| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g11165 | 1:34,773,025-34,777,269 | - | C2H1g18397 | CX1g002071 | LOC_Os01g67570 | Os01g0901900 | OsPAP3 | Detail |
| C1H1g07120 | 1:34,778,425-34,784,227 | - | C2H1g27175 | CX1g003005 | LOC_Os01g67580 | Os01g0902100 | - | Detail |
| C1H1g07945 | 1:34,790,251-34,797,298 | + | C2H1g01159 | CX1g002834 | LOC_Os01g67590 | Os01g0902200 | - | Detail |
| C1H1g09859 | 1:34,797,780-34,800,787 | - | C2H1g09953 | CX1g004278 | LOC_Os01g67600 | Os01g0902300 | - | Detail |
| C1H1g10919 | 1:34,805,838-34,809,077 | + | C2H1g21673 | CX1g003173 | LOC_Os01g67630 | Os01g0902700 | - | Detail |
| C1H1g02991 | 1:34,811,665-34,815,094 | + | C2H1g11697 | CX1g000416 | LOC_Os01g67640 | Os01g0902800 | - | Detail |
| C1H1g01517 | 1:34,823,535-34,824,056 | - | C2H1g22514 | CX1g005371 | LOC_Os01g67650 | Os01g0842200 | - | Detail |
| C1H1g12112 | 1:34,836,018-34,841,313 | - | C2H1g29533 | CX1g006854 | LOC_Os01g67720 | Os01g0904200 | - | Detail |
| C1H1g23804 | 1:34,841,658-34,843,649 | + | C2H1g19214 | CX1g003334 | LOC_Os01g67730 | Os01g0904300 | - | Detail |
| C1H1g23062 | 1:34,844,136-34,855,737 | - | C2H1g10276 | CX1g000154 | LOC_Os01g67740 | Os01g0904400 | - | Detail |
| C1H1g02720 | 1:34,856,447-34,861,170 | - | C2H1g16992 | CX1g001313 | LOC_Os01g67750 | Os01g0904500 | - | Detail |
| C1H1g03400 | 1:34,863,899-34,867,437 | - | C2H1g05837 | CX1g004760 | LOC_Os01g67770 | Os01g0904700 | RR26, OsRR26, Rrb6, Orr6, OsRR16, OsRRB6 | Detail |
| C1H1g01129 | 1:34,879,834-34,882,041 | + | C2H1g29165 | CX1g000275 | LOC_Os01g67810 | Os01g0905200 | - | Detail |
| C1H1g31042 | 1:34,883,497-34,885,551 | + | C2H1g16521 | CX1g001652 | LOC_Os01g67820 | Os01g0905300 | - | Detail |
| C1H1g11384 | 1:34,887,397-34,890,680 | - | C2H1g29056 | CX1g000161 | LOC_Os01g67830 | Os01g0905400 | - | Detail |
| C1H1g03018 | 1:34,898,864-34,901,431 | + | C2H1g13823 | CX1g004783 | LOC_Os01g67850 | Os01g0905700 | - | Detail |
| C1H1g11811 | 1:34,902,974-34,905,313 | - | C2H1g10330 | CX1g001709 | LOC_Os01g67860 | Os01g0905800 | - | Detail |
| C1H1g06073 | 1:34,908,202-34,913,331 | - | C2H1g06722 | CX1g001709 | LOC_Os01g67870 | Os01g0906000 | - | Detail |
| C1H1g19357 | 1:34,917,371-34,926,277 | - | C2H1g09299 | CX1g002463 | LOC_Os01g67880 | Os01g0906200 | - | Detail |
| C1H1g19297 | 1:34,929,626-34,935,695 | - | C2H1g18200 | CX1g003860 | LOC_Os01g67920 | Os01g0906600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023186 | 2:3,545,174-3,548,115 | - | C1H2g13410 | C2H2g04831 | LOC_Os02g07850 | Os02g0175200 | - | Detail |
| CX2g019528 | 2:3,552,577-3,559,640 | + | C1H2g02033 | C2H2g15931 | LOC_Os02g07870 | Os02g0175400 | - | Detail |
| CX2g019472 | 2:3,562,394-3,566,441 | + | C1H2g00289 | C2H6g29640 | LOC_Os02g07880 | Os02g0175500 | - | Detail |
| CX2g020001 | 2:3,567,888-3,568,214 | + | - | - | - | Os02g0510400 | - | Detail |
| CX2g023543 | 2:3,571,149-3,571,595 | + | C1H2g00014 | - | LOC_Os02g07890 | Os02g0175600 | - | Detail |
| CX2g019494 | 2:3,572,407-3,576,219 | - | C1H2g07080 | C2H2g23705 | LOC_Os02g07900 | Os02g0175700 | OsANTH3 | Detail |
| CX2g023593 | 2:3,577,476-3,577,760 | + | C1H2g29388 | C2H2g17525 | LOC_Os02g07910 | Os02g0175800 | - | Detail |
| CX2g020425 | 2:3,580,910-3,583,185 | - | C1H2g08053 | C2H2g13326 | LOC_Os02g07920 | Os02g0175900 | - | Detail |
| CX2g024012 | 2:3,588,816-3,589,484 | - | C1H2g09013 | C2H2g12429 | LOC_Os02g07930 | Os02g0176000 | - | Detail |
| CX2g024713 | 2:3,606,740-3,616,365 | - | C1H2g28078 | C2H2g10282 | LOC_Os02g07960 | Os02g0176100 | - | Detail |
| CX2g018896 | 2:3,626,039-3,626,278 | + | - | - | - | Os02g0176300 | - | Detail |
| CX2g023070 | 2:3,627,315-3,628,343 | - | C1H2g25304 | C2H2g27167 | LOC_Os02g07980 | Os02g0176400 | - | Detail |
| CX2g023980 | 2:3,640,275-3,652,430 | - | C1H2g10513 | C2H2g16155 | LOC_Os02g08010 | Os02g0176700 | OsACA9 | Detail |
| CX2g022492 | 2:3,665,149-3,665,355 | + | - | - | - | - | - | Detail |
| CX2g022339 | 2:3,667,385-3,670,116 | - | C1H2g25148 | C2H2g22723 | LOC_Os02g08030 | Os02g0176900 | - | Detail |
| CX2g023491 | 2:3,675,862-3,676,538 | + | - | - | - | - | - | Detail |
| CX2g022848 | 2:3,687,090-3,690,618 | + | C1H2g16100 | C2H2g01390 | LOC_Os02g08070 | Os02g0177300 | - | Detail |
| CX2g024774 | 2:3,700,751-3,701,924 | - | C1H2g15920 | C2H2g10970 | LOC_Os02g08080 | Os02g0177400 | - | Detail |
| CX2g020793 | 2:3,705,318-3,706,317 | - | C1H2g27198 | C2H2g24704 | LOC_Os02g08090 | Os02g0177500 | - | Detail |
| CX2g022957 | 2:3,714,531-3,719,487 | + | C1H2g08951 | C2H2g12631 | LOC_Os02g08100 | Os02g0177600 | 4CL3, Os4CL3 | Detail |