| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g02697 | 3:29,146,935-29,148,232 | - | C1H3g22291 | CX3g030393 | LOC_Os03g44130 | Os03g0643100 | - | Detail |
| C2H3g30157 | 3:29,182,515-29,186,429 | + | C1H3g16948 | CX3g030242 | LOC_Os03g56050 | Os03g0770700 | - | Detail |
| C2H3g09554 | 3:29,189,450-29,193,329 | - | C1H3g26645 | CX3g030133 | LOC_Os03g56060 | Os03g0770800 | OsCSLC9 | Detail |
| C2H3g10825 | 3:29,202,059-29,204,348 | - | C1H3g03394 | CX3g029202 | LOC_Os03g56070 | Os03g0770900 | - | Detail |
| C2H3g08836 | 3:29,213,839-29,215,097 | - | C1H3g11674 | CX3g029828 | LOC_Os03g56090 | Os03g0771100 | OsMYB36c | Detail |
| C2H3g08036 | 3:29,224,208-29,229,435 | + | C1H3g05785 | CX3g025561 | LOC_Os03g56110 | Os03g0771500 | - | Detail |
| C2H3g12840 | 3:29,236,808-29,237,572 | + | C1H3g29067 | CX3g028014 | LOC_Os03g56160 | Os03g0772600 | - | Detail |
| C2H3g23317 | 3:29,240,167-29,240,833 | + | C1H3g22167 | CX3g028800 | LOC_Os03g56130 | Os03g0669300 | - | Detail |
| C2H3g12690 | 3:29,246,689-29,249,090 | + | C1H3g26236 | CX3g025388 | LOC_Os03g56110 | Os03g0771500 | - | Detail |
| C2H3g04290 | 3:29,249,962-29,252,512 | + | C1H3g26236 | CX3g025388 | LOC_Os03g56140 | Os03g0772100 | - | Detail |
| C2H3g11146 | 3:29,257,830-29,259,857 | + | C1H3g28844 | CX3g028014 | LOC_Os03g56160 | Os03g0772600 | - | Detail |
| C2H3g15287 | 3:29,266,625-29,269,673 | + | C1H3g06172 | CX3g028141 | LOC_Os03g56190 | Os03g0772800 | - | Detail |
| C2H3g23997 | 3:29,284,727-29,290,664 | - | C1H3g27520 | CX3g029781 | LOC_Os03g56234 | Os03g0773100 | - | Detail |
| C2H3g30456 | 3:29,293,578-29,298,161 | - | C1H3g12061 | CX3g031131 | LOC_Os03g56250 | Os03g0773300 | - | Detail |
| C2H3g15647 | 3:29,309,064-29,316,610 | + | C1H3g19745 | CX3g027730 | LOC_Os03g56260 | Os03g0773600 | - | Detail |
| C2H3g25453 | 3:29,324,576-29,328,588 | + | C1H3g13238 | CX3g029516 | LOC_Os03g56270 | Os03g0773700 | - | Detail |
| C2H3g25804 | 3:29,332,253-29,335,540 | - | C1H3g14912 | CX3g025155 | LOC_Os03g56280 | Os03g0773800 | - | Detail |
| C2H3g28843 | 3:29,337,190-29,340,498 | - | C1H3g03566 | CX3g026775 | LOC_Os03g56300 | Os03g0774200 | - | Detail |
| C2H3g04435 | 3:29,341,509-29,348,807 | - | C1H3g22996 | CX3g031127 | LOC_Os03g56310 | Os03g0774300 | - | Detail |
| C2H3g26015 | 3:29,352,008-29,354,256 | + | C1H3g19261 | CX3g025412 | LOC_Os03g56320 | Os03g0774400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019608 | 2:2,305,912-2,312,720 | + | C1H2g28134 | C2H2g07340 | LOC_Os02g05340 | Os02g0146700 | - | Detail |
| CX2g020490 | 2:2,314,213-2,315,010 | - | C1H2g16491 | C2H2g14235 | LOC_Os02g05430 | Os02g0147600 | - | Detail |
| CX2g022971 | 2:2,315,599-2,319,954 | + | C1H2g16834 | C2H2g18915 | LOC_Os02g05440 | Os02g0147100 | - | Detail |
| CX2g021512 | 2:2,322,538-2,327,206 | + | C1H2g17406 | C2H2g16746 | LOC_Os02g05450 | Os02g0147800 | - | Detail |
| CX2g019418 | 2:2,339,266-2,342,219 | + | C1H2g03103 | C2H2g05031 | LOC_Os02g05470 | Os02g0148000 | - | Detail |
| CX2g020633 | 2:2,344,249-2,346,404 | - | C1H2g11400 | C2H2g17640 | LOC_Os02g05480 | Os02g0148100 | OsMAPK14, OsMPK3, OsMAPK33 | Detail |
| CX2g019230 | 2:2,353,361-2,362,336 | + | C1H2g29322 | C2H2g26711 | LOC_Os02g05490 | Os02g0148300 | - | Detail |
| CX2g021446 | 2:2,365,038-2,366,845 | + | C1H2g28836 | C2H2g18156 | LOC_Os02g05500 | Os02g0148400 | - | Detail |
| CX2g024552 | 2:2,368,210-2,371,537 | + | C1H2g30011 | C2H2g30595 | LOC_Os02g05510 | Os02g0148500 | - | Detail |
| CX2g023405 | 2:2,372,328-2,374,624 | + | C1H2g12590 | C2H2g05427 | LOC_Os02g05520 | Os02g0148600 | - | Detail |
| CX2g020360 | 2:2,377,546-2,379,478 | - | - | - | LOC_Os02g05590 | - | - | Detail |
| CX2g022007 | 2:2,380,320-2,380,469 | - | - | - | - | - | - | Detail |
| CX2g022702 | 2:2,382,978-2,384,641 | + | C1H2g04797 | C2H2g26407 | LOC_Os02g05600 | Os02g0149500 | - | Detail |
| CX2g024920 | 2:2,389,130-2,394,169 | + | C1H2g24189 | C2H2g19048 | LOC_Os02g05610 | Os02g0149600 | - | Detail |
| CX2g022700 | 2:2,396,551-2,398,545 | - | C1H2g25609 | - | LOC_Os02g05620 | Os02g0149700 | - | Detail |
| CX2g021786 | 2:2,404,657-2,407,401 | + | C1H2g12792 | C2H2g28510 | LOC_Os02g05630 | Os02g0149800 | OsPP2C10, PP2C10, OsPP18 | Detail |
| CX2g022836 | 2:2,420,151-2,421,387 | + | C1H2g24221 | C2H2g30382 | LOC_Os02g05640 | Os02g0149900 | - | Detail |
| CX2g019305 | 2:2,423,149-2,423,478 | - | C1H2g30137 | C2H2g12819 | LOC_Os02g05650 | Os02g0150000 | - | Detail |
| CX2g019747 | 2:2,429,186-2,432,296 | - | C1H2g14077 | C2H2g16453 | LOC_Os02g05660 | Os02g0150100 | - | Detail |
| CX2g022214 | 2:2,434,455-2,435,633 | - | C1H6g14725 | - | LOC_Os02g05670 | Os02g0150200 | - | Detail |