| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g24523 | 4:20,368,391-20,369,323 | - | C1H4g31685 | CX4g035066 | LOC_Os04g39570 | Os04g0471700 | - | Detail |
| C2H4g28567 | 4:20,369,334-20,371,687 | - | C1H4g31685 | CX4g035066 | LOC_Os04g39570 | Os04g0471700 | - | Detail |
| C2H4g26351 | 4:20,375,278-20,376,191 | - | - | - | - | Os04g0471700 | - | Detail |
| C2H4g00702 | 4:20,384,174-20,385,460 | - | C1H4g16030 | CX4g033693 | LOC_Os04g39590 | Os04g0472100 | - | Detail |
| C2H4g03647 | 4:20,385,815-20,386,597 | - | C1H4g16030 | CX4g032102 | LOC_Os04g39600 | Os04g0472200 | - | Detail |
| C2H4g19420 | 4:20,393,577-20,398,039 | + | C1H4g00073 | CX4g034292 | LOC_Os04g39610 | Os04g0472300 | - | Detail |
| C2H4g22876 | 4:20,403,160-20,410,476 | + | C1H4g27433 | CX4g035839 | LOC_Os04g39629 | Os04g0472400 | - | Detail |
| C2H4g21465 | 4:20,413,737-20,416,103 | + | C1H4g18621 | CX4g035839 | LOC_Os04g39650 | Os04g0472500 | - | Detail |
| C2H4g05936 | 4:20,417,104-20,417,445 | + | C1H4g18621 | CX4g035839 | LOC_Os04g39650 | Os04g0472500 | - | Detail |
| C2H4g04802 | 4:20,418,030-20,419,619 | - | C1H4g12075 | CX4g036049 | LOC_Os04g39660 | - | - | Detail |
| C2H4g02841 | 4:20,419,839-20,422,233 | + | C1H4g21886 | CX4g035542 | LOC_Os04g39670 | Os04g0472700 | - | Detail |
| C2H4g28146 | 4:20,424,851-20,427,436 | + | - | CX4g033721 | LOC_Os04g39680 | Os04g0472900 | - | Detail |
| C2H4g20727 | 4:20,427,911-20,430,021 | - | C1H4g18594 | CX4g031996 | LOC_Os04g39700 | Os04g0473400 | RPL6 | Detail |
| C2H4g02603 | 4:20,431,637-20,432,138 | - | C1H4g22390 | CX4g036319 | LOC_Os04g39770 | Os04g0473800 | FCP1, FCP1/OsCLE402, Os CLE402, OsCLE402 | Detail |
| C2H4g23069 | 4:20,438,019-20,447,937 | - | C1H4g00302 | CX4g034400 | LOC_Os04g39780 | Os04g0473900 | DWA1 | Detail |
| C2H4g27268 | 4:20,465,053-20,466,506 | - | C1H4g22436 | - | LOC_Os04g39864 | Os04g0474500 | - | Detail |
| C2H4g08296 | 4:20,468,818-20,469,627 | - | C1H4g30851 | - | LOC_Os04g39840 | Os04g0474300 | - | Detail |
| C2H4g06810 | 4:20,472,789-20,478,079 | - | C1H4g08294 | - | LOC_Os04g39840 | Os04g0474500 | - | Detail |
| C2H4g06498 | 4:20,479,799-20,485,888 | - | C1H4g25243 | - | LOC_Os04g39840 | Os04g0474500 | - | Detail |
| C2H4g26901 | 4:20,489,101-20,494,194 | - | C1H4g24332 | - | LOC_Os04g39880 | Os04g0474800 | OsTAGG2, Os4BGlu12 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003572 | 1:8,629,773-8,634,743 | - | C1H1g17187 | C2H1g21617 | LOC_Os01g16910 | Os01g0276200 | OsVDAC7 | Detail |
| CX1g005233 | 1:8,639,334-8,640,162 | + | C1H1g02811 | C2H1g10026 | LOC_Os01g16920 | Os01g0276300 | OsLEA1b | Detail |
| CX1g001016 | 1:8,642,688-8,644,124 | - | - | C2H1g04825 | LOC_Os01g16930 | Os01g0276400 | - | Detail |
| CX1g003930 | 1:8,644,902-8,648,614 | - | C1H1g24775 | C2H1g11604 | LOC_Os01g16940 | Os01g0276500 | - | Detail |
| CX1g004479 | 1:8,650,048-8,651,085 | + | C1H1g22295 | C2H1g06104 | LOC_Os01g16950 | Os01g0276600 | - | Detail |
| CX1g001281 | 1:8,653,655-8,658,869 | - | C1H1g24762 | C2H1g19690 | LOC_Os01g16960 | Os01g0276700 | - | Detail |
| CX1g002381 | 1:8,661,840-8,669,329 | - | C1H1g09923 | C2H1g18824 | LOC_Os01g16970 | Os01g0276800 | - | Detail |
| CX1g006477 | 1:8,700,110-8,703,702 | + | C1H1g21978 | C2H1g19986 | LOC_Os01g17000 | Os01g0277500 | OsDof4 | Detail |
| CX1g007267 | 1:8,704,643-8,710,744 | - | C1H1g27208 | C2H1g07072 | LOC_Os01g17010 | Os01g0277600 | - | Detail |
| CX1g002837 | 1:8,714,498-8,714,668 | - | - | - | - | - | - | Detail |
| CX1g005265 | 1:8,716,638-8,719,782 | + | C1H1g17418 | C2H1g19392 | LOC_Os01g17020 | Os01g0277700 | - | Detail |
| CX1g005153 | 1:8,723,851-8,732,251 | + | C1H1g04503 | C2H1g04598 | LOC_Os01g17040 | Os01g0277900 | - | Detail |
| CX1g006471 | 1:8,734,560-8,734,934 | + | C1H6g20429 | - | - | - | - | Detail |
| CX1g000586 | 1:8,740,974-8,741,687 | - | - | C2H1g29384 | LOC_Os01g17050 | Os01g0278000 | OsVQ1 | Detail |
| CX1g000790 | 1:8,765,248-8,790,471 | - | C1H1g30954 | C2H1g28131 | LOC_Os03g42050 | Os03g0616700 | - | Detail |
| CX1g000984 | 1:8,776,691-8,776,891 | + | - | - | - | - | - | Detail |
| CX1g000102 | 1:8,793,072-8,793,312 | + | - | - | - | - | - | Detail |
| CX1g004265 | 1:8,828,869-8,833,980 | + | C1H1g02087 | C2H1g16144 | LOC_Os01g17070 | Os01g0278600 | - | Detail |
| CX1g006647 | 1:8,837,670-8,845,252 | + | C1H1g02797 | C2H1g08246 | LOC_Os01g17130 | Os01g0186000 | WRKY10 | Detail |
| CX1g001055 | 1:8,846,499-8,846,696 | - | - | - | - | - | - | Detail |