| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10836 | 1:28,198,216-28,199,650 | - | C2H1g29811 | CX1g002430 | LOC_Os01g54960 | Os01g0753200 | - | Detail |
| C1H1g16292 | 1:28,200,764-28,202,409 | + | C2H1g20006 | CX1g006340 | LOC_Os01g54969 | Os01g0753300 | OsASMT1 | Detail |
| C1H1g07442 | 1:28,202,676-28,208,745 | - | C2H1g09497 | CX1g002732 | LOC_Os01g54990 | Os01g0753500 | OsARF3lb | Detail |
| C1H1g02806 | 1:28,221,205-28,222,136 | + | C2H1g17359 | CX1g006658 | LOC_Os01g55020 | Os01g0754000 | - | Detail |
| C1H1g16947 | 1:28,224,309-28,226,105 | - | C2H1g07609 | CX1g002933 | LOC_Os01g55030 | Os01g0754100 | - | Detail |
| C1H1g05578 | 1:28,227,601-28,236,955 | - | C2H1g07292 | CX1g005591 | LOC_Os01g55040 | Os01g0754200 | - | Detail |
| C1H1g11544 | 1:28,237,266-28,242,179 | - | C2H1g26542 | CX1g006946 | LOC_Os01g55050 | Os01g0754500 | - | Detail |
| C1H1g27304 | 1:28,273,856-28,282,338 | - | C2H1g25651 | CX1g006404 | LOC_Os01g55094 | Os01g0755100 | - | Detail |
| C1H1g29987 | 1:28,291,077-28,292,504 | + | C2H1g07282 | CX1g000336 | LOC_Os01g55100 | Os01g0755500 | OsPCF7, PCF7 | Detail |
| C1H1g10544 | 1:28,333,028-28,335,537 | - | C2H1g26286 | CX1g005575 | LOC_Os01g55120 | Os01g0756000 | - | Detail |
| C1H1g11346 | 1:28,340,031-28,341,059 | - | C2H1g10412 | - | LOC_Os01g55140 | Os01g0756101 | - | Detail |
| C1H1g21888 | 1:28,343,215-28,343,646 | + | C2H1g27103 | CX1g006243 | LOC_Os01g55150 | Os01g0756200 | - | Detail |
| C1H1g31515 | 1:28,344,380-28,345,306 | + | C2H1g14895 | CX1g006243 | LOC_Os01g55150 | Os01g0756200 | - | Detail |
| C1H1g02918 | 1:28,352,747-28,363,013 | - | C2H1g30168 | CX1g003911 | LOC_Os01g55170 | Os01g0756400 | - | Detail |
| C1H1g08295 | 1:28,368,293-28,372,229 | + | C2H1g05126 | CX1g003221 | LOC_Os01g55190 | Os01g0531400 | - | Detail |
| C1H1g21813 | 1:28,381,812-28,384,050 | + | C2H1g22597 | CX1g002081 | LOC_Os01g55200 | Os01g0756700 | KAT1, OsKAT1 | Detail |
| C1H1g15032 | 1:28,402,160-28,404,225 | + | C2H1g23299 | CX1g004140 | LOC_Os01g55240 | Os01g0757200 | GA2OX3, OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3 | Detail |
| C1H1g13228 | 1:28,418,667-28,422,542 | + | C2H1g18562 | CX1g001542 | LOC_Os01g55260 | Os01g0757400 | - | Detail |
| C1H1g20677 | 1:28,423,057-28,425,847 | - | C2H1g15915 | CX1g000631 | LOC_Os01g55270 | Os01g0757500 | - | Detail |
| C1H1g01435 | 1:28,432,212-28,434,104 | - | C2H1g24400 | CX1g004257 | LOC_Os01g55280 | Os01g0757600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023117 | 2:1,480,131-1,480,547 | - | C1H2g09748 | - | LOC_Os02g03830 | Os02g0131000 | - | Detail |
| CX2g020728 | 2:1,484,821-1,485,102 | - | - | - | - | Os02g0131050 | - | Detail |
| CX2g021664 | 2:1,488,026-1,499,033 | + | C1H2g22468 | C2H2g19848 | LOC_Os02g03840 | Os02g0131100 | - | Detail |
| CX2g022294 | 2:1,501,947-1,506,559 | - | C1H2g15765 | C2H2g29791 | LOC_Os02g03850 | Os02g0131200 | - | Detail |
| CX2g022118 | 2:1,507,158-1,510,295 | + | C1H2g24459 | C2H2g01875 | LOC_Os02g03860 | Os02g0131300 | - | Detail |
| CX2g019313 | 2:1,513,426-1,520,121 | - | C1H2g13894 | C2H2g19732 | LOC_Os02g03870 | Os02g0131400 | - | Detail |
| CX2g023899 | 2:1,525,743-1,526,135 | - | C1H2g25126 | - | - | - | - | Detail |
| CX2g022522 | 2:1,530,354-1,530,611 | + | C1H2g29540 | - | LOC_Os02g03880 | Os02g0131600 | - | Detail |
| CX2g020563 | 2:1,531,903-1,534,646 | - | C1H2g05041 | C2H2g21277 | LOC_Os02g03890 | Os02g0131700 | - | Detail |
| CX2g019095 | 2:1,536,717-1,540,530 | - | C1H2g18848 | C2H2g13835 | LOC_Os02g03900 | Os02g0131800 | NRAMP4, OsNRAMP4, Nrat1, Nramp6, OsNRAT1 | Detail |
| CX2g023698 | 2:1,542,827-1,543,948 | + | C1H2g22701 | C2H2g24840 | LOC_Os02g03910 | Os02g0130800 | - | Detail |
| CX2g019802 | 2:1,546,630-1,549,501 | - | C1H2g00924 | C2H2g22540 | LOC_Os02g03930 | Os02g0132100 | - | Detail |
| CX2g018957 | 2:1,550,189-1,553,330 | - | C1H2g01456 | C2H2g12575 | LOC_Os02g03940 | Os02g0132200 | - | Detail |
| CX2g021626 | 2:1,558,001-1,560,862 | + | C1H2g17223 | C2H2g02428 | LOC_Os02g03950 | Os02g0132300 | - | Detail |
| CX2g021994 | 2:1,572,166-1,572,660 | - | C1H2g04467 | C2H2g10653 | LOC_Os02g03960 | Os02g0132500 | OsbZIP14 | Detail |
| CX2g022870 | 2:1,580,727-1,580,921 | + | - | - | - | - | - | Detail |
| CX2g024093 | 2:1,585,140-1,593,334 | - | C1H2g04799 | C2H2g24972 | LOC_Os02g03970 | Os02g0132600 | - | Detail |
| CX2g022495 | 2:1,599,484-1,600,638 | - | C1H2g22701 | C2H2g24840 | LOC_Os02g04000 | Os02g0130800 | - | Detail |
| CX2g021970 | 2:1,609,681-1,611,866 | - | C1H2g29927 | C2H2g06861 | LOC_Os02g03990 | - | - | Detail |
| CX2g024453 | 2:1,613,557-1,614,724 | + | C1H2g22701 | C2H2g24840 | LOC_Os02g04000 | Os02g0130800 | - | Detail |