| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09905 | 1:33,212,905-33,215,285 | + | C1H1g30307 | CX1g007080 | LOC_Os01g64890 | Os01g0869200 | OsMGT1, OsMRS2-2 | Detail |
| C2H1g24941 | 1:33,215,849-33,220,736 | - | C1H1g30705 | CX1g002156 | LOC_Os01g64900 | Os01g0869300 | - | Detail |
| C2H1g06937 | 1:33,222,337-33,229,940 | - | C1H1g03661 | CX1g002156 | LOC_Os01g64900 | - | - | Detail |
| C2H1g30680 | 1:33,234,744-33,237,160 | - | C1H1g25047 | CX1g002614 | LOC_Os01g64920 | Os01g0869500 | - | Detail |
| C2H1g14315 | 1:33,238,488-33,241,101 | + | C1H1g19257 | CX1g001436 | LOC_Os01g64930 | Os01g0869600 | - | Detail |
| C2H1g12747 | 1:33,242,499-33,245,068 | + | C1H1g00245 | CX1g002829 | LOC_Os01g64960 | Os01g0869800 | PSBS1, OsPsbS1, PsbS1 | Detail |
| C2H1g12820 | 1:33,255,690-33,260,814 | + | C1H1g27512 | CX1g001484 | LOC_Os01g64970 | Os01g0869900 | SAPK4, OsSAPK4 | Detail |
| C2H1g15095 | 1:33,261,090-33,266,609 | - | C1H1g13667 | CX1g002784 | LOC_Os01g64980 | Os01g0870100 | - | Detail |
| C2H1g23479 | 1:33,268,295-33,269,667 | - | - | - | - | - | - | Detail |
| C2H1g13430 | 1:33,269,594-33,274,107 | + | C1H1g03643 | CX1g005766 | LOC_Os01g64990 | Os01g0870201 | - | Detail |
| C2H1g08641 | 1:33,274,847-33,280,865 | + | C1H1g25940 | CX1g004934 | LOC_Os01g64990 | Os01g0870300 | OsAMT3;1 | Detail |
| C2H1g07832 | 1:33,283,118-33,285,486 | + | C1H1g14637 | CX1g001460 | LOC_Os01g65000 | Os01g0831300 | - | Detail |
| C2H1g11379 | 1:33,286,716-33,287,597 | - | C1H1g16493 | CX1g004252 | LOC_Os01g65010 | Os01g0870400 | SDRLK-16 | Detail |
| C2H1g20125 | 1:33,287,685-33,289,886 | - | C1H1g07139 | CX1g001391 | LOC_Os01g65010 | Os01g0870400 | SDRLK-16 | Detail |
| C2H1g08106 | 1:33,292,314-33,295,072 | - | C1H1g27684 | CX1g001391 | LOC_Os01g65060 | Os01g0870500 | - | Detail |
| C2H1g01248 | 1:33,299,994-33,301,349 | - | C1H1g27053 | CX1g005366 | - | Os01g0347200 | - | Detail |
| C2H1g01910 | 1:33,311,066-33,313,791 | + | C1H1g27684 | CX1g004252 | LOC_Os01g65060 | Os01g0642801 | - | Detail |
| C2H1g28915 | 1:33,315,190-33,322,033 | + | C1H1g29415 | CX1g002432 | LOC_Os01g65070 | Os01g0871100 | - | Detail |
| C2H1g00963 | 1:33,329,474-33,334,508 | + | C1H1g03641 | CX1g005777 | LOC_Os01g65090 | Os01g0871300 | - | Detail |
| C2H1g24816 | 1:33,335,144-33,336,972 | - | C1H1g20493 | CX1g000514 | LOC_Os01g65094 | Os01g0871350 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019608 | 2:2,305,912-2,312,720 | + | C1H2g28134 | C2H2g07340 | LOC_Os02g05340 | Os02g0146700 | - | Detail |
| CX2g020490 | 2:2,314,213-2,315,010 | - | C1H2g16491 | C2H2g14235 | LOC_Os02g05430 | Os02g0147600 | - | Detail |
| CX2g022971 | 2:2,315,599-2,319,954 | + | C1H2g16834 | C2H2g18915 | LOC_Os02g05440 | Os02g0147100 | - | Detail |
| CX2g021512 | 2:2,322,538-2,327,206 | + | C1H2g17406 | C2H2g16746 | LOC_Os02g05450 | Os02g0147800 | - | Detail |
| CX2g019418 | 2:2,339,266-2,342,219 | + | C1H2g03103 | C2H2g05031 | LOC_Os02g05470 | Os02g0148000 | - | Detail |
| CX2g020633 | 2:2,344,249-2,346,404 | - | C1H2g11400 | C2H2g17640 | LOC_Os02g05480 | Os02g0148100 | OsMAPK14, OsMPK3, OsMAPK33 | Detail |
| CX2g019230 | 2:2,353,361-2,362,336 | + | C1H2g29322 | C2H2g26711 | LOC_Os02g05490 | Os02g0148300 | - | Detail |
| CX2g021446 | 2:2,365,038-2,366,845 | + | C1H2g28836 | C2H2g18156 | LOC_Os02g05500 | Os02g0148400 | - | Detail |
| CX2g024552 | 2:2,368,210-2,371,537 | + | C1H2g30011 | C2H2g30595 | LOC_Os02g05510 | Os02g0148500 | - | Detail |
| CX2g023405 | 2:2,372,328-2,374,624 | + | C1H2g12590 | C2H2g05427 | LOC_Os02g05520 | Os02g0148600 | - | Detail |
| CX2g020360 | 2:2,377,546-2,379,478 | - | - | - | LOC_Os02g05590 | - | - | Detail |
| CX2g022007 | 2:2,380,320-2,380,469 | - | - | - | - | - | - | Detail |
| CX2g022702 | 2:2,382,978-2,384,641 | + | C1H2g04797 | C2H2g26407 | LOC_Os02g05600 | Os02g0149500 | - | Detail |
| CX2g024920 | 2:2,389,130-2,394,169 | + | C1H2g24189 | C2H2g19048 | LOC_Os02g05610 | Os02g0149600 | - | Detail |
| CX2g022700 | 2:2,396,551-2,398,545 | - | C1H2g25609 | - | LOC_Os02g05620 | Os02g0149700 | - | Detail |
| CX2g021786 | 2:2,404,657-2,407,401 | + | C1H2g12792 | C2H2g28510 | LOC_Os02g05630 | Os02g0149800 | OsPP2C10, PP2C10, OsPP18 | Detail |
| CX2g022836 | 2:2,420,151-2,421,387 | + | C1H2g24221 | C2H2g30382 | LOC_Os02g05640 | Os02g0149900 | - | Detail |
| CX2g019305 | 2:2,423,149-2,423,478 | - | C1H2g30137 | C2H2g12819 | LOC_Os02g05650 | Os02g0150000 | - | Detail |
| CX2g019747 | 2:2,429,186-2,432,296 | - | C1H2g14077 | C2H2g16453 | LOC_Os02g05660 | Os02g0150100 | - | Detail |
| CX2g022214 | 2:2,434,455-2,435,633 | - | C1H6g14725 | - | LOC_Os02g05670 | Os02g0150200 | - | Detail |