| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g24172 | 7:24,556,114-24,559,156 | - | - | CX7g047079 | - | - | - | Detail |
| C2H7g19394 | 7:24,559,801-24,561,552 | + | C1H7g14309 | CX3g027341 | LOC_Os07g49250 | Os07g0693100 | - | Detail |
| C2H7g18291 | 7:24,565,826-24,582,082 | + | C1H7g28070 | CX7g048782 | LOC_Os07g49270 | Os07g0693500 | - | Detail |
| C2H7g00587 | 7:24,582,222-24,586,934 | - | C1H7g12596 | CX7g046134 | LOC_Os07g49280 | Os07g0693600 | - | Detail |
| C2H7g28926 | 7:24,588,612-24,591,329 | - | C1H7g23269 | CX7g050224 | LOC_Os07g49290 | Os07g0173300 | qCTB7 | Detail |
| C2H7g26555 | 7:24,591,036-24,600,013 | + | C1H7g28065 | CX7g048290 | LOC_Os07g49300 | Os07g0693700 | - | Detail |
| C2H7g16809 | 7:24,600,670-24,603,092 | + | C1H7g30527 | CX7g046443 | LOC_Os07g49310 | Os07g0693800 | - | Detail |
| C2H7g22468 | 7:24,603,997-24,615,323 | + | C1H7g02758 | CX7g047911 | LOC_Os07g49320 | Os07g0693900 | - | Detail |
| C2H7g03488 | 7:24,615,713-24,618,783 | - | C1H7g23813 | CX7g049802 | LOC_Os07g49330 | Os07g0694000 | - | Detail |
| C2H7g11947 | 7:24,633,546-24,639,198 | - | C1H7g04846 | CX7g048511 | LOC_Os07g49370 | Os07g0694400 | OsIRX9, OsGT43C, OsGT43C/OsIRX9 | Detail |
| C2H7g21515 | 7:24,642,065-24,644,238 | + | C1H7g04330 | CX7g048246 | LOC_Os07g49380 | Os07g0694500 | - | Detail |
| C2H7g10645 | 7:24,645,075-24,648,493 | - | C1H7g06499 | CX7g048998 | LOC_Os07g49390 | Os07g0694600 | PDT | Detail |
| C2H7g29269 | 7:24,650,119-24,652,386 | - | C1H7g10754 | CX7g047831 | LOC_Os07g49400 | Os07g0694700 | APX2, OsAPX2, APXb | Detail |
| C2H7g08373 | 7:24,655,506-24,659,432 | - | C1H7g15269 | CX7g048258 | LOC_Os07g49410 | Os07g0694800 | - | Detail |
| C2H7g00903 | 7:24,667,339-24,679,657 | + | C1H7g06766 | CX7g048455 | LOC_Os07g49460 | Os07g0695100 | - | Detail |
| C2H7g12209 | 7:24,681,424-24,683,990 | + | C1H7g28034 | CX7g048022 | LOC_Os07g49470 | Os07g0695300 | - | Detail |
| C2H7g20370 | 7:24,684,099-24,688,611 | - | C1H7g26360 | CX7g049781 | LOC_Os07g49480 | Os07g0695400 | - | Detail |
| C2H7g29735 | 7:24,691,115-24,693,002 | + | C1H7g08926 | CX7g047215 | LOC_Os07g49510 | Os07g0695700 | - | Detail |
| C2H7g12536 | 7:24,695,021-24,700,738 | + | C1H7g03312 | CX7g046226 | LOC_Os07g49520 | Os07g0695800 | - | Detail |
| C2H7g18867 | 7:24,701,575-24,702,051 | + | C1H7g12414 | CX7g046250 | LOC_Os07g49530 | Os07g0695900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022301 | 2:3,415,995-3,418,938 | + | C1H2g07152 | C2H2g24641 | LOC_Os02g07650 | Os02g0172800 | - | Detail |
| CX2g019400 | 2:3,420,683-3,420,835 | + | - | - | - | - | - | Detail |
| CX2g024836 | 2:3,434,127-3,436,752 | - | C1H2g22189 | C2H2g24824 | LOC_Os02g07670 | Os02g0173000 | - | Detail |
| CX2g022349 | 2:3,437,845-3,443,328 | + | C1H2g28731 | C2H2g00550 | LOC_Os02g07680 | Os02g0173100 | - | Detail |
| CX2g022750 | 2:3,450,258-3,450,938 | + | C1H2g03899 | - | LOC_Os02g07690 | Os02g0173200 | - | Detail |
| CX2g021850 | 2:3,457,934-3,461,586 | + | C1H2g05749 | C2H2g04564 | LOC_Os02g07720 | Os02g0173500 | - | Detail |
| CX2g022008 | 2:3,464,788-3,466,196 | + | C1H2g20583 | C2H2g25488 | LOC_Os02g07730 | Os02g0173600 | - | Detail |
| CX2g022408 | 2:3,466,858-3,470,763 | + | C1H2g11719 | C2H2g25277 | LOC_Os02g07740 | Os02g0173700 | - | Detail |
| CX2g019306 | 2:3,471,337-3,474,626 | - | C1H2g13144 | C2H2g05358 | LOC_Os02g07750 | Os02g0173800 | - | Detail |
| CX2g022443 | 2:3,477,304-3,484,552 | + | C1H2g30476 | C2H2g15147 | LOC_Os02g07760 | Os02g0173900 | - | Detail |
| CX2g021568 | 2:3,490,424-3,492,682 | - | C1H2g17525 | C2H2g30059 | LOC_Os02g07770 | Os02g0174000 | OsAPL | Detail |
| CX2g018842 | 2:3,504,157-3,507,660 | + | C1H2g14780 | C2H2g18280 | LOC_Os02g07780 | Os02g0174100 | - | Detail |
| CX2g023354 | 2:3,508,961-3,510,938 | - | C1H2g27768 | C2H2g26229 | LOC_Os02g07790 | Os02g0174200 | OsDPK2 | Detail |
| CX2g022416 | 2:3,513,091-3,515,620 | + | C1H2g30350 | C2H2g20308 | LOC_Os02g07800 | Os02g0174300 | - | Detail |
| CX2g024880 | 2:3,516,502-3,519,235 | + | C1H2g08878 | C2H2g01221 | LOC_Os02g07810 | Os02g0174400 | - | Detail |
| CX2g020489 | 2:3,521,786-3,522,016 | + | - | - | - | Os02g0174500 | - | Detail |
| CX2g023598 | 2:3,526,392-3,527,948 | + | C1H2g02250 | C2H2g00728 | LOC_Os02g07820 | Os02g0174800 | - | Detail |
| CX2g023627 | 2:3,533,755-3,535,941 | + | C1H2g14484 | C2H2g16638 | LOC_Os02g07830 | Os02g0175000 | HKT6, OsHKT6, OsHKT1;3 | Detail |
| CX2g022925 | 2:3,536,481-3,538,268 | + | - | - | - | - | - | Detail |
| CX2g020712 | 2:3,541,775-3,544,716 | + | C1H2g18593 | C2H2g09018 | LOC_Os02g07840 | Os02g0175100 | RISBZ4 | Detail |