| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g17767 | 4:16,868,902-16,869,123 | - | - | - | - | - | - | Detail |
| C2H4g27588 | 4:16,874,997-16,878,447 | - | C1H4g17832 | CX4g033505 | LOC_Os04g32950 | Os04g0402100 | - | Detail |
| C2H4g29861 | 4:16,883,499-16,891,971 | - | C1H4g28962 | CX4g033647 | LOC_Os04g32960 | Os04g0402200 | - | Detail |
| C2H4g17148 | 4:16,896,931-16,899,506 | + | C1H4g29248 | CX4g036231 | LOC_Os04g32970 | Os04g0402300 | - | Detail |
| C2H4g06982 | 4:16,903,917-16,904,946 | - | C1H4g15778 | CX4g035592 | LOC_Os04g32980 | Os04g0402500 | - | Detail |
| C2H4g06461 | 4:16,978,397-16,980,226 | + | C1H4g07240 | CX4g036153 | LOC_Os04g33030 | Os04g0403200 | - | Detail |
| C2H4g07757 | 4:16,989,488-16,993,477 | + | C1H4g07835 | CX4g034608 | LOC_Os04g33040 | Os04g0403300 | - | Detail |
| C2H4g27026 | 4:16,993,858-16,998,974 | + | C1H4g10687 | CX4g034506 | LOC_Os04g33050 | Os04g0403400 | - | Detail |
| C2H4g06142 | 4:16,999,493-17,003,341 | + | C1H4g21762 | CX4g033005 | LOC_Os04g33060 | Os04g0403500 | - | Detail |
| C2H4g05650 | 4:17,004,934-17,009,037 | - | C1H4g16707 | CX4g036347 | LOC_Os04g33080 | Os04g0403701 | - | Detail |
| C2H4g08188 | 4:17,033,625-17,034,330 | - | C1H4g29160 | CX4g031400 | LOC_Os04g33110 | Os04g0403900 | - | Detail |
| C2H4g05726 | 4:17,038,269-17,038,834 | - | C1H4g22277 | CX4g033687 | - | - | - | Detail |
| C2H4g02595 | 4:17,055,126-17,056,283 | - | C1H4g01070 | CX4g032114 | LOC_Os04g33150 | Os04g0404400 | TRD4.2 | Detail |
| C2H4g12964 | 4:17,068,439-17,073,756 | + | C1H4g19552 | CX4g035122 | LOC_Os04g33190 | Os04g0404800 | - | Detail |
| C2H4g17158 | 4:17,074,363-17,082,574 | - | C1H4g09341 | CX4g034399 | LOC_Os04g33200 | Os04g0404900 | - | Detail |
| C2H4g18122 | 4:17,087,925-17,093,114 | + | C1H4g00203 | CX4g034889 | LOC_Os04g33210 | Os04g0405000 | - | Detail |
| C2H4g07819 | 4:17,093,907-17,096,569 | - | C1H4g26027 | CX4g033742 | LOC_Os04g33220 | Os04g0405100 | - | Detail |
| C2H4g04199 | 4:17,105,211-17,106,150 | - | C1H4g16846 | CX4g034969 | LOC_Os04g33240 | Os04g0405300 | - | Detail |
| C2H4g22752 | 4:17,116,785-17,117,978 | - | C1H4g08512 | CX4g035634 | LOC_Os04g33260 | Os04g0405500 | - | Detail |
| C2H4g29855 | 4:17,120,942-17,127,086 | - | C1H4g22964 | CX4g036572 | LOC_Os04g33280 | Os04g0405600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021160 | 2:495,307-497,239 | - | C1H2g26662 | C2H2g23609 | LOC_Os02g01980 | Os02g0110000 | - | Detail |
| CX2g019661 | 2:498,610-499,342 | - | C1H2g03385 | C2H2g18278 | LOC_Os02g01990 | Os02g0110100 | DHD4 | Detail |
| CX2g024808 | 2:503,652-505,115 | + | C1H2g25496 | - | LOC_Os02g02000 | Os02g0110200 | - | Detail |
| CX2g023470 | 2:510,771-510,994 | - | - | - | - | - | - | Detail |
| CX2g022683 | 2:511,836-514,079 | - | C1H2g30076 | C2H2g01592 | LOC_Os02g02020 | Os02g0110400 | OsCPPR1 | Detail |
| CX2g020339 | 2:517,118-519,410 | - | C1H2g22020 | C2H2g23344 | LOC_Os02g02040 | Os02g0110600 | - | Detail |
| CX2g023145 | 2:523,142-523,666 | + | C1H2g25885 | C2H2g09423 | - | Os02g0110650 | - | Detail |
| CX2g020170 | 2:524,446-540,386 | - | C1H2g28737 | C2H2g11436 | LOC_Os02g02050 | Os02g0110700 | - | Detail |
| CX2g024805 | 2:554,459-558,698 | + | C1H2g03642 | C2H2g28219 | LOC_Os02g02110 | - | - | Detail |
| CX2g023278 | 2:559,446-562,081 | - | C1H2g03397 | C2H2g25923 | LOC_Os02g02120 | Os02g0111600 | OsWAK11 | Detail |
| CX2g022213 | 2:563,478-565,466 | + | C1H2g11275 | C2H2g28301 | LOC_Os02g02130 | Os02g0111700 | - | Detail |
| CX2g021036 | 2:569,017-572,145 | - | C1H2g19068 | C2H2g20482 | LOC_Os02g02140 | Os02g0111800 | - | Detail |
| CX2g020132 | 2:578,380-581,163 | + | C1H2g08619 | C2H2g07259 | LOC_Os02g02150 | Os02g0111900 | - | Detail |
| CX2g024174 | 2:582,699-583,525 | - | C1H2g30533 | C2H2g15382 | LOC_Os02g02160 | Os02g0112000 | - | Detail |
| CX2g019975 | 2:586,725-588,326 | + | C1H2g31025 | - | LOC_Os02g02170 | Os02g0112100 | NRT2.1, OsNRT2.1, OsNRT2.2 | Detail |
| CX2g018919 | 2:591,275-591,535 | - | - | - | - | - | - | Detail |
| CX2g023945 | 2:597,311-597,523 | + | - | - | - | - | - | Detail |
| CX2g024535 | 2:598,098-599,699 | - | C1H2g03728 | - | LOC_Os02g02170 | Os02g0112600 | NRT2.2, OsNRT2.2, OsNRT2.1 | Detail |
| CX2g023370 | 2:602,689-602,883 | - | - | - | - | - | - | Detail |
| CX2g019924 | 2:603,910-615,824 | - | C1H2g07735 | C2H2g17743 | LOC_Os02g02210 | Os02g0112900 | OsGABA-T | Detail |