670,116 | - | C1H2g25148 | C2H2g22723 | LOC_Os02g08030 | Os02g0176900 | - | Detail |
| CX2g023491 | 2:3,675,862-3,676,538 | + | - | - | - | - | - | Detail |
| CX2g022848 | 2:3,687,090-3,690,618 | + | C1H2g16100 | C2H2g01390 | LOC_Os02g08070 | Os02g0177300 | - | Detail |
| CX2g024774 | 2:3,700,751-3,701,924 | - | C1H2g15920 | C2H2g10970 | LOC_Os02g08080 | Os02g0177400 | - | Detail |
| CX2g020793 | 2:3,705,318-3,706,317 | - | C1H2g27198 | C2H2g24704 | LOC_Os02g08090 | Os02g0177500 | - | Detail |
| CX2g022957 | 2:3,714,531-3,719,487 | + | C1H2g08951 | C2H2g12631 | LOC_Os02g08100 | Os02g0177600 | 4CL3, Os4CL3 | Detail |