| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g19852 | 1:27,939,465-27,941,499 | - | C2H1g24369 | CX1g001202 | - | Os01g0748100 | - | Detail |
| C1H1g12110 | 1:27,942,290-27,943,113 | - | C2H1g28384 | CX1g001852 | LOC_Os01g54430 | Os01g0748150 | - | Detail |
| C1H1g06433 | 1:27,948,211-27,948,642 | - | C2H1g16377 | CX1g005907 | LOC_Os01g54450 | Os01g0748300 | - | Detail |
| C1H1g03873 | 1:27,948,741-27,950,840 | + | C2H1g07802 | - | - | - | - | Detail |
| C1H1g15001 | 1:27,952,506-27,953,451 | - | C2H1g01977 | - | LOC_Os01g54460 | - | - | Detail |
| C1H1g03729 | 1:27,957,384-27,958,925 | + | C2H1g03618 | CX1g003919 | LOC_Os01g54470 | Os01g0748500 | - | Detail |
| C1H1g31289 | 1:27,959,205-27,962,965 | - | C2H1g11065 | CX1g002998 | LOC_Os01g54480 | Os01g0748600 | - | Detail |
| C1H1g13303 | 1:27,969,333-27,971,498 | + | C2H1g14520 | CX1g004481 | LOC_Os01g54490 | Os01g0748800 | - | Detail |
| C1H1g07195 | 1:27,976,833-27,977,195 | + | C2H1g25503 | CX1g002648 | - | - | - | Detail |
| C1H1g04026 | 1:27,977,529-27,981,091 | + | C2H1g05314 | CX1g006043 | LOC_Os01g54510 | Os01g0748900 | - | Detail |
| C1H1g06199 | 1:27,984,884-27,986,890 | + | C2H1g08416 | CX1g005528 | LOC_Os01g54515 | Os01g0748950 | OsNPF4.5 | Detail |
| C1H1g21519 | 1:27,987,165-27,988,265 | + | C2H1g22814 | CX1g000885 | LOC_Os01g54520 | Os01g0749000 | - | Detail |
| C1H1g06931 | 1:27,989,241-27,991,698 | + | C2H1g20660 | CX1g004193 | LOC_Os01g54530 | Os01g0749100 | - | Detail |
| C1H1g02075 | 1:27,992,483-27,994,856 | + | C2H1g21635 | CX1g000277 | LOC_Os01g54540 | Os01g0749200 | WLP1, cp rpl13, cp RPL13 | Detail |
| C1H1g00896 | 1:27,995,734-27,997,984 | + | C2H1g02265 | CX1g005465 | LOC_Os01g54550 | Os01g0749300 | HSFA4A, OsHsfA4a, OsHsfA4b, OsHsf-04, HSFA4B, HSF04, OsHSF9, RHSF9, HSF9 | Detail |
| C1H1g09179 | 1:27,998,928-28,003,010 | - | C2H1g14114 | CX1g003457 | LOC_Os01g54560 | Os01g0749400 | - | Detail |
| C1H1g19262 | 1:28,019,377-28,024,544 | + | C2H1g10922 | CX1g003630 | LOC_Os01g54580 | Os01g0749900 | - | Detail |
| C1H1g17809 | 1:28,028,092-28,031,780 | + | C2H1g29233 | CX1g000465 | LOC_Os01g54590 | Os01g0750000 | - | Detail |
| C1H1g24495 | 1:28,034,434-28,036,116 | - | C2H1g09211 | CX1g004996 | LOC_Os01g54600 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C1H1g00277 | 1:28,045,281-28,050,980 | + | C2H1g25863 | CX1g006527 | LOC_Os01g54620 | Os01g0750300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022112 | 2:1,616,378-1,619,392 | - | C1H2g20335 | C2H2g19617 | LOC_Os02g04010 | Os02g0133000 | - | Detail |
| CX2g024675 | 2:1,625,687-1,630,575 | + | C1H2g27472 | C2H2g07026 | LOC_Os02g04020 | Os02g0133100 | OsSec14-5 | Detail |
| CX2g019449 | 2:1,631,380-1,635,592 | - | C1H2g25242 | C2H2g19264 | LOC_Os02g04030 | Os02g0133200 | OsSec14-6 | Detail |
| CX2g024350 | 2:1,637,035-1,646,165 | - | C1H2g02951 | C2H2g26953 | LOC_Os02g04040 | Os02g0133300 | - | Detail |
| CX2g019521 | 2:1,648,528-1,659,757 | - | C1H2g30829 | C2H2g26953 | LOC_Os02g04060 | Os02g0133300 | - | Detail |
| CX2g021792 | 2:1,662,198-1,665,423 | + | C1H2g25852 | C2H2g03692 | LOC_Os02g04100 | Os02g0133800 | - | Detail |
| CX2g020909 | 2:1,666,329-1,669,732 | + | C1H2g29640 | C2H2g11013 | LOC_Os02g04110 | Os02g0133900 | - | Detail |
| CX2g022919 | 2:1,673,228-1,674,881 | + | C1H2g07358 | C2H2g11489 | LOC_Os02g04120 | Os02g0134000 | - | Detail |
| CX2g022378 | 2:1,678,004-1,678,750 | - | C1H2g13453 | C2H2g26584 | LOC_Os02g04130 | Os02g0134200 | OsSGL | Detail |
| CX2g019612 | 2:1,683,191-1,684,455 | - | C1H2g14361 | C2H2g05912 | LOC_Os02g04160 | Os02g0134300 | - | Detail |
| CX2g020443 | 2:1,689,773-1,693,480 | + | C1H2g12220 | C2H2g07293 | LOC_Os02g04170 | Os02g0134400 | - | Detail |
| CX2g019744 | 2:1,694,366-1,696,731 | - | C1H2g18448 | C2H2g22848 | LOC_Os02g04180 | Os02g0134500 | - | Detail |
| CX2g022719 | 2:1,708,500-1,710,375 | - | C1H2g26298 | C2H2g00484 | LOC_Os02g04190 | Os02g0134700 | - | Detail |
| CX2g020844 | 2:1,710,926-1,711,222 | + | C1H2g19668 | C2H2g02614 | LOC_Os02g04210 | Os02g0135000 | - | Detail |
| CX2g023797 | 2:1,714,176-1,721,417 | - | C1H2g26978 | C2H2g04317 | LOC_Os02g04230 | Os02g0135200 | OsBIMK2 | Detail |
| CX2g021229 | 2:1,722,638-1,726,546 | - | C1H2g24774 | C2H2g19192 | LOC_Os02g04240 | Os02g0135300 | WEE1 | Detail |
| CX2g019699 | 2:1,731,722-1,733,385 | + | C1H2g14128 | C2H2g25822 | LOC_Os02g04250 | Os02g0135500 | OsXAT5 | Detail |
| CX2g020779 | 2:1,738,274-1,741,231 | - | C1H2g13357 | C2H2g13436 | LOC_Os02g04260 | Os02g0135600 | - | Detail |
| CX2g022110 | 2:1,741,398-1,747,470 | + | C1H2g17615 | C2H2g01520 | LOC_Os02g04270 | Os02g0135700 | - | Detail |
| CX2g019401 | 2:1,749,430-1,750,347 | + | C1H2g06633 | - | LOC_Os02g04320 | Os02g0135800 | - | Detail |