| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05622 | 3:28,346,036-28,348,511 | - | C1H3g17674 | CX3g025807 | LOC_Os03g53970 | Os03g0750900 | - | Detail |
| C2H3g27227 | 3:28,354,593-28,355,389 | + | C1H3g30640 | CX3g029898 | LOC_Os03g53980 | Os03g0751000 | - | Detail |
| C2H3g03528 | 3:28,356,604-28,357,468 | - | C1H3g24232 | CX3g026633 | LOC_Os03g61780 | Os03g0221500 | - | Detail |
| C2H3g12979 | 3:28,359,296-28,363,917 | + | C1H3g23380 | CX3g029143 | LOC_Os03g53990 | Os03g0751050 | - | Detail |
| C2H3g03358 | 3:28,364,903-28,368,682 | - | C1H3g12600 | CX3g026203 | LOC_Os03g54000 | Os03g0751100 | - | Detail |
| C2H3g04810 | 3:28,374,612-28,380,038 | + | C1H3g23388 | CX3g028805 | LOC_Os03g54040 | Os03g0751400 | - | Detail |
| C2H3g04305 | 3:28,385,441-28,387,151 | + | C1H3g07489 | CX3g027092 | LOC_Os03g54050 | Os03g0751600 | - | Detail |
| C2H3g09716 | 3:28,394,981-28,400,355 | + | C1H3g19762 | CX3g030127 | LOC_Os03g54084 | Os03g0752100 | PHYC | Detail |
| C2H3g05209 | 3:28,400,892-28,404,773 | + | C1H3g25474 | CX3g031059 | LOC_Os03g54091 | Os03g0752200 | OsSPO11-1, OsTOP6A1 | Detail |
| C2H3g18265 | 3:28,406,229-28,407,037 | - | C1H3g21048 | CX3g026511 | LOC_Os03g54100 | Os03g0752300 | TPKA, TPKa, OsTPKa | Detail |
| C2H3g06363 | 3:28,414,853-28,416,272 | + | C1H3g03067 | CX3g025106 | LOC_Os03g54130 | Os03g0752500 | - | Detail |
| C2H3g21077 | 3:28,417,683-28,421,587 | + | C1H3g23694 | CX3g030009 | LOC_Os03g54150 | Os03g0752700 | - | Detail |
| C2H3g04730 | 3:28,422,062-28,426,447 | - | C1H3g26147 | CX3g031002 | LOC_Os03g54160 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| C2H3g23019 | 3:28,436,282-28,437,780 | - | C1H3g02420 | CX3g026708 | LOC_Os03g54160 | Os03g0752800 | MADS14, OsMADS14, FDRMADS6, RMADS211, AGL10, RAP1B | Detail |
| C2H3g26552 | 3:28,445,807-28,451,302 | - | C1H3g27451 | CX3g031002 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| C2H3g26951 | 3:28,451,740-28,451,928 | - | C1H3g02242 | CX3g031002 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| C2H3g17415 | 3:28,468,540-28,470,560 | - | C1H3g31832 | CX3g030268 | LOC_Os03g54190 | Os03g0753500 | - | Detail |
| C2H3g04287 | 3:28,476,444-28,478,155 | + | C1H3g27471 | CX3g026043 | - | - | - | Detail |
| C2H3g04194 | 3:28,479,652-28,483,328 | - | C1H3g27092 | CX3g027702 | LOC_Os03g54750 | Os03g0754500 | - | Detail |
| C2H3g28760 | 3:28,487,638-28,491,043 | + | C1H3g31483 | CX3g030330 | LOC_Os03g54760 | Os03g0754800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023770 | 2:2,772,953-2,777,048 | - | C1H2g00672 | C2H2g01908 | LOC_Os02g06340 | Os02g0158100 | - | Detail |
| CX2g021965 | 2:2,784,325-2,787,220 | + | C1H2g05409 | C2H2g30204 | LOC_Os02g06360 | Os02g0158300 | - | Detail |
| CX2g019280 | 2:2,788,049-2,791,849 | - | C1H2g25229 | C2H2g13787 | LOC_Os02g06370 | Os02g0158400 | - | Detail |
| CX2g024324 | 2:2,792,294-2,793,915 | - | C1H2g22174 | C2H2g21849 | LOC_Os02g06380 | Os02g0158500 | - | Detail |
| CX2g024802 | 2:2,795,472-2,797,874 | - | C1H2g12950 | C2H2g30116 | LOC_Os02g06390 | Os02g0158600 | - | Detail |
| CX2g024891 | 2:2,800,974-2,807,022 | + | C1H2g02590 | C2H2g27732 | LOC_Os02g06400 | Os02g0158800 | - | Detail |
| CX2g019701 | 2:2,807,916-2,809,811 | + | C1H2g18829 | C2H2g18736 | LOC_Os02g06410 | Os02g0158900 | - | Detail |
| CX2g018968 | 2:2,815,596-2,819,332 | + | C1H2g22018 | C2H2g14387 | LOC_Os02g06430 | Os02g0159200 | - | Detail |
| CX2g019775 | 2:2,820,671-2,821,828 | - | C1H2g27396 | - | LOC_Os02g06440 | Os02g0159250 | - | Detail |
| CX2g022334 | 2:2,822,077-2,822,414 | + | C1H2g00263 | C2H2g28953 | LOC_Os02g06450 | - | - | Detail |
| CX2g022827 | 2:2,824,164-2,827,573 | - | C1H2g18267 | C2H2g16780 | LOC_Os02g06460 | Os02g0159400 | - | Detail |
| CX2g019546 | 2:2,829,436-2,830,686 | + | C1H2g25877 | - | LOC_Os02g06470 | Os02g0159800 | - | Detail |
| CX2g022624 | 2:2,830,977-2,834,836 | - | C1H2g17971 | C2H2g05611 | LOC_Os02g06480 | Os02g0159700 | - | Detail |
| CX2g019293 | 2:2,836,116-2,839,355 | + | C1H2g16132 | C2H2g25463 | LOC_Os02g06490 | Os02g0159900 | - | Detail |
| CX2g023293 | 2:2,839,718-2,851,938 | - | C1H2g04254 | C2H2g20195 | LOC_Os02g06500 | Os02g0160000 | - | Detail |
| CX2g022086 | 2:2,857,745-2,859,401 | + | C1H2g29331 | C2H2g24612 | LOC_Os02g06520 | Os02g0160200 | - | Detail |
| CX2g019060 | 2:2,866,046-2,868,028 | + | C1H2g21526 | - | LOC_Os02g06530 | Os02g0160250 | - | Detail |
| CX2g023885 | 2:2,868,758-2,871,177 | + | C1H2g21957 | C2H2g21039 | LOC_Os02g06540 | Os02g0160400 | OsSTP9 | Detail |
| CX2g024473 | 2:2,873,427-2,873,618 | - | C1H2g15947 | - | - | Os02g0160500 | - | Detail |
| CX2g021968 | 2:2,877,548-2,877,745 | + | - | - | - | - | - | Detail |