| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g02809 | 3:2,382,989-2,384,382 | - | C1H3g28897 | CX3g026711 | LOC_Os03g05530 | Os03g0149300 | - | Detail |
| C2H3g07135 | 3:2,384,709-2,385,099 | - | C1H3g28897 | CX3g026711 | LOC_Os03g05530 | Os03g0149300 | - | Detail |
| C2H3g29786 | 3:2,389,090-2,391,982 | + | C1H3g27908 | CX3g029578 | LOC_Os03g05540 | Os03g0149400 | - | Detail |
| C2H3g29884 | 3:2,395,079-2,395,626 | + | C1H3g00677 | - | - | - | - | Detail |
| C2H3g01040 | 3:2,400,513-2,401,439 | - | C1H3g00185 | CX3g030199 | LOC_Os03g05560 | Os03g0149700 | - | Detail |
| C2H3g29045 | 3:2,408,018-2,408,917 | - | C1H3g00155 | CX3g028233 | LOC_Os03g05570 | Os03g0149800 | - | Detail |
| C2H3g13096 | 3:2,424,730-2,425,155 | + | C1H3g19498 | CX3g030128 | LOC_Os03g05590 | Os03g0150200 | OsAP23 | Detail |
| C2H3g29028 | 3:2,427,358-2,428,983 | + | C1H3g28178 | CX3g030522 | LOC_Os03g05610 | Os03g0150500 | - | Detail |
| C2H3g30077 | 3:2,430,807-2,432,390 | - | C1H3g29432 | CX3g029750 | LOC_Os03g05620 | Os03g0150600 | - | Detail |
| C2H3g00543 | 3:2,434,580-2,435,837 | + | C1H3g22703 | - | LOC_Os03g05630 | Os03g0150700 | - | Detail |
| C2H3g05251 | 3:2,436,029-2,436,640 | + | C1H3g31371 | CX3g024968 | LOC_Os03g05630 | Os03g0150700 | - | Detail |
| C2H3g19570 | 3:2,444,751-2,445,075 | + | C1H3g21603 | - | - | Os03g0150700 | - | Detail |
| C2H3g28429 | 3:2,446,347-2,447,933 | - | C1H3g04203 | CX3g028575 | LOC_Os03g05640 | Os03g0150800 | PT2, OsPT2, PTH1-2, OsPht1;2 | Detail |
| C2H3g24713 | 3:2,452,468-2,457,529 | - | C1H3g13409 | CX3g030168 | LOC_Os03g05660 | Os03g0151100 | - | Detail |
| C2H3g23634 | 3:2,461,313-2,469,594 | + | C1H3g18077 | CX3g028756 | LOC_Os03g05680 | Os03g0151300 | Se14 | Detail |
| C2H3g25123 | 3:2,469,992-2,470,303 | - | C1H3g12618 | CX3g027574 | LOC_Os03g05700 | Os03g0151500 | - | Detail |
| C2H3g19949 | 3:2,472,091-2,472,774 | - | C1H3g18071 | CX3g029524 | LOC_Os03g05710 | Os03g0151600 | - | Detail |
| C2H3g16820 | 3:2,473,799-2,479,561 | + | C1H3g05811 | CX3g027544 | LOC_Os03g05720 | Os03g0151700 | - | Detail |
| C2H3g19649 | 3:2,480,098-2,484,362 | - | C1H3g17815 | CX3g029565 | LOC_Os03g05730 | Os03g0151800 | - | Detail |
| C2H3g15451 | 3:2,485,113-2,488,078 | - | C1H3g06798 | CX3g027324 | LOC_Os03g05740 | Os03g0151900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022112 | 2:1,616,378-1,619,392 | - | C1H2g20335 | C2H2g19617 | LOC_Os02g04010 | Os02g0133000 | - | Detail |
| CX2g024675 | 2:1,625,687-1,630,575 | + | C1H2g27472 | C2H2g07026 | LOC_Os02g04020 | Os02g0133100 | OsSec14-5 | Detail |
| CX2g019449 | 2:1,631,380-1,635,592 | - | C1H2g25242 | C2H2g19264 | LOC_Os02g04030 | Os02g0133200 | OsSec14-6 | Detail |
| CX2g024350 | 2:1,637,035-1,646,165 | - | C1H2g02951 | C2H2g26953 | LOC_Os02g04040 | Os02g0133300 | - | Detail |
| CX2g019521 | 2:1,648,528-1,659,757 | - | C1H2g30829 | C2H2g26953 | LOC_Os02g04060 | Os02g0133300 | - | Detail |
| CX2g021792 | 2:1,662,198-1,665,423 | + | C1H2g25852 | C2H2g03692 | LOC_Os02g04100 | Os02g0133800 | - | Detail |
| CX2g020909 | 2:1,666,329-1,669,732 | + | C1H2g29640 | C2H2g11013 | LOC_Os02g04110 | Os02g0133900 | - | Detail |
| CX2g022919 | 2:1,673,228-1,674,881 | + | C1H2g07358 | C2H2g11489 | LOC_Os02g04120 | Os02g0134000 | - | Detail |
| CX2g022378 | 2:1,678,004-1,678,750 | - | C1H2g13453 | C2H2g26584 | LOC_Os02g04130 | Os02g0134200 | OsSGL | Detail |
| CX2g019612 | 2:1,683,191-1,684,455 | - | C1H2g14361 | C2H2g05912 | LOC_Os02g04160 | Os02g0134300 | - | Detail |
| CX2g020443 | 2:1,689,773-1,693,480 | + | C1H2g12220 | C2H2g07293 | LOC_Os02g04170 | Os02g0134400 | - | Detail |
| CX2g019744 | 2:1,694,366-1,696,731 | - | C1H2g18448 | C2H2g22848 | LOC_Os02g04180 | Os02g0134500 | - | Detail |
| CX2g022719 | 2:1,708,500-1,710,375 | - | C1H2g26298 | C2H2g00484 | LOC_Os02g04190 | Os02g0134700 | - | Detail |
| CX2g020844 | 2:1,710,926-1,711,222 | + | C1H2g19668 | C2H2g02614 | LOC_Os02g04210 | Os02g0135000 | - | Detail |
| CX2g023797 | 2:1,714,176-1,721,417 | - | C1H2g26978 | C2H2g04317 | LOC_Os02g04230 | Os02g0135200 | OsBIMK2 | Detail |
| CX2g021229 | 2:1,722,638-1,726,546 | - | C1H2g24774 | C2H2g19192 | LOC_Os02g04240 | Os02g0135300 | WEE1 | Detail |
| CX2g019699 | 2:1,731,722-1,733,385 | + | C1H2g14128 | C2H2g25822 | LOC_Os02g04250 | Os02g0135500 | OsXAT5 | Detail |
| CX2g020779 | 2:1,738,274-1,741,231 | - | C1H2g13357 | C2H2g13436 | LOC_Os02g04260 | Os02g0135600 | - | Detail |
| CX2g022110 | 2:1,741,398-1,747,470 | + | C1H2g17615 | C2H2g01520 | LOC_Os02g04270 | Os02g0135700 | - | Detail |
| CX2g019401 | 2:1,749,430-1,750,347 | + | C1H2g06633 | - | LOC_Os02g04320 | Os02g0135800 | - | Detail |