| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g09260 | 1:37,476,513-37,483,123 | + | C1H1g06601 | CX1g003931 | LOC_Os01g72834 | Os01g0958500 | - | Detail |
| C2H1g11916 | 1:37,483,510-37,484,012 | - | C1H1g17341 | CX1g002191 | LOC_Os01g72850 | Os01g0748500 | - | Detail |
| C2H1g16622 | 1:37,488,596-37,493,131 | + | C1H1g20872 | CX1g001374 | LOC_Os01g72860 | Os01g0958700 | - | Detail |
| C2H1g17179 | 1:37,493,301-37,496,821 | - | C1H1g13353 | CX1g003826 | LOC_Os01g72870 | Os01g0958800 | - | Detail |
| C2H1g23082 | 1:37,497,328-37,508,922 | + | C1H1g19836 | CX1g002997 | LOC_Os01g72880 | Os01g0958900 | - | Detail |
| C2H1g16082 | 1:37,501,887-37,503,917 | - | - | - | - | Os01g0958950 | - | Detail |
| C2H1g03600 | 1:37,509,800-37,510,221 | - | C1H1g01576 | CX1g005210 | LOC_Os01g72900 | Os01g0959100 | - | Detail |
| C2H1g25163 | 1:37,511,210-37,511,668 | + | C1H1g25395 | CX1g001673 | LOC_Os01g72910 | Os01g0959200 | OsASR1 | Detail |
| C2H1g09318 | 1:37,518,139-37,521,190 | + | C1H1g17990 | CX1g000366 | LOC_Os01g72930 | Os01g0959600 | - | Detail |
| C2H1g08421 | 1:37,529,103-37,537,329 | - | C1H1g16021 | CX1g006226 | LOC_Os01g72940 | Os01g0959800 | - | Detail |
| C2H1g02502 | 1:37,538,311-37,539,349 | + | C1H1g05317 | CX1g001487 | LOC_Os01g72950 | Os01g0959900 | - | Detail |
| C2H1g23027 | 1:37,541,143-37,543,242 | + | C1H1g25593 | CX1g004319 | LOC_Os01g72960 | Os01g0960000 | - | Detail |
| C2H1g16511 | 1:37,551,365-37,554,190 | + | C1H1g17830 | CX1g002518 | LOC_Os01g72970 | Os01g0960200 | - | Detail |
| C2H1g22651 | 1:37,554,975-37,561,293 | - | C1H1g23836 | CX1g007108 | LOC_Os01g72980 | Os01g0960300 | - | Detail |
| C2H1g16152 | 1:37,561,840-37,574,219 | - | C1H1g14029 | CX1g006984 | LOC_Os01g72990 | Os01g0960400 | - | Detail |
| C2H1g18993 | 1:37,576,346-37,580,641 | - | C1H1g17225 | CX1g006298 | LOC_Os01g73000 | Os01g0960500 | - | Detail |
| C2H1g16817 | 1:37,583,957-37,586,241 | - | C1H1g29525 | CX1g002410 | LOC_Os01g73005 | Os01g0960600 | - | Detail |
| C2H1g12796 | 1:37,587,041-37,588,611 | - | C1H1g11960 | CX1g003397 | LOC_Os10g33910 | Os01g0960800 | - | Detail |
| C2H1g21477 | 1:37,593,749-37,596,675 | - | C1H1g30659 | CX1g004417 | LOC_Os01g68510 | Os01g0960900 | - | Detail |
| C2H1g15167 | 1:37,605,300-37,609,726 | + | C1H1g25253 | CX1g004462 | LOC_Os01g73040 | Os01g0961200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022993 | 2:995,408-995,926 | + | C1H2g17128 | - | LOC_Os02g02890 | Os02g0121300 | LRT2, CYC2, cyc2*, cyc2, OsCYP2, Cyp2, OsCYP19-2, CYP19-2, OsCYP-2, OsCyp2-P, OsCyp2, OsCYP19-1, LRT2/OsCYP2, lrt2*, lrt2 | Detail |
| CX2g022157 | 2:1,000,084-1,000,257 | - | - | - | - | Os02g0188201 | - | Detail |
| CX2g021732 | 2:1,002,578-1,003,994 | - | C1H2g10216 | C2H2g00692 | LOC_Os02g02900 | Os02g0121400 | - | Detail |
| CX2g020770 | 2:1,004,929-1,010,128 | - | C1H2g15498 | C2H2g20864 | LOC_Os02g02910 | Os02g0121500 | - | Detail |
| CX2g020376 | 2:1,014,718-1,017,747 | + | C1H2g05573 | C2H2g07493 | LOC_Os02g02920 | - | - | Detail |
| CX2g021960 | 2:1,035,911-1,040,551 | + | C1H2g17010 | C2H2g11739 | LOC_Os02g02930 | Os02g0121700 | - | Detail |
| CX2g019921 | 2:1,042,762-1,043,809 | + | C1H2g06823 | C2H2g29898 | LOC_Os02g02940 | Os02g0121800 | - | Detail |
| CX2g021477 | 2:1,044,410-1,046,284 | + | C1H2g06285 | C2H2g01592 | LOC_Os02g02950 | Os02g0121900 | - | Detail |
| CX2g019537 | 2:1,047,636-1,049,487 | - | C1H2g00797 | C2H2g29743 | LOC_Os02g02960 | Os02g0122000 | - | Detail |
| CX2g023478 | 2:1,050,148-1,054,066 | + | C1H2g22434 | C2H2g00858 | LOC_Os02g02970 | Os02g0122100 | - | Detail |
| CX2g020160 | 2:1,055,992-1,062,950 | - | C1H2g11681 | C2H2g12345 | LOC_Os02g02980 | Os02g0122200 | - | Detail |
| CX2g019187 | 2:1,063,725-1,065,321 | - | C1H2g13050 | C2H2g06396 | LOC_Os02g02990 | Os02g0122300 | - | Detail |
| CX2g023862 | 2:1,067,355-1,070,927 | - | C1H2g20249 | C2H2g30050 | LOC_Os02g03000 | Os02g0122400 | - | Detail |
| CX2g021302 | 2:1,073,208-1,074,169 | - | C1H2g29748 | C2H2g00030 | LOC_Os02g03010 | Os02g0122500 | - | Detail |
| CX2g019827 | 2:1,076,352-1,076,789 | - | C1H2g19474 | - | LOC_Os02g03020 | Os02g0122600 | - | Detail |
| CX2g023212 | 2:1,080,155-1,081,745 | + | C1H2g08277 | C2H2g06370 | LOC_Os02g03030 | Os02g0122700 | - | Detail |
| CX2g022379 | 2:1,082,909-1,091,951 | - | C1H2g31820 | C2H2g25159 | LOC_Os02g03040 | Os02g0122800 | RS33 | Detail |
| CX2g019892 | 2:1,092,360-1,098,296 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX2g024568 | 2:1,100,957-1,104,236 | + | C1H2g03945 | C2H2g22931 | LOC_Os02g03060 | Os02g0123100 | - | Detail |
| CX2g020485 | 2:1,110,525-1,113,933 | + | C1H2g02277 | C2H2g13660 | LOC_Os02g03070 | Os02g0123200 | - | Detail |