| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g11764 | 3:10,956,693-10,961,163 | - | C2H3g10583 | CX3g025440 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| C1H3g02450 | 3:10,968,065-10,973,057 | + | C2H3g24190 | CX3g027316 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| C1H3g13994 | 3:10,973,249-10,978,463 | - | C2H3g30311 | CX3g028180 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| C1H3g12459 | 3:10,978,644-10,988,938 | + | C2H3g26938 | CX3g029941 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| C1H3g29664 | 3:10,990,193-10,992,877 | + | C2H3g19269 | CX3g028103 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| C1H3g30788 | 3:10,997,102-11,001,582 | + | C2H3g24047 | CX3g028855 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| C1H3g06087 | 3:11,002,110-11,002,616 | + | C2H3g24886 | CX3g028002 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| C1H3g12764 | 3:11,005,642-11,009,575 | - | C2H3g01911 | CX3g030167 | LOC_Os03g21620 | Os03g0333500 | - | Detail |
| C1H3g24732 | 3:11,012,916-11,019,204 | + | C2H3g06072 | CX3g030080 | LOC_Os03g21630 | Os03g0334100 | - | Detail |
| C1H3g12242 | 3:11,021,498-11,024,991 | + | C2H3g19486 | CX3g025988 | LOC_Os03g21640 | Os03g0334200 | - | Detail |
| C1H3g12872 | 3:11,025,887-11,026,351 | - | C2H3g01471 | CX3g025425 | LOC_Os03g21650 | Os03g0334300 | - | Detail |
| C1H3g04089 | 3:11,049,298-11,055,428 | + | C2H3g23114 | CX3g028192 | LOC_Os03g21680 | Os03g0334700 | - | Detail |
| C1H3g19863 | 3:11,055,512-11,060,664 | - | C2H3g29675 | CX3g026146 | LOC_Os03g21690 | Os03g0334800 | - | Detail |
| C1H3g05344 | 3:11,063,303-11,064,574 | + | C2H3g22866 | CX3g026406 | LOC_Os03g21700 | Os03g0335100 | - | Detail |
| C1H3g04080 | 3:11,069,158-11,070,960 | + | C2H3g03886 | CX3g025256 | LOC_Os03g21710 | Os03g0335200 | - | Detail |
| C1H3g28568 | 3:11,077,899-11,078,735 | - | - | - | - | - | - | Detail |
| C1H3g16339 | 3:11,078,444-11,078,689 | + | C2H3g08004 | CX3g030092 | - | Os07g0676800 | - | Detail |
| C1H3g19042 | 3:11,081,184-11,087,685 | + | C2H3g20974 | CX3g026559 | LOC_Os03g21720 | Os03g0335300 | - | Detail |
| C1H3g07741 | 3:11,090,089-11,093,974 | + | C2H3g19361 | CX3g030985 | LOC_Os03g21730 | Os03g0335500 | - | Detail |
| C1H3g12959 | 3:11,104,908-11,115,051 | - | C2H3g14995 | CX3g025822 | LOC_Os03g02100 | Os03g0694900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003467 | 1:9,004,239-9,006,025 | - | C1H1g23312 | C2H1g07964 | LOC_Os01g17470 | Os01g0281600 | - | Detail |
| CX1g001456 | 1:9,009,649-9,011,187 | - | C1H1g09161 | C2H1g20962 | - | - | - | Detail |
| CX1g005877 | 1:9,016,468-9,016,623 | - | - | - | - | - | - | Detail |
| CX1g006919 | 1:9,026,678-9,029,838 | + | C1H1g00974 | C2H1g22929 | LOC_Os01g17990 | - | - | Detail |
| CX1g000239 | 1:9,052,515-9,056,036 | - | C1H1g19330 | C2H1g07113 | LOC_Os01g18050 | Os01g0282800 | OsTUB1 | Detail |
| CX1g006009 | 1:9,060,306-9,060,497 | - | - | - | - | - | - | Detail |
| CX1g003294 | 1:9,066,224-9,070,718 | - | C1H1g12917 | C2H1g14204 | LOC_Os01g18060 | Os01g0283000 | - | Detail |
| CX1g007053 | 1:9,070,738-9,075,303 | + | C1H1g28761 | C2H1g26601 | LOC_Os01g18070 | Os01g0283100 | - | Detail |
| CX1g006809 | 1:9,087,743-9,088,417 | - | - | - | - | - | - | Detail |
| CX1g005891 | 1:9,090,021-9,090,368 | + | - | C2H1g29322 | LOC_Os01g18090 | Os01g0283400 | - | Detail |
| CX1g005282 | 1:9,091,468-9,093,481 | - | C1H1g04332 | C2H1g04439 | LOC_Os01g18100 | Os01g0283500 | - | Detail |
| CX1g001578 | 1:9,101,523-9,103,440 | + | C1H1g15010 | C2H1g27306 | LOC_Os01g18110 | Os01g0283600 | - | Detail |
| CX1g004859 | 1:9,103,802-9,104,476 | - | - | - | - | - | - | Detail |
| CX1g006584 | 1:9,109,541-9,109,897 | - | - | - | LOC_Os05g35980 | Os12g0444500 | - | Detail |
| CX1g006385 | 1:9,110,761-9,110,970 | - | C1H1g08875 | C2H1g06247 | - | Os05g0435500 | - | Detail |
| CX1g005965 | 1:9,113,187-9,116,532 | + | C1H1g15010 | C2H1g27708 | LOC_Os01g18120 | Os01g0283700 | - | Detail |
| CX1g005156 | 1:9,121,172-9,122,281 | + | C1H1g31050 | C2H1g22354 | LOC_Os01g18150 | Os01g0284300 | - | Detail |
| CX1g003906 | 1:9,122,467-9,122,640 | - | - | - | - | - | - | Detail |
| CX1g002731 | 1:9,124,247-9,125,016 | - | C1H1g09627 | C2H1g13905 | LOC_Os01g18170 | Os01g0284500 | OsGER4 | Detail |
| CX1g000924 | 1:9,132,438-9,135,129 | + | C1H1g10680 | C2H1g17254 | LOC_Os01g18210 | Os01g0284700 | - | Detail |