| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g09001 | 6:2,272,854-2,274,176 | + | C1H6g29479 | CX6g042252 | LOC_Os06g06300 | Os06g0157500 | RFT1, FT-L 3, OsFTL3, FT-L3, RFT | Detail |
| C2H6g08710 | 6:2,283,559-2,284,174 | + | C1H6g06407 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C2H6g23992 | 6:2,285,513-2,285,704 | + | C1H6g09433 | CX6g045894 | LOC_Os06g06320 | Os06g0157700 | HD3A, Hd3a, FT, qHD3(t)*, FT-L 2, OsFTL2, FT-L2, FTL2 | Detail |
| C2H6g09872 | 6:2,295,836-2,296,849 | + | C1H6g29691 | CX6g041455 | LOC_Os06g06330 | Os06g0157800 | - | Detail |
| C2H6g19375 | 6:2,298,392-2,298,872 | + | C1H6g13605 | CX6g043465 | LOC_Os06g06340 | Os06g0157900 | - | Detail |
| C2H6g03223 | 6:2,300,339-2,308,133 | + | C1H6g01052 | CX6g041165 | LOC_Os06g06350 | Os06g0158000 | - | Detail |
| C2H6g20805 | 6:2,310,236-2,313,536 | + | C1H6g08202 | CX6g041162 | LOC_Os06g06360 | Os06g0158100 | OsWRKY93, OsWRKY113 | Detail |
| C2H6g18246 | 6:2,315,896-2,322,693 | + | C1H6g28677 | CX6g044558 | LOC_Os06g06370 | Os06g0158200 | - | Detail |
| C2H6g22243 | 6:2,323,220-2,329,004 | - | C1H6g07185 | CX6g044801 | LOC_Os06g06380 | Os06g0158300 | - | Detail |
| C2H6g03461 | 6:2,331,239-2,335,093 | - | C1H6g00361 | CX6g045279 | LOC_Os06g06390 | Os06g0158400 | - | Detail |
| C2H6g12842 | 6:2,336,571-2,340,132 | - | C1H6g04562 | CX6g044801 | LOC_Os06g06400 | Os06g0158500 | - | Detail |
| C2H6g18686 | 6:2,343,271-2,345,920 | - | C1H6g29953 | CX6g045460 | LOC_Os06g06410 | Os06g0158600 | - | Detail |
| C2H6g03596 | 6:2,346,287-2,348,327 | + | C1H6g03313 | - | LOC_Os06g06420 | Os06g0158700 | - | Detail |
| C2H6g00327 | 6:2,349,466-2,350,395 | + | - | CX6g044562 | LOC_Os06g06430 | Os06g0158800 | - | Detail |
| C2H6g14590 | 6:2,351,239-2,361,917 | - | C1H6g02873 | CX6g041204 | LOC_Os06g06440 | Os06g0158900 | OsMRP15, OsABCC15, OsABCC15/MRP15 | Detail |
| C2H6g19286 | 6:2,385,093-2,388,696 | + | C1H6g15545 | CX6g044205 | LOC_Os06g06450 | Os06g0159400 | - | Detail |
| C2H6g12020 | 6:2,389,673-2,390,618 | - | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160001 | - | Detail |
| C2H6g03704 | 6:2,391,602-2,395,602 | + | C1H6g14833 | CX6g044205 | LOC_Os06g06470 | Os06g0159600 | - | Detail |
| C2H6g15557 | 6:2,395,948-2,397,192 | - | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0159725 | - | Detail |
| C2H6g13339 | 6:2,405,010-2,408,929 | + | C1H6g29654 | CX6g041545 | LOC_Os06g06490 | Os06g0159900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g018918 | 2:1,986,740-1,991,373 | + | C1H2g19457 | C2H2g06996 | LOC_Os02g04530 | Os02g0137900 | - | Detail |
| CX2g023632 | 2:1,995,675-1,997,798 | - | C1H2g27170 | C2H2g13981 | LOC_Os02g04540 | Os02g0138000 | - | Detail |
| CX2g021834 | 2:2,007,473-2,008,142 | + | C1H2g29564 | C2H2g01173 | LOC_Os02g04550 | Os02g0138100 | - | Detail |
| CX2g024861 | 2:2,008,795-2,011,459 | + | C1H2g18051 | C2H2g16875 | LOC_Os02g04560 | Os02g0138200 | - | Detail |
| CX2g023377 | 2:2,022,717-2,025,876 | + | C1H2g25736 | C2H2g13634 | LOC_Os02g04630 | Os02g0138900 | OsCAX4 | Detail |
| CX2g021586 | 2:2,026,430-2,028,594 | - | C1H2g19857 | C2H2g21421 | LOC_Os02g04640 | Os02g0139000 | PHR3, OsPHR3, Os-PHR3 | Detail |
| CX2g022004 | 2:2,032,940-2,035,029 | - | C1H2g25448 | C2H2g20299 | LOC_Os02g04650 | Os02g0139100 | - | Detail |
| CX2g023715 | 2:2,036,703-2,042,134 | - | C1H2g08575 | C2H2g26602 | LOC_Os02g04660 | Os02g0139200 | OsPRMT5 | Detail |
| CX2g022023 | 2:2,047,394-2,050,556 | + | C1H2g28810 | C2H2g15412 | LOC_Os02g04670 | Os02g0139300 | - | Detail |
| CX2g023374 | 2:2,054,829-2,058,365 | + | C1H2g01401 | C2H2g05396 | LOC_Os02g04680 | Os02g0139400 | OsSPL3, LCRN1 | Detail |
| CX2g024219 | 2:2,061,357-2,061,649 | + | - | - | LOC_Os02g02660 | Os02g0118800 | - | Detail |
| CX2g024475 | 2:2,074,663-2,077,446 | + | C1H2g05871 | C2H2g13142 | LOC_Os02g04700 | Os02g0139600 | - | Detail |
| CX2g022308 | 2:2,077,729-2,086,337 | - | C1H2g04817 | C2H2g16109 | LOC_Os02g04710 | Os02g0139700 | - | Detail |
| CX2g021142 | 2:2,091,538-2,103,733 | - | C1H2g30067 | C2H2g11797 | LOC_Os02g04730 | Os02g0140200 | - | Detail |
| CX2g022910 | 2:2,106,409-2,106,621 | - | - | - | - | - | - | Detail |
| CX2g024655 | 2:2,107,494-2,108,084 | + | C1H2g04160 | C2H2g18226 | LOC_Os02g04740 | Os02g0140300 | OsCNX6 | Detail |
| CX2g022746 | 2:2,113,155-2,114,480 | + | C1H2g11112 | C2H2g01233 | LOC_Os02g04780 | Os02g0140800 | - | Detail |
| CX2g022566 | 2:2,122,445-2,123,497 | - | C1H2g12714 | C2H2g14235 | LOC_Os02g04790 | Os02g0142800 | - | Detail |
| CX2g022619 | 2:2,124,784-2,126,557 | + | C1H2g06075 | C2H2g08524 | LOC_Os02g04800 | Os02g0141000 | - | Detail |
| CX2g021149 | 2:2,127,282-2,133,934 | - | C1H2g09446 | C2H2g22527 | LOC_Os02g04810 | Os02g0141100 | - | Detail |