| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g18266 | 2:11,458,446-11,462,916 | - | C1H2g09388 | CX2g022792 | LOC_Os02g21260 | Os02g0317500 | - | Detail |
| C2H2g12128 | 2:11,466,512-11,468,422 | - | C1H2g16859 | CX2g023978 | LOC_Os02g21280 | Os02g0317800 | - | Detail |
| C2H2g09930 | 2:11,469,311-11,470,539 | - | C1H2g12336 | CX2g023978 | LOC_Os02g21280 | Os02g0317800 | - | Detail |
| C2H2g22334 | 2:11,482,185-11,484,421 | + | C1H2g08550 | CX2g024666 | LOC_Os02g21300 | Os02g0318100 | - | Detail |
| C2H2g05102 | 2:11,490,347-11,492,041 | + | C1H2g10217 | CX2g021942 | - | - | - | Detail |
| C2H2g03069 | 2:11,499,446-11,505,342 | - | C1H2g08002 | CX2g024606 | LOC_Os02g21340 | Os02g0318500 | - | Detail |
| C2H2g15361 | 2:11,510,899-11,511,758 | - | C1H2g21777 | - | - | - | - | Detail |
| C2H2g09618 | 2:11,515,565-11,516,011 | - | C1H2g31164 | CX2g021771 | LOC_Os02g21350 | Os02g0318600 | - | Detail |
| C2H2g16488 | 2:11,522,294-11,522,665 | - | - | - | - | - | - | Detail |
| C2H2g05008 | 2:11,542,189-11,550,249 | + | C1H2g09114 | CX2g024414 | LOC_Os02g21430 | Os02g0319100 | - | Detail |
| C2H2g29606 | 2:11,557,433-11,561,065 | - | C1H2g02929 | CX2g022680 | LOC_Os02g21460 | Os02g0319300 | - | Detail |
| C2H2g16870 | 2:11,564,546-11,569,183 | - | C1H2g00217 | CX2g023656 | LOC_Os02g21490 | Os02g0319800 | - | Detail |
| C2H2g18461 | 2:11,570,416-11,573,623 | - | - | - | - | - | - | Detail |
| C2H2g08745 | 2:11,584,593-11,586,805 | + | C1H2g09105 | - | - | Os02g0320000 | - | Detail |
| C2H2g14591 | 2:11,588,614-11,592,754 | - | C1H2g00279 | CX2g020525 | LOC_Os02g21510 | Os02g0320100 | ROX2 | Detail |
| C2H2g01664 | 2:11,610,646-11,615,200 | + | C1H2g25889 | CX2g023631 | LOC_Os02g21520 | Os02g0320300 | - | Detail |
| C2H2g24833 | 2:11,616,038-11,618,267 | + | C1H2g25889 | CX2g023631 | LOC_Os02g21520 | Os02g0320300 | - | Detail |
| C2H2g25887 | 2:11,624,738-11,625,720 | + | C1H2g30985 | CX2g020030 | LOC_Os02g21530 | Os02g0320600 | - | Detail |
| C2H2g17365 | 2:11,626,984-11,630,212 | + | C1H1g26333 | CX2g019183 | - | - | - | Detail |
| C2H2g27274 | 2:11,653,293-11,654,189 | + | C1H2g12133 | CX2g019143 | LOC_Os02g17940 | Os02g0280700 | HIS1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022993 | 2:995,408-995,926 | + | C1H2g17128 | - | LOC_Os02g02890 | Os02g0121300 | LRT2, CYC2, cyc2*, cyc2, OsCYP2, Cyp2, OsCYP19-2, CYP19-2, OsCYP-2, OsCyp2-P, OsCyp2, OsCYP19-1, LRT2/OsCYP2, lrt2*, lrt2 | Detail |
| CX2g022157 | 2:1,000,084-1,000,257 | - | - | - | - | Os02g0188201 | - | Detail |
| CX2g021732 | 2:1,002,578-1,003,994 | - | C1H2g10216 | C2H2g00692 | LOC_Os02g02900 | Os02g0121400 | - | Detail |
| CX2g020770 | 2:1,004,929-1,010,128 | - | C1H2g15498 | C2H2g20864 | LOC_Os02g02910 | Os02g0121500 | - | Detail |
| CX2g020376 | 2:1,014,718-1,017,747 | + | C1H2g05573 | C2H2g07493 | LOC_Os02g02920 | - | - | Detail |
| CX2g021960 | 2:1,035,911-1,040,551 | + | C1H2g17010 | C2H2g11739 | LOC_Os02g02930 | Os02g0121700 | - | Detail |
| CX2g019921 | 2:1,042,762-1,043,809 | + | C1H2g06823 | C2H2g29898 | LOC_Os02g02940 | Os02g0121800 | - | Detail |
| CX2g021477 | 2:1,044,410-1,046,284 | + | C1H2g06285 | C2H2g01592 | LOC_Os02g02950 | Os02g0121900 | - | Detail |
| CX2g019537 | 2:1,047,636-1,049,487 | - | C1H2g00797 | C2H2g29743 | LOC_Os02g02960 | Os02g0122000 | - | Detail |
| CX2g023478 | 2:1,050,148-1,054,066 | + | C1H2g22434 | C2H2g00858 | LOC_Os02g02970 | Os02g0122100 | - | Detail |
| CX2g020160 | 2:1,055,992-1,062,950 | - | C1H2g11681 | C2H2g12345 | LOC_Os02g02980 | Os02g0122200 | - | Detail |
| CX2g019187 | 2:1,063,725-1,065,321 | - | C1H2g13050 | C2H2g06396 | LOC_Os02g02990 | Os02g0122300 | - | Detail |
| CX2g023862 | 2:1,067,355-1,070,927 | - | C1H2g20249 | C2H2g30050 | LOC_Os02g03000 | Os02g0122400 | - | Detail |
| CX2g021302 | 2:1,073,208-1,074,169 | - | C1H2g29748 | C2H2g00030 | LOC_Os02g03010 | Os02g0122500 | - | Detail |
| CX2g019827 | 2:1,076,352-1,076,789 | - | C1H2g19474 | - | LOC_Os02g03020 | Os02g0122600 | - | Detail |
| CX2g023212 | 2:1,080,155-1,081,745 | + | C1H2g08277 | C2H2g06370 | LOC_Os02g03030 | Os02g0122700 | - | Detail |
| CX2g022379 | 2:1,082,909-1,091,951 | - | C1H2g31820 | C2H2g25159 | LOC_Os02g03040 | Os02g0122800 | RS33 | Detail |
| CX2g019892 | 2:1,092,360-1,098,296 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX2g024568 | 2:1,100,957-1,104,236 | + | C1H2g03945 | C2H2g22931 | LOC_Os02g03060 | Os02g0123100 | - | Detail |
| CX2g020485 | 2:1,110,525-1,113,933 | + | C1H2g02277 | C2H2g13660 | LOC_Os02g03070 | Os02g0123200 | - | Detail |