| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g10728 | 9:16,830,371-16,832,276 | + | C2H9g26463 | CX9g055900 | LOC_Os09g34230 | Os09g0518000 | OsUGT74H4 | Detail |
| C1H9g19198 | 9:16,838,064-16,839,569 | + | C2H9g02520 | CX9g054966 | LOC_Os09g34250 | Os09g0518200 | OsSGT1 | Detail |
| C1H9g30947 | 9:16,844,284-16,845,772 | + | C2H9g22734 | CX9g055928 | LOC_Os09g34270 | Os09g0518400 | - | Detail |
| C1H9g09147 | 9:16,852,135-16,856,191 | + | C2H9g08049 | CX9g055676 | LOC_Os09g34280 | Os09g0518500 | - | Detail |
| C1H9g05389 | 9:16,857,063-16,858,689 | - | C2H9g03145 | CX9g056764 | LOC_Os09g34290 | Os09g0518600 | - | Detail |
| C1H9g00022 | 9:16,859,212-16,863,946 | - | C2H9g00047 | CX9g055254 | LOC_Os09g34300 | Os09g0518700 | - | Detail |
| C1H9g22729 | 9:16,866,758-16,867,299 | + | C2H9g05387 | CX9g057932 | LOC_Os09g34310 | - | - | Detail |
| C1H9g23239 | 9:16,872,391-16,873,428 | - | - | CX9g056160 | LOC_Os09g34320 | Os09g0518900 | - | Detail |
| C1H9g17507 | 9:16,882,934-16,883,785 | - | C2H9g03669 | CX9g055953 | LOC_Os09g34330 | Os09g0519100 | - | Detail |
| C1H9g15652 | 9:16,900,586-16,901,373 | - | C2H9g27958 | - | - | - | - | Detail |
| C1H9g11494 | 9:16,902,311-16,902,511 | - | C2H1g00715 | CX9g055320 | LOC_Os12g03160 | - | - | Detail |
| C1H9g20303 | 9:16,915,583-16,916,061 | - | C2H9g09976 | CX9g055247 | LOC_Os09g34850 | Os09g0520100 | - | Detail |
| C1H9g03744 | 9:16,920,848-16,923,558 | + | C2H9g00711 | CX9g055700 | LOC_Os09g34860 | Os09g0520200 | - | Detail |
| C1H9g28676 | 9:16,924,601-16,926,496 | + | C2H9g07064 | CX9g057087 | LOC_Os09g34870 | Os09g0520300 | - | Detail |
| C1H9g02310 | 9:16,929,155-16,932,585 | + | C2H9g21344 | CX9g057384 | LOC_Os09g34880 | Os09g0520400 | OsbZIP76 | Detail |
| C1H9g04530 | 9:16,933,479-16,934,397 | - | C2H9g01771 | CX9g055638 | LOC_Os09g34890 | Os09g0520500 | - | Detail |
| C1H9g24828 | 9:16,939,968-16,941,371 | + | C2H9g21190 | CX9g056986 | LOC_Os09g32780 | - | - | Detail |
| C1H9g25767 | 9:16,944,020-16,947,414 | - | C2H9g04653 | CX9g055686 | LOC_Os09g34900 | Os09g0520600 | - | Detail |
| C1H9g15041 | 9:16,949,494-16,953,854 | + | C2H9g24414 | CX9g058165 | LOC_Os09g34910 | Os09g0520700 | - | Detail |
| C1H9g08027 | 9:16,955,910-16,957,580 | - | C2H9g26435 | CX9g057097 | LOC_Os09g34920 | Os09g0520800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022993 | 2:995,408-995,926 | + | C1H2g17128 | - | LOC_Os02g02890 | Os02g0121300 | LRT2, CYC2, cyc2*, cyc2, OsCYP2, Cyp2, OsCYP19-2, CYP19-2, OsCYP-2, OsCyp2-P, OsCyp2, OsCYP19-1, LRT2/OsCYP2, lrt2*, lrt2 | Detail |
| CX2g022157 | 2:1,000,084-1,000,257 | - | - | - | - | Os02g0188201 | - | Detail |
| CX2g021732 | 2:1,002,578-1,003,994 | - | C1H2g10216 | C2H2g00692 | LOC_Os02g02900 | Os02g0121400 | - | Detail |
| CX2g020770 | 2:1,004,929-1,010,128 | - | C1H2g15498 | C2H2g20864 | LOC_Os02g02910 | Os02g0121500 | - | Detail |
| CX2g020376 | 2:1,014,718-1,017,747 | + | C1H2g05573 | C2H2g07493 | LOC_Os02g02920 | - | - | Detail |
| CX2g021960 | 2:1,035,911-1,040,551 | + | C1H2g17010 | C2H2g11739 | LOC_Os02g02930 | Os02g0121700 | - | Detail |
| CX2g019921 | 2:1,042,762-1,043,809 | + | C1H2g06823 | C2H2g29898 | LOC_Os02g02940 | Os02g0121800 | - | Detail |
| CX2g021477 | 2:1,044,410-1,046,284 | + | C1H2g06285 | C2H2g01592 | LOC_Os02g02950 | Os02g0121900 | - | Detail |
| CX2g019537 | 2:1,047,636-1,049,487 | - | C1H2g00797 | C2H2g29743 | LOC_Os02g02960 | Os02g0122000 | - | Detail |
| CX2g023478 | 2:1,050,148-1,054,066 | + | C1H2g22434 | C2H2g00858 | LOC_Os02g02970 | Os02g0122100 | - | Detail |
| CX2g020160 | 2:1,055,992-1,062,950 | - | C1H2g11681 | C2H2g12345 | LOC_Os02g02980 | Os02g0122200 | - | Detail |
| CX2g019187 | 2:1,063,725-1,065,321 | - | C1H2g13050 | C2H2g06396 | LOC_Os02g02990 | Os02g0122300 | - | Detail |
| CX2g023862 | 2:1,067,355-1,070,927 | - | C1H2g20249 | C2H2g30050 | LOC_Os02g03000 | Os02g0122400 | - | Detail |
| CX2g021302 | 2:1,073,208-1,074,169 | - | C1H2g29748 | C2H2g00030 | LOC_Os02g03010 | Os02g0122500 | - | Detail |
| CX2g019827 | 2:1,076,352-1,076,789 | - | C1H2g19474 | - | LOC_Os02g03020 | Os02g0122600 | - | Detail |
| CX2g023212 | 2:1,080,155-1,081,745 | + | C1H2g08277 | C2H2g06370 | LOC_Os02g03030 | Os02g0122700 | - | Detail |
| CX2g022379 | 2:1,082,909-1,091,951 | - | C1H2g31820 | C2H2g25159 | LOC_Os02g03040 | Os02g0122800 | RS33 | Detail |
| CX2g019892 | 2:1,092,360-1,098,296 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX2g024568 | 2:1,100,957-1,104,236 | + | C1H2g03945 | C2H2g22931 | LOC_Os02g03060 | Os02g0123100 | - | Detail |
| CX2g020485 | 2:1,110,525-1,113,933 | + | C1H2g02277 | C2H2g13660 | LOC_Os02g03070 | Os02g0123200 | - | Detail |