| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21921 | 3:11,220,180-11,220,545 | - | C1H3g02489 | CX3g028477 | - | - | - | Detail |
| C2H3g27756 | 3:11,220,386-11,226,741 | + | C1H3g18174 | CX3g024945 | LOC_Os03g21990 | Os03g0339100 | - | Detail |
| C2H3g08189 | 3:11,228,016-11,229,869 | + | C1H3g23493 | CX3g029752 | LOC_Os03g22010 | Os03g0339300 | - | Detail |
| C2H3g17635 | 3:11,230,821-11,232,950 | + | C1H3g01797 | CX3g029752 | LOC_Os03g22020 | Os03g0434800 | - | Detail |
| C2H3g03307 | 3:11,234,346-11,235,564 | - | C1H3g30937 | CX3g026989 | LOC_Os03g22020 | Os03g0434800 | - | Detail |
| C2H3g17458 | 3:11,242,758-11,245,895 | + | C1H3g22536 | CX3g028644 | LOC_Os03g22040 | Os03g0339700 | - | Detail |
| C2H3g13815 | 3:11,248,081-11,250,782 | - | C1H3g12381 | CX3g029505 | LOC_Os03g22050 | Os03g0339900 | - | Detail |
| C2H3g21418 | 3:11,256,075-11,258,086 | - | C1H3g28303 | CX3g031266 | LOC_Os03g21900 | Os03g0337600 | - | Detail |
| C2H3g25583 | 3:11,259,712-11,261,137 | - | C1H3g04870 | CX3g031266 | LOC_Os03g22060 | Os03g0340001 | - | Detail |
| C2H3g07473 | 3:11,266,164-11,266,637 | + | C1H3g07849 | CX3g031157 | LOC_Os03g22080 | Os03g0340100 | - | Detail |
| C2H3g21937 | 3:11,284,459-11,290,258 | - | C1H3g19641 | CX3g027881 | LOC_Os03g22120 | Os03g0340500 | - | Detail |
| C2H3g11733 | 3:11,294,651-11,296,579 | + | C1H3g22688 | CX3g028679 | LOC_Os03g22140 | Os03g0340700 | - | Detail |
| C2H3g03250 | 3:11,300,480-11,311,386 | + | C1H3g27719 | CX3g031206 | LOC_Os03g22160 | Os03g0340900 | ARE2 | Detail |
| C2H3g25873 | 3:11,320,223-11,321,048 | + | C1H3g08303 | CX3g029548 | LOC_Os03g22170 | Os03g0341000 | ERF66, OsERF66 | Detail |
| C2H3g03921 | 3:11,324,406-11,326,606 | - | C1H3g00753 | CX3g028062 | LOC_Os03g22180 | Os03g0341100 | - | Detail |
| C2H3g07860 | 3:11,327,474-11,332,982 | - | C1H3g18892 | CX3g030546 | LOC_Os03g22190 | Os03g0341200 | - | Detail |
| C2H3g11247 | 3:11,335,967-11,338,118 | + | C1H3g26990 | CX3g027655 | LOC_Os03g22200 | Os03g0341300 | - | Detail |
| C2H3g16648 | 3:11,346,504-11,347,184 | - | C1H3g04911 | - | LOC_Os03g22210 | Os03g0341600 | - | Detail |
| C2H3g10184 | 3:11,355,961-11,356,580 | - | C1H3g20603 | - | LOC_Os03g22230 | Os03g0342100 | - | Detail |
| C2H3g15206 | 3:11,359,421-11,359,970 | - | C1H3g13653 | - | LOC_Os03g22210 | Os03g0341600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022993 | 2:995,408-995,926 | + | C1H2g17128 | - | LOC_Os02g02890 | Os02g0121300 | LRT2, CYC2, cyc2*, cyc2, OsCYP2, Cyp2, OsCYP19-2, CYP19-2, OsCYP-2, OsCyp2-P, OsCyp2, OsCYP19-1, LRT2/OsCYP2, lrt2*, lrt2 | Detail |
| CX2g022157 | 2:1,000,084-1,000,257 | - | - | - | - | Os02g0188201 | - | Detail |
| CX2g021732 | 2:1,002,578-1,003,994 | - | C1H2g10216 | C2H2g00692 | LOC_Os02g02900 | Os02g0121400 | - | Detail |
| CX2g020770 | 2:1,004,929-1,010,128 | - | C1H2g15498 | C2H2g20864 | LOC_Os02g02910 | Os02g0121500 | - | Detail |
| CX2g020376 | 2:1,014,718-1,017,747 | + | C1H2g05573 | C2H2g07493 | LOC_Os02g02920 | - | - | Detail |
| CX2g021960 | 2:1,035,911-1,040,551 | + | C1H2g17010 | C2H2g11739 | LOC_Os02g02930 | Os02g0121700 | - | Detail |
| CX2g019921 | 2:1,042,762-1,043,809 | + | C1H2g06823 | C2H2g29898 | LOC_Os02g02940 | Os02g0121800 | - | Detail |
| CX2g021477 | 2:1,044,410-1,046,284 | + | C1H2g06285 | C2H2g01592 | LOC_Os02g02950 | Os02g0121900 | - | Detail |
| CX2g019537 | 2:1,047,636-1,049,487 | - | C1H2g00797 | C2H2g29743 | LOC_Os02g02960 | Os02g0122000 | - | Detail |
| CX2g023478 | 2:1,050,148-1,054,066 | + | C1H2g22434 | C2H2g00858 | LOC_Os02g02970 | Os02g0122100 | - | Detail |
| CX2g020160 | 2:1,055,992-1,062,950 | - | C1H2g11681 | C2H2g12345 | LOC_Os02g02980 | Os02g0122200 | - | Detail |
| CX2g019187 | 2:1,063,725-1,065,321 | - | C1H2g13050 | C2H2g06396 | LOC_Os02g02990 | Os02g0122300 | - | Detail |
| CX2g023862 | 2:1,067,355-1,070,927 | - | C1H2g20249 | C2H2g30050 | LOC_Os02g03000 | Os02g0122400 | - | Detail |
| CX2g021302 | 2:1,073,208-1,074,169 | - | C1H2g29748 | C2H2g00030 | LOC_Os02g03010 | Os02g0122500 | - | Detail |
| CX2g019827 | 2:1,076,352-1,076,789 | - | C1H2g19474 | - | LOC_Os02g03020 | Os02g0122600 | - | Detail |
| CX2g023212 | 2:1,080,155-1,081,745 | + | C1H2g08277 | C2H2g06370 | LOC_Os02g03030 | Os02g0122700 | - | Detail |
| CX2g022379 | 2:1,082,909-1,091,951 | - | C1H2g31820 | C2H2g25159 | LOC_Os02g03040 | Os02g0122800 | RS33 | Detail |
| CX2g019892 | 2:1,092,360-1,098,296 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX2g024568 | 2:1,100,957-1,104,236 | + | C1H2g03945 | C2H2g22931 | LOC_Os02g03060 | Os02g0123100 | - | Detail |
| CX2g020485 | 2:1,110,525-1,113,933 | + | C1H2g02277 | C2H2g13660 | LOC_Os02g03070 | Os02g0123200 | - | Detail |