| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g30168 | 1:28,289,444-28,299,703 | - | C1H1g02918 | CX1g003911 | LOC_Os01g55170 | Os01g0756400 | - | Detail |
| C2H1g05126 | 1:28,304,985-28,308,924 | + | C1H1g08295 | CX1g003221 | LOC_Os01g55190 | Os01g0756600 | - | Detail |
| C2H1g22597 | 1:28,318,179-28,320,472 | + | C1H1g21813 | CX1g002081 | LOC_Os01g55200 | Os01g0756700 | KAT1, OsKAT1 | Detail |
| C2H1g23299 | 1:28,338,570-28,340,635 | + | C1H1g15032 | CX1g004140 | LOC_Os01g55240 | Os01g0757200 | GA2OX3, OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3 | Detail |
| C2H1g18562 | 1:28,350,390-28,354,778 | + | C1H1g13228 | CX1g001542 | LOC_Os01g55260 | Os01g0757400 | - | Detail |
| C2H1g15915 | 1:28,355,293-28,358,083 | - | C1H1g20677 | CX1g000631 | LOC_Os01g55270 | Os01g0757500 | - | Detail |
| C2H1g24400 | 1:28,364,442-28,366,634 | - | C1H1g01435 | CX1g004257 | LOC_Os01g55280 | Os01g0757600 | - | Detail |
| C2H1g24899 | 1:28,374,828-28,378,687 | - | C1H1g01756 | CX1g006495 | LOC_Os01g55290 | Os01g0757700 | - | Detail |
| C2H1g22215 | 1:28,378,797-28,384,540 | + | C1H1g09106 | CX1g003762 | LOC_Os01g55300 | Os01g0757800 | - | Detail |
| C2H1g22679 | 1:28,384,600-28,387,735 | - | C1H1g06019 | CX1g005426 | LOC_Os01g55310 | Os01g0757900 | - | Detail |
| C2H1g13025 | 1:28,389,007-28,389,551 | - | C1H1g04207 | CX1g002989 | LOC_Os01g55320 | Os01g0758000 | - | Detail |
| C2H1g30086 | 1:28,407,994-28,413,990 | - | C1H1g13262 | CX1g006023 | LOC_Os01g55350 | Os01g0758300 | - | Detail |
| C2H1g17375 | 1:28,418,167-28,425,943 | - | - | - | - | - | - | Detail |
| C2H1g29396 | 1:28,473,173-28,476,145 | + | C1H1g00696 | CX1g004565 | LOC_Os01g55410 | Os01g0758900 | - | Detail |
| C2H1g14233 | 1:28,482,003-28,482,901 | + | C1H1g24935 | CX1g005946 | LOC_Os01g55420 | Os01g0759000 | - | Detail |
| C2H1g23330 | 1:28,483,746-28,485,982 | - | C1H1g27055 | CX1g002012 | LOC_Os01g55430 | Os01g0759100 | - | Detail |
| C2H1g17948 | 1:28,489,485-28,490,378 | + | C1H1g18342 | CX1g006544 | - | Os01g0159000 | OsDOG1L-1 | Detail |
| C2H1g19008 | 1:28,499,891-28,504,941 | - | C1H1g03820 | CX1g003443 | LOC_Os01g55450 | Os01g0759400 | - | Detail |
| C2H1g00211 | 1:28,513,090-28,517,518 | + | C1H1g27932 | CX1g002187 | LOC_Os01g55490 | Os01g0759700 | - | Detail |
| C2H1g11945 | 1:28,519,831-28,523,993 | + | C1H1g25715 | CX1g003122 | LOC_Os01g55500 | Os01g0759900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003572 | 1:8,629,773-8,634,743 | - | C1H1g17187 | C2H1g21617 | LOC_Os01g16910 | Os01g0276200 | OsVDAC7 | Detail |
| CX1g005233 | 1:8,639,334-8,640,162 | + | C1H1g02811 | C2H1g10026 | LOC_Os01g16920 | Os01g0276300 | OsLEA1b | Detail |
| CX1g001016 | 1:8,642,688-8,644,124 | - | - | C2H1g04825 | LOC_Os01g16930 | Os01g0276400 | - | Detail |
| CX1g003930 | 1:8,644,902-8,648,614 | - | C1H1g24775 | C2H1g11604 | LOC_Os01g16940 | Os01g0276500 | - | Detail |
| CX1g004479 | 1:8,650,048-8,651,085 | + | C1H1g22295 | C2H1g06104 | LOC_Os01g16950 | Os01g0276600 | - | Detail |
| CX1g001281 | 1:8,653,655-8,658,869 | - | C1H1g24762 | C2H1g19690 | LOC_Os01g16960 | Os01g0276700 | - | Detail |
| CX1g002381 | 1:8,661,840-8,669,329 | - | C1H1g09923 | C2H1g18824 | LOC_Os01g16970 | Os01g0276800 | - | Detail |
| CX1g006477 | 1:8,700,110-8,703,702 | + | C1H1g21978 | C2H1g19986 | LOC_Os01g17000 | Os01g0277500 | OsDof4 | Detail |
| CX1g007267 | 1:8,704,643-8,710,744 | - | C1H1g27208 | C2H1g07072 | LOC_Os01g17010 | Os01g0277600 | - | Detail |
| CX1g002837 | 1:8,714,498-8,714,668 | - | - | - | - | - | - | Detail |
| CX1g005265 | 1:8,716,638-8,719,782 | + | C1H1g17418 | C2H1g19392 | LOC_Os01g17020 | Os01g0277700 | - | Detail |
| CX1g005153 | 1:8,723,851-8,732,251 | + | C1H1g04503 | C2H1g04598 | LOC_Os01g17040 | Os01g0277900 | - | Detail |
| CX1g006471 | 1:8,734,560-8,734,934 | + | C1H6g20429 | - | - | - | - | Detail |
| CX1g000586 | 1:8,740,974-8,741,687 | - | - | C2H1g29384 | LOC_Os01g17050 | Os01g0278000 | OsVQ1 | Detail |
| CX1g000790 | 1:8,765,248-8,790,471 | - | C1H1g30954 | C2H1g28131 | LOC_Os03g42050 | Os03g0616700 | - | Detail |
| CX1g000984 | 1:8,776,691-8,776,891 | + | - | - | - | - | - | Detail |
| CX1g000102 | 1:8,793,072-8,793,312 | + | - | - | - | - | - | Detail |
| CX1g004265 | 1:8,828,869-8,833,980 | + | C1H1g02087 | C2H1g16144 | LOC_Os01g17070 | Os01g0278600 | - | Detail |
| CX1g006647 | 1:8,837,670-8,845,252 | + | C1H1g02797 | C2H1g08246 | LOC_Os01g17130 | Os01g0186000 | WRKY10 | Detail |
| CX1g001055 | 1:8,846,499-8,846,696 | - | - | - | - | - | - | Detail |