| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g07936 | 4:3,845,979-3,846,753 | - | C2H4g19699 | CX4g031672 | LOC_Os04g09720 | Os04g0176400 | - | Detail |
| C1H4g00886 | 4:3,858,267-3,862,987 | - | C2H4g19699 | CX4g031672 | LOC_Os04g09720 | Os04g0176400 | - | Detail |
| C1H4g30482 | 4:3,907,013-3,911,500 | - | C2H4g02357 | CX4g036574 | LOC_Os04g09770 | Os04g0177000 | - | Detail |
| C1H4g18497 | 4:3,913,645-3,914,572 | - | C2H4g05769 | - | LOC_Os04g09780 | Os04g0177100 | - | Detail |
| C1H4g30399 | 4:3,921,327-3,927,118 | - | C2H4g27475 | CX4g034078 | LOC_Os04g09800 | Os04g0177300 | OsCHR735, CHR735 | Detail |
| C1H4g22479 | 4:3,929,816-3,931,810 | - | C2H4g20561 | CX4g034820 | LOC_Os04g09810 | Os04g0177400 | - | Detail |
| C1H4g23867 | 4:3,937,603-3,937,944 | + | - | CX4g036109 | - | Os04g0177500 | - | Detail |
| C1H4g19750 | 4:3,939,617-3,953,493 | - | C2H4g20320 | CX4g036116 | - | Os04g0177600 | - | Detail |
| C1H4g12052 | 4:3,967,466-3,968,321 | + | C2H4g26728 | CX4g032774 | LOC_Os04g09900 | Os04g0179700 | OsKS4, OsKSL4, OsDTS2, OsKSL1 | Detail |
| C1H4g09839 | 4:3,968,659-3,973,655 | + | C2H4g23853 | CX4g032774 | LOC_Os04g09900 | Os04g0178300 | OsCPS4, Os-CPS4, OsCyc1, OsCPSsyn | Detail |
| C1H4g28574 | 4:3,984,451-3,986,302 | - | C2H4g09237 | CX4g036126 | LOC_Os04g09920 | Os04g0178400 | CYP99A3 | Detail |
| C1H4g09507 | 4:4,009,887-4,010,539 | - | - | CX4g036382 | - | - | - | Detail |
| C1H4g30336 | 4:4,027,038-4,027,982 | - | C2H4g09020 | CX4g033846 | LOC_Os04g10000 | Os04g0179100 | - | Detail |
| C1H4g01524 | 4:4,033,530-4,034,485 | - | C2H4g10076 | CX4g035289 | LOC_Os04g10010 | Os04g0179200 | - | Detail |
| C1H4g08248 | 4:4,076,377-4,081,777 | - | C2H4g06763 | CX4g034737 | LOC_Os04g10060 | Os04g0179700 | OsKS4, OsKSL4, OsDTS2, OsKSL1 | Detail |
| C1H4g04065 | 4:4,105,075-4,106,760 | + | C2H4g06078 | CX4g034919 | LOC_Os04g10160 | Os04g0180400 | - | Detail |
| C1H4g03949 | 4:4,166,936-4,169,530 | - | C2H4g21850 | CX4g035733 | LOC_Os04g10210 | Os04g0221000 | - | Detail |
| C1H4g10325 | 4:4,175,560-4,178,590 | - | C2H4g14385 | CX4g036149 | LOC_Os04g10240 | Os04g0181100 | - | Detail |
| C1H4g30056 | 4:4,184,444-4,189,768 | - | C2H4g14846 | CX4g035099 | LOC_Os04g10260 | Os04g0181300 | - | Detail |
| C1H4g22965 | 4:4,192,377-4,193,801 | + | C2H4g02690 | CX4g035182 | LOC_Os04g10350 | Os04g0181901 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019712 | 2:2,446,794-2,447,474 | - | - | - | LOC_Os02g02660 | Os02g0118800 | - | Detail |
| CX2g018988 | 2:2,452,118-2,456,700 | + | C1H2g03887 | C2H2g28552 | LOC_Os02g05686 | Os02g0150600 | - | Detail |
| CX2g020416 | 2:2,461,532-2,465,538 | + | C1H2g03457 | C2H2g02218 | LOC_Os02g05692 | Os02g0150700 | OsDHSRP1 | Detail |
| CX2g021275 | 2:2,469,069-2,472,712 | + | C1H2g10911 | C2H2g02918 | LOC_Os02g05700 | Os02g0150800 | OsZTL1 | Detail |
| CX2g022629 | 2:2,474,396-2,475,834 | - | C1H2g16735 | C2H2g19150 | LOC_Os02g05710 | Os02g0150900 | - | Detail |
| CX2g024081 | 2:2,481,619-2,485,709 | + | C1H2g05305 | C2H2g12861 | LOC_Os02g05720 | Os02g0116100 | - | Detail |
| CX2g021128 | 2:2,486,437-2,492,302 | - | C1H2g10714 | C2H2g10999 | LOC_Os02g05730 | Os02g0151100 | - | Detail |
| CX2g019402 | 2:2,494,114-2,499,432 | - | C1H2g03046 | C2H2g14489 | LOC_Os02g05744 | Os02g0151300 | - | Detail |
| CX2g020856 | 2:2,511,204-2,516,775 | + | C1H2g11128 | C2H2g24062 | LOC_Os02g05770 | Os02g0151400 | - | Detail |
| CX2g020390 | 2:2,518,471-2,519,526 | + | C1H2g25199 | C2H2g14235 | LOC_Os02g05810 | Os02g0152200 | - | Detail |
| CX2g021034 | 2:2,522,858-2,526,956 | + | C1H2g05884 | C2H2g19146 | LOC_Os02g05820 | Os02g0152300 | - | Detail |
| CX2g020432 | 2:2,528,038-2,529,017 | + | C1H2g10224 | C2H2g26042 | LOC_Os02g05830 | Os02g0152400 | RbcS1, OsRBCS1, OsRbcS1 | Detail |
| CX2g024888 | 2:2,530,319-2,533,673 | - | C1H2g09085 | C2H2g00493 | LOC_Os02g05840 | Os02g0152500 | - | Detail |
| CX2g023920 | 2:2,536,190-2,536,387 | - | - | - | - | - | - | Detail |
| CX2g023661 | 2:2,540,796-2,545,037 | - | C1H2g06159 | C2H2g16173 | LOC_Os02g05870 | Os02g0152600 | - | Detail |
| CX2g019434 | 2:2,546,473-2,559,465 | - | C1H2g27785 | C2H2g26431 | LOC_Os02g05880 | Os02g0152700 | OsNRPE1, FEM3 | Detail |
| CX2g024806 | 2:2,564,395-2,566,276 | - | C1H2g20010 | C2H2g09396 | LOC_Os02g05890 | Os02g0152900 | YL1 | Detail |
| CX2g019870 | 2:2,567,642-2,571,801 | + | C1H2g04114 | C2H2g06285 | LOC_Os02g05900 | Os02g0153000 | - | Detail |
| CX2g023000 | 2:2,572,805-2,572,960 | + | - | - | - | - | - | Detail |
| CX2g019353 | 2:2,574,126-2,581,391 | - | C1H2g21236 | C2H2g06146 | LOC_Os02g05910 | Os02g0153100 | LRK8 | Detail |