| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g25457 | 1:6,267,010-6,270,542 | + | C2H1g18702 | CX1g001842 | LOC_Os01g12730 | Os01g0227300 | - | Detail |
| C1H1g25274 | 1:6,271,279-6,273,273 | + | C2H1g07843 | CX1g005082 | LOC_Os01g12740 | Os01g0227400 | - | Detail |
| C1H1g23728 | 1:6,276,049-6,279,054 | + | C2H1g27903 | CX1g001031 | LOC_Os01g12750 | Os01g0227500 | - | Detail |
| C1H1g29841 | 1:6,285,241-6,286,257 | + | C2H1g07762 | CX1g001031 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C1H1g01201 | 1:6,286,367-6,286,993 | + | C2H1g29591 | CX1g005082 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C1H1g24596 | 1:6,289,912-6,291,847 | + | C2H1g07697 | CX1g001031 | LOC_Os01g12760 | Os01g0227700 | - | Detail |
| C1H1g05848 | 1:6,294,568-6,296,640 | + | C2H1g22175 | CX1g005082 | LOC_Os01g12770 | Os01g0227800 | - | Detail |
| C1H1g29762 | 1:6,303,881-6,307,552 | + | C2H1g18144 | CX1g005755 | LOC_Os01g12790 | Os01g0228200 | - | Detail |
| C1H1g00126 | 1:6,308,090-6,310,983 | - | C2H1g23747 | CX1g000008 | LOC_Os01g12800 | Os01g0228300 | - | Detail |
| C1H1g09783 | 1:6,314,792-6,316,924 | + | C2H1g03627 | CX1g001945 | LOC_Os01g12810 | Os01g0228400 | - | Detail |
| C1H1g01893 | 1:6,317,573-6,319,078 | - | C2H1g17734 | CX1g000835 | LOC_Os01g12820 | Os01g0228500 | - | Detail |
| C1H1g19893 | 1:6,321,348-6,324,876 | - | C2H1g24769 | CX1g004836 | LOC_Os01g12830 | Os01g0228600 | - | Detail |
| C1H1g14653 | 1:6,327,914-6,332,297 | - | C2H1g00699 | CX1g001640 | LOC_Os01g12840 | Os01g0228800 | - | Detail |
| C1H1g26396 | 1:6,340,638-6,348,492 | + | C2H1g15617 | CX1g006490 | LOC_Os01g12860 | Os01g0229000 | - | Detail |
| C1H1g13199 | 1:6,350,226-6,353,655 | - | C2H1g03922 | CX1g006720 | LOC_Os01g12870 | Os01g0229100 | - | Detail |
| C1H1g07711 | 1:6,353,950-6,354,531 | - | C2H1g15811 | - | - | - | - | Detail |
| C1H1g15790 | 1:6,353,989-6,362,163 | + | C2H1g14330 | CX1g003875 | LOC_Os01g12880 | Os01g0229200 | - | Detail |
| C1H1g29443 | 1:6,385,471-6,391,253 | + | C2H1g05009 | CX1g001622 | LOC_Os01g12890 | Os01g0229300 | CCP1, OsEMF1, DFO1, EMF1 | Detail |
| C1H1g08244 | 1:6,391,697-6,393,900 | - | C2H1g10198 | CX1g003284 | LOC_Os01g12900 | Os01g0229400 | RAC1, OsRAC1, OsRac1, Os Rac1 | Detail |
| C1H1g30145 | 1:6,400,300-6,402,272 | + | C2H1g13210 | CX1g003413 | LOC_Os01g12910 | Os01g0229500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022301 | 2:3,415,995-3,418,938 | + | C1H2g07152 | C2H2g24641 | LOC_Os02g07650 | Os02g0172800 | - | Detail |
| CX2g019400 | 2:3,420,683-3,420,835 | + | - | - | - | - | - | Detail |
| CX2g024836 | 2:3,434,127-3,436,752 | - | C1H2g22189 | C2H2g24824 | LOC_Os02g07670 | Os02g0173000 | - | Detail |
| CX2g022349 | 2:3,437,845-3,443,328 | + | C1H2g28731 | C2H2g00550 | LOC_Os02g07680 | Os02g0173100 | - | Detail |
| CX2g022750 | 2:3,450,258-3,450,938 | + | C1H2g03899 | - | LOC_Os02g07690 | Os02g0173200 | - | Detail |
| CX2g021850 | 2:3,457,934-3,461,586 | + | C1H2g05749 | C2H2g04564 | LOC_Os02g07720 | Os02g0173500 | - | Detail |
| CX2g022008 | 2:3,464,788-3,466,196 | + | C1H2g20583 | C2H2g25488 | LOC_Os02g07730 | Os02g0173600 | - | Detail |
| CX2g022408 | 2:3,466,858-3,470,763 | + | C1H2g11719 | C2H2g25277 | LOC_Os02g07740 | Os02g0173700 | - | Detail |
| CX2g019306 | 2:3,471,337-3,474,626 | - | C1H2g13144 | C2H2g05358 | LOC_Os02g07750 | Os02g0173800 | - | Detail |
| CX2g022443 | 2:3,477,304-3,484,552 | + | C1H2g30476 | C2H2g15147 | LOC_Os02g07760 | Os02g0173900 | - | Detail |
| CX2g021568 | 2:3,490,424-3,492,682 | - | C1H2g17525 | C2H2g30059 | LOC_Os02g07770 | Os02g0174000 | OsAPL | Detail |
| CX2g018842 | 2:3,504,157-3,507,660 | + | C1H2g14780 | C2H2g18280 | LOC_Os02g07780 | Os02g0174100 | - | Detail |
| CX2g023354 | 2:3,508,961-3,510,938 | - | C1H2g27768 | C2H2g26229 | LOC_Os02g07790 | Os02g0174200 | OsDPK2 | Detail |
| CX2g022416 | 2:3,513,091-3,515,620 | + | C1H2g30350 | C2H2g20308 | LOC_Os02g07800 | Os02g0174300 | - | Detail |
| CX2g024880 | 2:3,516,502-3,519,235 | + | C1H2g08878 | C2H2g01221 | LOC_Os02g07810 | Os02g0174400 | - | Detail |
| CX2g020489 | 2:3,521,786-3,522,016 | + | - | - | - | Os02g0174500 | - | Detail |
| CX2g023598 | 2:3,526,392-3,527,948 | + | C1H2g02250 | C2H2g00728 | LOC_Os02g07820 | Os02g0174800 | - | Detail |
| CX2g023627 | 2:3,533,755-3,535,941 | + | C1H2g14484 | C2H2g16638 | LOC_Os02g07830 | Os02g0175000 | HKT6, OsHKT6, OsHKT1;3 | Detail |
| CX2g022925 | 2:3,536,481-3,538,268 | + | - | - | - | - | - | Detail |
| CX2g020712 | 2:3,541,775-3,544,716 | + | C1H2g18593 | C2H2g09018 | LOC_Os02g07840 | Os02g0175100 | RISBZ4 | Detail |