| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g01750 | 6:23,162,463-23,162,801 | + | C2H6g18614 | CX6g041717 | LOC_Os06g44220 | Os06g0651900 | - | Detail |
| C1H6g04121 | 6:23,166,020-23,175,478 | + | C2H6g04414 | CX6g043732 | LOC_Os06g44230 | Os06g0652000 | OsRpoTp | Detail |
| C1H6g15180 | 6:23,175,958-23,177,889 | + | - | CX6g041247 | LOC_Os06g44240 | Os06g0652100 | - | Detail |
| C1H6g01218 | 6:23,179,016-23,181,683 | - | C2H6g21516 | CX6g041449 | LOC_Os06g44250 | Os06g0652200 | - | Detail |
| C1H6g03050 | 6:23,184,191-23,185,231 | - | C2H6g22019 | CX6g042490 | LOC_Os06g44260 | Os06g0652300 | - | Detail |
| C1H6g02219 | 6:23,193,970-23,195,424 | + | C2H6g18433 | CX6g045070 | LOC_Os06g44270 | Os06g0652400 | - | Detail |
| C1H6g20298 | 6:23,198,091-23,200,919 | + | C2H6g12238 | CX6g042783 | LOC_Os06g44275 | Os06g0652550 | - | Detail |
| C1H6g00728 | 6:23,208,005-23,210,064 | + | - | CX6g041891 | LOC_Os06g44280 | Os06g0652600 | - | Detail |
| C1H6g05074 | 6:23,223,940-23,234,293 | + | C2H6g20360 | CX6g042188 | LOC_Os06g44300 | Os06g0653000 | OsGL1-3 | Detail |
| C1H6g11941 | 6:23,242,761-23,245,384 | + | C2H6g25445 | CX6g042676 | LOC_Os06g44310 | Os06g0653100 | OsTET10 | Detail |
| C1H6g01389 | 6:23,246,764-23,247,904 | - | C2H6g08996 | CX6g045977 | LOC_Os06g44320 | Os06g0653200 | OsbHLH158 | Detail |
| C1H6g00860 | 6:23,258,359-23,259,339 | - | C2H6g05890 | CX6g043383 | LOC_Os06g44370 | Os06g0653800 | - | Detail |
| C1H6g22819 | 6:23,262,471-23,264,165 | - | C2H6g16162 | CX6g042770 | LOC_Os06g44374 | Os06g0653900 | - | Detail |
| C1H6g15277 | 6:23,266,851-23,271,228 | - | C2H6g27303 | CX6g042598 | LOC_Os06g44380 | Os06g0654000 | - | Detail |
| C1H6g18955 | 6:23,286,700-23,292,306 | + | C2H6g25215 | CX6g044147 | LOC_Os06g44410 | Os06g0654300 | MHZ1, OsHK1, MHZ1/OsHK1 | Detail |
| C1H6g06234 | 6:23,308,617-23,309,177 | + | - | CX6g043555 | LOC_Os06g44420 | Os06g0654400 | - | Detail |
| C1H6g09733 | 6:23,312,939-23,314,218 | + | C2H6g29745 | CX6g043668 | LOC_Os06g44430 | Os06g0654600 | - | Detail |
| C1H6g03834 | 6:23,314,635-23,315,198 | + | C2H6g29745 | CX6g043668 | LOC_Os06g44430 | Os06g0660800 | - | Detail |
| C1H6g07146 | 6:23,317,980-23,319,476 | - | C2H6g19072 | CX6g042351 | LOC_Os06g44450 | Os06g0654900 | - | Detail |
| C1H6g07554 | 6:23,329,209-23,334,112 | - | C2H6g00193 | CX6g042826 | LOC_Os06g44460 | Os06g0655100 | OsPGDH3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023117 | 2:1,480,131-1,480,547 | - | C1H2g09748 | - | LOC_Os02g03830 | Os02g0131000 | - | Detail |
| CX2g020728 | 2:1,484,821-1,485,102 | - | - | - | - | Os02g0131050 | - | Detail |
| CX2g021664 | 2:1,488,026-1,499,033 | + | C1H2g22468 | C2H2g19848 | LOC_Os02g03840 | Os02g0131100 | - | Detail |
| CX2g022294 | 2:1,501,947-1,506,559 | - | C1H2g15765 | C2H2g29791 | LOC_Os02g03850 | Os02g0131200 | - | Detail |
| CX2g022118 | 2:1,507,158-1,510,295 | + | C1H2g24459 | C2H2g01875 | LOC_Os02g03860 | Os02g0131300 | - | Detail |
| CX2g019313 | 2:1,513,426-1,520,121 | - | C1H2g13894 | C2H2g19732 | LOC_Os02g03870 | Os02g0131400 | - | Detail |
| CX2g023899 | 2:1,525,743-1,526,135 | - | C1H2g25126 | - | - | - | - | Detail |
| CX2g022522 | 2:1,530,354-1,530,611 | + | C1H2g29540 | - | LOC_Os02g03880 | Os02g0131600 | - | Detail |
| CX2g020563 | 2:1,531,903-1,534,646 | - | C1H2g05041 | C2H2g21277 | LOC_Os02g03890 | Os02g0131700 | - | Detail |
| CX2g019095 | 2:1,536,717-1,540,530 | - | C1H2g18848 | C2H2g13835 | LOC_Os02g03900 | Os02g0131800 | NRAMP4, OsNRAMP4, Nrat1, Nramp6, OsNRAT1 | Detail |
| CX2g023698 | 2:1,542,827-1,543,948 | + | C1H2g22701 | C2H2g24840 | LOC_Os02g03910 | Os02g0130800 | - | Detail |
| CX2g019802 | 2:1,546,630-1,549,501 | - | C1H2g00924 | C2H2g22540 | LOC_Os02g03930 | Os02g0132100 | - | Detail |
| CX2g018957 | 2:1,550,189-1,553,330 | - | C1H2g01456 | C2H2g12575 | LOC_Os02g03940 | Os02g0132200 | - | Detail |
| CX2g021626 | 2:1,558,001-1,560,862 | + | C1H2g17223 | C2H2g02428 | LOC_Os02g03950 | Os02g0132300 | - | Detail |
| CX2g021994 | 2:1,572,166-1,572,660 | - | C1H2g04467 | C2H2g10653 | LOC_Os02g03960 | Os02g0132500 | OsbZIP14 | Detail |
| CX2g022870 | 2:1,580,727-1,580,921 | + | - | - | - | - | - | Detail |
| CX2g024093 | 2:1,585,140-1,593,334 | - | C1H2g04799 | C2H2g24972 | LOC_Os02g03970 | Os02g0132600 | - | Detail |
| CX2g022495 | 2:1,599,484-1,600,638 | - | C1H2g22701 | C2H2g24840 | LOC_Os02g04000 | Os02g0130800 | - | Detail |
| CX2g021970 | 2:1,609,681-1,611,866 | - | C1H2g29927 | C2H2g06861 | LOC_Os02g03990 | - | - | Detail |
| CX2g024453 | 2:1,613,557-1,614,724 | + | C1H2g22701 | C2H2g24840 | LOC_Os02g04000 | Os02g0130800 | - | Detail |