| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13789 | 3:22,016,452-22,018,966 | - | C2H3g05535 | CX3g030510 | LOC_Os03g41460 | Os03g0610900 | SAPK10, OsSAPK10 | Detail |
| C1H3g22269 | 3:22,029,244-22,033,852 | + | C2H3g15741 | CX3g026107 | LOC_Os03g41510 | Os03g0611200 | - | Detail |
| C1H3g17986 | 3:22,035,539-22,038,425 | - | C2H3g25650 | CX3g025338 | LOC_Os03g41530 | Os03g0611700 | - | Detail |
| C1H3g17011 | 3:22,070,131-22,071,051 | + | C2H3g04855 | CX3g025821 | LOC_Os03g41600 | Os03g0612400 | - | Detail |
| C1H3g12958 | 3:22,078,042-22,082,492 | - | C2H3g09198 | CX3g031277 | LOC_Os03g41612 | Os03g0612600 | - | Detail |
| C1H3g29822 | 3:22,105,761-22,111,850 | + | C2H3g10005 | CX3g030220 | LOC_Os03g42010 | Os03g0616300 | - | Detail |
| C1H3g02131 | 3:22,112,841-22,118,431 | + | C2H3g25190 | CX3g027194 | LOC_Os03g42020 | Os03g0616400 | - | Detail |
| C1H3g04775 | 3:22,122,945-22,128,579 | - | C2H3g04640 | CX3g028407 | LOC_Os03g42040 | Os03g0616500 | - | Detail |
| C1H3g10684 | 3:22,134,390-22,149,984 | - | C2H3g04177 | CX3g025679 | LOC_Os03g42050 | Os03g0616700 | - | Detail |
| C1H3g02090 | 3:22,185,359-22,186,825 | - | C2H3g24758 | CX3g029365 | LOC_Os03g42070 | Os03g0617500 | - | Detail |
| C1H3g25739 | 3:22,218,359-22,222,460 | - | C2H3g20240 | CX3g028127 | LOC_Os03g42110 | Os03g0617900 | - | Detail |
| C1H3g17864 | 3:22,244,975-22,246,986 | - | C2H3g19029 | CX3g025773 | LOC_Os03g42130 | Os03g0618300 | - | Detail |
| C1H3g22177 | 3:22,250,794-22,254,930 | + | - | - | - | - | - | Detail |
| C1H3g03687 | 3:22,273,330-22,278,555 | + | C2H3g03302 | CX3g029634 | LOC_Os03g42220 | Os03g0619400 | - | Detail |
| C1H3g26153 | 3:22,280,379-22,283,088 | + | C2H3g27772 | CX3g026756 | LOC_Os03g42230 | Os03g0619600 | - | Detail |
| C1H3g06725 | 3:22,285,276-22,292,010 | + | C2H3g24221 | CX3g025711 | LOC_Os03g42240 | Os03g0619800 | - | Detail |
| C1H3g18743 | 3:22,296,247-22,298,712 | + | C2H3g00057 | CX3g025711 | LOC_Os03g42230 | Os03g0619850 | - | Detail |
| C1H3g14727 | 3:22,307,196-22,309,040 | + | C2H3g18118 | CX3g026756 | LOC_Os03g42280 | Os03g0620400 | - | Detail |
| C1H3g10562 | 3:22,316,290-22,317,279 | + | C2H3g09124 | CX3g026756 | LOC_Os03g42240 | Os03g0620500 | - | Detail |
| C1H3g27023 | 3:22,318,784-22,319,764 | + | C2H3g05492 | CX3g025711 | LOC_Os03g42290 | Os03g0620400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022993 | 2:995,408-995,926 | + | C1H2g17128 | - | LOC_Os02g02890 | Os02g0121300 | LRT2, CYC2, cyc2*, cyc2, OsCYP2, Cyp2, OsCYP19-2, CYP19-2, OsCYP-2, OsCyp2-P, OsCyp2, OsCYP19-1, LRT2/OsCYP2, lrt2*, lrt2 | Detail |
| CX2g022157 | 2:1,000,084-1,000,257 | - | - | - | - | Os02g0188201 | - | Detail |
| CX2g021732 | 2:1,002,578-1,003,994 | - | C1H2g10216 | C2H2g00692 | LOC_Os02g02900 | Os02g0121400 | - | Detail |
| CX2g020770 | 2:1,004,929-1,010,128 | - | C1H2g15498 | C2H2g20864 | LOC_Os02g02910 | Os02g0121500 | - | Detail |
| CX2g020376 | 2:1,014,718-1,017,747 | + | C1H2g05573 | C2H2g07493 | LOC_Os02g02920 | - | - | Detail |
| CX2g021960 | 2:1,035,911-1,040,551 | + | C1H2g17010 | C2H2g11739 | LOC_Os02g02930 | Os02g0121700 | - | Detail |
| CX2g019921 | 2:1,042,762-1,043,809 | + | C1H2g06823 | C2H2g29898 | LOC_Os02g02940 | Os02g0121800 | - | Detail |
| CX2g021477 | 2:1,044,410-1,046,284 | + | C1H2g06285 | C2H2g01592 | LOC_Os02g02950 | Os02g0121900 | - | Detail |
| CX2g019537 | 2:1,047,636-1,049,487 | - | C1H2g00797 | C2H2g29743 | LOC_Os02g02960 | Os02g0122000 | - | Detail |
| CX2g023478 | 2:1,050,148-1,054,066 | + | C1H2g22434 | C2H2g00858 | LOC_Os02g02970 | Os02g0122100 | - | Detail |
| CX2g020160 | 2:1,055,992-1,062,950 | - | C1H2g11681 | C2H2g12345 | LOC_Os02g02980 | Os02g0122200 | - | Detail |
| CX2g019187 | 2:1,063,725-1,065,321 | - | C1H2g13050 | C2H2g06396 | LOC_Os02g02990 | Os02g0122300 | - | Detail |
| CX2g023862 | 2:1,067,355-1,070,927 | - | C1H2g20249 | C2H2g30050 | LOC_Os02g03000 | Os02g0122400 | - | Detail |
| CX2g021302 | 2:1,073,208-1,074,169 | - | C1H2g29748 | C2H2g00030 | LOC_Os02g03010 | Os02g0122500 | - | Detail |
| CX2g019827 | 2:1,076,352-1,076,789 | - | C1H2g19474 | - | LOC_Os02g03020 | Os02g0122600 | - | Detail |
| CX2g023212 | 2:1,080,155-1,081,745 | + | C1H2g08277 | C2H2g06370 | LOC_Os02g03030 | Os02g0122700 | - | Detail |
| CX2g022379 | 2:1,082,909-1,091,951 | - | C1H2g31820 | C2H2g25159 | LOC_Os02g03040 | Os02g0122800 | RS33 | Detail |
| CX2g019892 | 2:1,092,360-1,098,296 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX2g024568 | 2:1,100,957-1,104,236 | + | C1H2g03945 | C2H2g22931 | LOC_Os02g03060 | Os02g0123100 | - | Detail |
| CX2g020485 | 2:1,110,525-1,113,933 | + | C1H2g02277 | C2H2g13660 | LOC_Os02g03070 | Os02g0123200 | - | Detail |