| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g02008 | 3:26,182,013-26,183,143 | - | C1H3g04028 | CX3g026061 | LOC_Os03g50110 | Os03g0708800 | - | Detail |
| C2H3g01107 | 3:26,185,381-26,189,613 | + | C1H3g25650 | CX3g026724 | LOC_Os03g50120 | Os03g0708900 | - | Detail |
| C2H3g12581 | 3:26,191,414-26,193,120 | - | C1H3g26419 | CX3g026549 | - | Os03g0709000 | - | Detail |
| C2H3g23367 | 3:26,194,969-26,195,175 | - | C1H3g00554 | CX3g030849 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| C2H3g12217 | 3:26,195,267-26,195,473 | - | C1H3g08833 | CX3g030849 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| C2H3g17990 | 3:26,201,153-26,203,099 | - | C1H3g00862 | CX3g027687 | LOC_Os03g50160 | Os03g0709300 | - | Detail |
| C2H3g00532 | 3:26,209,333-26,211,854 | - | C1H12g23110 | - | - | - | - | Detail |
| C2H3g22762 | 3:26,225,661-26,226,970 | + | C1H3g26800 | CX3g031286 | LOC_Os03g50210 | Os03g0710000 | - | Detail |
| C2H3g19621 | 3:26,227,851-26,230,459 | - | C1H3g31046 | CX3g026541 | LOC_Os03g50220 | - | - | Detail |
| C2H3g18554 | 3:26,231,717-26,234,922 | - | C1H3g04126 | CX3g026477 | LOC_Os03g50230 | Os03g0710100 | OsHOP2 | Detail |
| C2H3g09223 | 3:26,235,915-26,237,007 | - | C1H3g07148 | CX3g026477 | LOC_Os03g50230 | Os03g0710100 | OsHOP2 | Detail |
| C2H3g20376 | 3:26,239,365-26,242,346 | + | C1H3g05875 | CX3g028078 | LOC_Os03g50250 | Os03g0710500 | - | Detail |
| C2H3g06541 | 3:26,246,057-26,247,590 | - | C1H3g17966 | CX3g029323 | LOC_Os03g50270 | Os03g0710600 | - | Detail |
| C2H3g00310 | 3:26,250,143-26,251,759 | - | C1H3g12018 | CX3g027946 | LOC_Os03g50280 | Os03g0710700 | - | Detail |
| C2H3g13816 | 3:26,259,380-26,263,162 | + | C1H3g30860 | CX3g029821 | LOC_Os03g50290 | Os03g0710800 | GF14f, SR14-3-3 | Detail |
| C2H3g13830 | 3:26,265,796-26,273,924 | + | C1H3g01378 | CX3g029660 | LOC_Os03g50300 | Os03g0710900 | - | Detail |
| C2H3g07676 | 3:26,279,870-26,282,288 | + | C1H3g31233 | CX3g028553 | LOC_Os03g50310 | Os03g0711100 | OsCOL10, OsBBX10, OsJ, OsCCT14 | Detail |
| C2H3g02097 | 3:26,282,644-26,297,961 | - | C1H3g26509 | CX3g031158 | LOC_Os03g50320 | Os03g0711200 | - | Detail |
| C2H3g27257 | 3:26,299,995-26,307,777 | - | C1H3g08523 | CX3g026863 | LOC_Os03g50330 | Os03g0711300 | - | Detail |
| C2H3g20089 | 3:26,309,999-26,315,252 | - | C1H3g29848 | CX3g028922 | LOC_Os03g50340 | Os03g0711400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g018918 | 2:1,986,740-1,991,373 | + | C1H2g19457 | C2H2g06996 | LOC_Os02g04530 | Os02g0137900 | - | Detail |
| CX2g023632 | 2:1,995,675-1,997,798 | - | C1H2g27170 | C2H2g13981 | LOC_Os02g04540 | Os02g0138000 | - | Detail |
| CX2g021834 | 2:2,007,473-2,008,142 | + | C1H2g29564 | C2H2g01173 | LOC_Os02g04550 | Os02g0138100 | - | Detail |
| CX2g024861 | 2:2,008,795-2,011,459 | + | C1H2g18051 | C2H2g16875 | LOC_Os02g04560 | Os02g0138200 | - | Detail |
| CX2g023377 | 2:2,022,717-2,025,876 | + | C1H2g25736 | C2H2g13634 | LOC_Os02g04630 | Os02g0138900 | OsCAX4 | Detail |
| CX2g021586 | 2:2,026,430-2,028,594 | - | C1H2g19857 | C2H2g21421 | LOC_Os02g04640 | Os02g0139000 | PHR3, OsPHR3, Os-PHR3 | Detail |
| CX2g022004 | 2:2,032,940-2,035,029 | - | C1H2g25448 | C2H2g20299 | LOC_Os02g04650 | Os02g0139100 | - | Detail |
| CX2g023715 | 2:2,036,703-2,042,134 | - | C1H2g08575 | C2H2g26602 | LOC_Os02g04660 | Os02g0139200 | OsPRMT5 | Detail |
| CX2g022023 | 2:2,047,394-2,050,556 | + | C1H2g28810 | C2H2g15412 | LOC_Os02g04670 | Os02g0139300 | - | Detail |
| CX2g023374 | 2:2,054,829-2,058,365 | + | C1H2g01401 | C2H2g05396 | LOC_Os02g04680 | Os02g0139400 | OsSPL3, LCRN1 | Detail |
| CX2g024219 | 2:2,061,357-2,061,649 | + | - | - | LOC_Os02g02660 | Os02g0118800 | - | Detail |
| CX2g024475 | 2:2,074,663-2,077,446 | + | C1H2g05871 | C2H2g13142 | LOC_Os02g04700 | Os02g0139600 | - | Detail |
| CX2g022308 | 2:2,077,729-2,086,337 | - | C1H2g04817 | C2H2g16109 | LOC_Os02g04710 | Os02g0139700 | - | Detail |
| CX2g021142 | 2:2,091,538-2,103,733 | - | C1H2g30067 | C2H2g11797 | LOC_Os02g04730 | Os02g0140200 | - | Detail |
| CX2g022910 | 2:2,106,409-2,106,621 | - | - | - | - | - | - | Detail |
| CX2g024655 | 2:2,107,494-2,108,084 | + | C1H2g04160 | C2H2g18226 | LOC_Os02g04740 | Os02g0140300 | OsCNX6 | Detail |
| CX2g022746 | 2:2,113,155-2,114,480 | + | C1H2g11112 | C2H2g01233 | LOC_Os02g04780 | Os02g0140800 | - | Detail |
| CX2g022566 | 2:2,122,445-2,123,497 | - | C1H2g12714 | C2H2g14235 | LOC_Os02g04790 | Os02g0142800 | - | Detail |
| CX2g022619 | 2:2,124,784-2,126,557 | + | C1H2g06075 | C2H2g08524 | LOC_Os02g04800 | Os02g0141000 | - | Detail |
| CX2g021149 | 2:2,127,282-2,133,934 | - | C1H2g09446 | C2H2g22527 | LOC_Os02g04810 | Os02g0141100 | - | Detail |