| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g25576 | 9:12,777,935-12,778,156 | + | C1H9g13617 | CX9g056019 | LOC_Os09g25314 | Os09g0420700 | - | Detail |
| C2H9g18572 | 9:12,782,612-12,788,144 | - | C1H9g09470 | CX9g058181 | LOC_Os09g25330 | Os09g0420900 | - | Detail |
| C2H9g09588 | 9:12,804,426-12,808,292 | - | C1H9g26024 | CX9g055908 | LOC_Os09g25370 | Os09g0421100 | - | Detail |
| C2H9g10962 | 9:12,809,236-12,823,129 | - | C1H9g02641 | CX9g057078 | LOC_Os09g25380 | Os09g0421200 | - | Detail |
| C2H9g17055 | 9:12,823,984-12,828,188 | - | C1H9g29866 | CX9g056194 | LOC_Os09g25390 | Os09g0421300 | - | Detail |
| C2H9g14095 | 9:12,832,365-12,833,599 | + | C1H9g17171 | CX9g054998 | LOC_Os09g25410 | Os09g0421500 | - | Detail |
| C2H9g26024 | 9:12,833,957-12,836,657 | - | C1H9g16363 | CX9g055874 | LOC_Os09g25420 | Os09g0421600 | - | Detail |
| C2H9g20999 | 9:12,839,299-12,840,468 | - | C1H9g13057 | CX9g057047 | LOC_Os09g25430 | Os09g0421700 | DRG9 | Detail |
| C2H9g15585 | 9:12,843,103-12,845,436 | - | C1H9g23603 | CX9g057707 | LOC_Os09g25440 | Os09g0421800 | - | Detail |
| C2H9g18547 | 9:12,848,446-12,853,193 | - | C1H9g04652 | CX9g057935 | LOC_Os09g25460 | Os09g0422000 | - | Detail |
| C2H9g29866 | 9:12,869,407-12,873,953 | + | C1H9g01940 | CX9g055442 | LOC_Os09g25490 | Os09g0422500 | BC6, Bc6*, Bc6, OsCesA9, CESA9, OsCESA9, OS_CESA09, OsCesA 9, CesA9 | Detail |
| C2H9g13149 | 9:12,874,428-12,879,951 | - | C1H9g20433 | CX9g056791 | LOC_Os09g25500 | Os09g0422600 | - | Detail |
| C2H9g06178 | 9:12,889,719-12,893,440 | + | C1H9g21248 | CX9g057973 | LOC_Os09g25540 | Os09g0423200 | - | Detail |
| C2H9g01199 | 9:12,898,261-12,901,817 | + | C1H9g20875 | CX9g056726 | LOC_Os09g25550 | Os09g0423300 | - | Detail |
| C2H9g29489 | 9:12,902,678-12,907,732 | + | C1H9g17046 | CX9g056113 | LOC_Os09g25560 | Os09g0423400 | - | Detail |
| C2H9g01038 | 9:12,913,253-12,915,480 | + | C1H9g03392 | CX9g057440 | LOC_Os09g25570 | Os09g0423500 | - | Detail |
| C2H9g24507 | 9:12,917,396-12,924,317 | - | C1H9g16029 | CX9g057486 | LOC_Os09g25580 | Os09g0423600 | - | Detail |
| C2H9g10831 | 9:12,926,262-12,928,245 | + | C1H9g26575 | CX9g055033 | LOC_Os09g25590 | Os09g0423700 | - | Detail |
| C2H9g19598 | 9:12,932,780-12,935,194 | + | C1H9g05792 | CX9g056085 | - | Os09g0423800 | - | Detail |
| C2H9g25061 | 9:12,936,412-12,936,990 | + | C1H9g02235 | CX9g056085 | - | Os09g0423800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023186 | 2:3,545,174-3,548,115 | - | C1H2g13410 | C2H2g04831 | LOC_Os02g07850 | Os02g0175200 | - | Detail |
| CX2g019528 | 2:3,552,577-3,559,640 | + | C1H2g02033 | C2H2g15931 | LOC_Os02g07870 | Os02g0175400 | - | Detail |
| CX2g019472 | 2:3,562,394-3,566,441 | + | C1H2g00289 | C2H6g29640 | LOC_Os02g07880 | Os02g0175500 | - | Detail |
| CX2g020001 | 2:3,567,888-3,568,214 | + | - | - | - | Os02g0510400 | - | Detail |
| CX2g023543 | 2:3,571,149-3,571,595 | + | C1H2g00014 | - | LOC_Os02g07890 | Os02g0175600 | - | Detail |
| CX2g019494 | 2:3,572,407-3,576,219 | - | C1H2g07080 | C2H2g23705 | LOC_Os02g07900 | Os02g0175700 | OsANTH3 | Detail |
| CX2g023593 | 2:3,577,476-3,577,760 | + | C1H2g29388 | C2H2g17525 | LOC_Os02g07910 | Os02g0175800 | - | Detail |
| CX2g020425 | 2:3,580,910-3,583,185 | - | C1H2g08053 | C2H2g13326 | LOC_Os02g07920 | Os02g0175900 | - | Detail |
| CX2g024012 | 2:3,588,816-3,589,484 | - | C1H2g09013 | C2H2g12429 | LOC_Os02g07930 | Os02g0176000 | - | Detail |
| CX2g024713 | 2:3,606,740-3,616,365 | - | C1H2g28078 | C2H2g10282 | LOC_Os02g07960 | Os02g0176100 | - | Detail |
| CX2g018896 | 2:3,626,039-3,626,278 | + | - | - | - | Os02g0176300 | - | Detail |
| CX2g023070 | 2:3,627,315-3,628,343 | - | C1H2g25304 | C2H2g27167 | LOC_Os02g07980 | Os02g0176400 | - | Detail |
| CX2g023980 | 2:3,640,275-3,652,430 | - | C1H2g10513 | C2H2g16155 | LOC_Os02g08010 | Os02g0176700 | OsACA9 | Detail |
| CX2g022492 | 2:3,665,149-3,665,355 | + | - | - | - | - | - | Detail |
| CX2g022339 | 2:3,667,385-3,670,116 | - | C1H2g25148 | C2H2g22723 | LOC_Os02g08030 | Os02g0176900 | - | Detail |
| CX2g023491 | 2:3,675,862-3,676,538 | + | - | - | - | - | - | Detail |
| CX2g022848 | 2:3,687,090-3,690,618 | + | C1H2g16100 | C2H2g01390 | LOC_Os02g08070 | Os02g0177300 | - | Detail |
| CX2g024774 | 2:3,700,751-3,701,924 | - | C1H2g15920 | C2H2g10970 | LOC_Os02g08080 | Os02g0177400 | - | Detail |
| CX2g020793 | 2:3,705,318-3,706,317 | - | C1H2g27198 | C2H2g24704 | LOC_Os02g08090 | Os02g0177500 | - | Detail |
| CX2g022957 | 2:3,714,531-3,719,487 | + | C1H2g08951 | C2H2g12631 | LOC_Os02g08100 | Os02g0177600 | 4CL3, Os4CL3 | Detail |