| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g02697 | 3:29,146,935-29,148,232 | - | C1H3g22291 | CX3g030393 | LOC_Os03g44130 | Os03g0643100 | - | Detail |
| C2H3g30157 | 3:29,182,515-29,186,429 | + | C1H3g16948 | CX3g030242 | LOC_Os03g56050 | Os03g0770700 | - | Detail |
| C2H3g09554 | 3:29,189,450-29,193,329 | - | C1H3g26645 | CX3g030133 | LOC_Os03g56060 | Os03g0770800 | OsCSLC9 | Detail |
| C2H3g10825 | 3:29,202,059-29,204,348 | - | C1H3g03394 | CX3g029202 | LOC_Os03g56070 | Os03g0770900 | - | Detail |
| C2H3g08836 | 3:29,213,839-29,215,097 | - | C1H3g11674 | CX3g029828 | LOC_Os03g56090 | Os03g0771100 | OsMYB36c | Detail |
| C2H3g08036 | 3:29,224,208-29,229,435 | + | C1H3g05785 | CX3g025561 | LOC_Os03g56110 | Os03g0771500 | - | Detail |
| C2H3g12840 | 3:29,236,808-29,237,572 | + | C1H3g29067 | CX3g028014 | LOC_Os03g56160 | Os03g0772600 | - | Detail |
| C2H3g23317 | 3:29,240,167-29,240,833 | + | C1H3g22167 | CX3g028800 | LOC_Os03g56130 | Os03g0669300 | - | Detail |
| C2H3g12690 | 3:29,246,689-29,249,090 | + | C1H3g26236 | CX3g025388 | LOC_Os03g56110 | Os03g0771500 | - | Detail |
| C2H3g04290 | 3:29,249,962-29,252,512 | + | C1H3g26236 | CX3g025388 | LOC_Os03g56140 | Os03g0772100 | - | Detail |
| C2H3g11146 | 3:29,257,830-29,259,857 | + | C1H3g28844 | CX3g028014 | LOC_Os03g56160 | Os03g0772600 | - | Detail |
| C2H3g15287 | 3:29,266,625-29,269,673 | + | C1H3g06172 | CX3g028141 | LOC_Os03g56190 | Os03g0772800 | - | Detail |
| C2H3g23997 | 3:29,284,727-29,290,664 | - | C1H3g27520 | CX3g029781 | LOC_Os03g56234 | Os03g0773100 | - | Detail |
| C2H3g30456 | 3:29,293,578-29,298,161 | - | C1H3g12061 | CX3g031131 | LOC_Os03g56250 | Os03g0773300 | - | Detail |
| C2H3g15647 | 3:29,309,064-29,316,610 | + | C1H3g19745 | CX3g027730 | LOC_Os03g56260 | Os03g0773600 | - | Detail |
| C2H3g25453 | 3:29,324,576-29,328,588 | + | C1H3g13238 | CX3g029516 | LOC_Os03g56270 | Os03g0773700 | - | Detail |
| C2H3g25804 | 3:29,332,253-29,335,540 | - | C1H3g14912 | CX3g025155 | LOC_Os03g56280 | Os03g0773800 | - | Detail |
| C2H3g28843 | 3:29,337,190-29,340,498 | - | C1H3g03566 | CX3g026775 | LOC_Os03g56300 | Os03g0774200 | - | Detail |
| C2H3g04435 | 3:29,341,509-29,348,807 | - | C1H3g22996 | CX3g031127 | LOC_Os03g56310 | Os03g0774300 | - | Detail |
| C2H3g26015 | 3:29,352,008-29,354,256 | + | C1H3g19261 | CX3g025412 | LOC_Os03g56320 | Os03g0774400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023117 | 2:1,480,131-1,480,547 | - | C1H2g09748 | - | LOC_Os02g03830 | Os02g0131000 | - | Detail |
| CX2g020728 | 2:1,484,821-1,485,102 | - | - | - | - | Os02g0131050 | - | Detail |
| CX2g021664 | 2:1,488,026-1,499,033 | + | C1H2g22468 | C2H2g19848 | LOC_Os02g03840 | Os02g0131100 | - | Detail |
| CX2g022294 | 2:1,501,947-1,506,559 | - | C1H2g15765 | C2H2g29791 | LOC_Os02g03850 | Os02g0131200 | - | Detail |
| CX2g022118 | 2:1,507,158-1,510,295 | + | C1H2g24459 | C2H2g01875 | LOC_Os02g03860 | Os02g0131300 | - | Detail |
| CX2g019313 | 2:1,513,426-1,520,121 | - | C1H2g13894 | C2H2g19732 | LOC_Os02g03870 | Os02g0131400 | - | Detail |
| CX2g023899 | 2:1,525,743-1,526,135 | - | C1H2g25126 | - | - | - | - | Detail |
| CX2g022522 | 2:1,530,354-1,530,611 | + | C1H2g29540 | - | LOC_Os02g03880 | Os02g0131600 | - | Detail |
| CX2g020563 | 2:1,531,903-1,534,646 | - | C1H2g05041 | C2H2g21277 | LOC_Os02g03890 | Os02g0131700 | - | Detail |
| CX2g019095 | 2:1,536,717-1,540,530 | - | C1H2g18848 | C2H2g13835 | LOC_Os02g03900 | Os02g0131800 | NRAMP4, OsNRAMP4, Nrat1, Nramp6, OsNRAT1 | Detail |
| CX2g023698 | 2:1,542,827-1,543,948 | + | C1H2g22701 | C2H2g24840 | LOC_Os02g03910 | Os02g0130800 | - | Detail |
| CX2g019802 | 2:1,546,630-1,549,501 | - | C1H2g00924 | C2H2g22540 | LOC_Os02g03930 | Os02g0132100 | - | Detail |
| CX2g018957 | 2:1,550,189-1,553,330 | - | C1H2g01456 | C2H2g12575 | LOC_Os02g03940 | Os02g0132200 | - | Detail |
| CX2g021626 | 2:1,558,001-1,560,862 | + | C1H2g17223 | C2H2g02428 | LOC_Os02g03950 | Os02g0132300 | - | Detail |
| CX2g021994 | 2:1,572,166-1,572,660 | - | C1H2g04467 | C2H2g10653 | LOC_Os02g03960 | Os02g0132500 | OsbZIP14 | Detail |
| CX2g022870 | 2:1,580,727-1,580,921 | + | - | - | - | - | - | Detail |
| CX2g024093 | 2:1,585,140-1,593,334 | - | C1H2g04799 | C2H2g24972 | LOC_Os02g03970 | Os02g0132600 | - | Detail |
| CX2g022495 | 2:1,599,484-1,600,638 | - | C1H2g22701 | C2H2g24840 | LOC_Os02g04000 | Os02g0130800 | - | Detail |
| CX2g021970 | 2:1,609,681-1,611,866 | - | C1H2g29927 | C2H2g06861 | LOC_Os02g03990 | - | - | Detail |
| CX2g024453 | 2:1,613,557-1,614,724 | + | C1H2g22701 | C2H2g24840 | LOC_Os02g04000 | Os02g0130800 | - | Detail |