| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g28105 | 5:24,111,796-24,112,707 | - | C1H5g30015 | CX5g037651 | LOC_Os05g50160 | Os05g0577100 | - | Detail |
| C2H5g16560 | 5:24,119,207-24,123,823 | - | C1H5g15586 | CX5g040119 | LOC_Os05g50170 | Os05g0577200 | - | Detail |
| C2H5g18251 | 5:24,125,998-24,126,519 | - | C1H5g18973 | CX5g040982 | LOC_Os05g50180 | Os05g0577500 | - | Detail |
| C2H5g07752 | 5:24,128,176-24,141,377 | - | C1H5g14939 | CX5g037985 | LOC_Os05g50200 | Os05g0577800 | - | Detail |
| C2H5g09946 | 5:24,142,380-24,146,743 | - | C1H5g25502 | CX5g040371 | LOC_Os05g50210 | Os05g0577900 | - | Detail |
| C2H5g10460 | 5:24,147,354-24,149,591 | + | C1H5g03913 | CX5g036982 | LOC_Os05g50220 | Os05g0578000 | - | Detail |
| C2H5g03748 | 5:24,153,325-24,154,242 | - | C1H5g20150 | CX5g037412 | LOC_Os05g50230 | Os05g0578100 | - | Detail |
| C2H5g13618 | 5:24,162,476-24,167,600 | + | C1H5g22642 | CX5g040349 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| C2H5g26536 | 5:24,167,680-24,168,015 | + | C1H5g05740 | CX5g040349 | LOC_Os05g50250 | Os05g0578500 | - | Detail |
| C2H5g20774 | 5:24,169,397-24,170,344 | - | C1H5g30673 | CX5g039172 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| C2H5g28332 | 5:24,174,131-24,177,534 | - | C1H5g30673 | CX5g039590 | LOC_Os05g50260 | Os05g0578600 | - | Detail |
| C2H5g01414 | 5:24,178,489-24,179,683 | + | C1H5g18644 | CX5g038128 | - | - | - | Detail |
| C2H5g06442 | 5:24,180,855-24,181,193 | + | - | - | - | - | - | Detail |
| C2H5g24268 | 5:24,188,936-24,189,860 | + | C1H5g30824 | CX5g037556 | LOC_Os05g50270 | Os05g0578900 | NL1, nl1, OsGATA15, SNFL1 | Detail |
| C2H5g28493 | 5:24,190,618-24,195,475 | - | C1H5g28939 | CX5g037802 | LOC_Os05g50280 | Os05g0579000 | OsERD5 | Detail |
| C2H5g09709 | 5:24,202,249-24,203,250 | + | C1H5g17437 | CX5g037992 | LOC_Os05g50290 | Os05g0579100 | - | Detail |
| C2H5g24355 | 5:24,205,657-24,207,606 | + | C1H5g00625 | CX5g039421 | LOC_Os05g50300 | Os05g0579200 | - | Detail |
| C2H5g30078 | 5:24,210,212-24,210,937 | + | C1H5g28773 | CX5g038909 | LOC_Os05g50310 | Os05g0579300 | - | Detail |
| C2H5g20837 | 5:24,220,960-24,221,858 | - | C1H8g13275 | CX5g038520 | - | - | - | Detail |
| C2H5g16972 | 5:24,223,244-24,223,831 | - | C1H5g25217 | CX5g037463 | LOC_Os05g50340 | Os05g0579600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021440 | 2:192,126-192,728 | - | C1H2g08174 | C2H2g27196 | LOC_Os02g01310 | Os02g0103300 | OsPMEI6 | Detail |
| CX2g021889 | 2:197,919-198,230 | + | - | - | - | - | - | Detail |
| CX2g021507 | 2:199,185-206,052 | - | C1H2g30479 | C2H2g16016 | LOC_Os02g01326 | Os02g0103500 | - | Detail |
| CX2g019603 | 2:207,456-208,869 | - | C1H2g27127 | C2H2g08514 | LOC_Os02g01332 | Os02g0103700 | - | Detail |
| CX2g020827 | 2:209,352-210,708 | - | C1H2g03431 | C2H2g13645 | LOC_Os02g01340 | Os02g0103800 | - | Detail |
| CX2g018866 | 2:212,269-217,631 | - | C1H2g11222 | C2H2g30264 | LOC_Os02g01350 | Os02g0103900 | - | Detail |
| CX2g020829 | 2:223,141-223,458 | + | C1H2g19728 | C2H2g08094 | LOC_Os02g01355 | Os02g0104100 | - | Detail |
| CX2g018966 | 2:227,476-231,470 | + | C1H2g28328 | C2H2g27871 | LOC_Os02g01360 | Os02g0104200 | - | Detail |
| CX2g019468 | 2:245,760-248,534 | - | C1H2g16519 | C2H2g24735 | LOC_Os02g01380 | Os02g0104500 | - | Detail |
| CX2g023507 | 2:270,952-274,794 | + | C1H2g14546 | C2H2g17888 | LOC_Os02g01440 | Os02g0104700 | - | Detail |
| CX2g023194 | 2:275,478-278,180 | + | C1H2g08400 | C2H2g21478 | LOC_Os02g01450 | Os02g0104800 | - | Detail |
| CX2g018836 | 2:279,260-281,558 | + | C1H2g29528 | C2H2g01204 | LOC_Os02g01480 | Os02g0105000 | - | Detail |
| CX2g021940 | 2:283,598-289,813 | + | C1H2g29383 | C2H2g05998 | LOC_Os02g01490 | Os02g0105100 | - | Detail |
| CX2g023207 | 2:292,476-298,238 | + | C1H2g28235 | C2H2g09640 | LOC_Os02g01500 | Os02g0105200 | - | Detail |
| CX2g021696 | 2:300,292-302,626 | + | C1H2g28206 | C2H2g21231 | LOC_Os02g01510 | Os02g0105400 | - | Detail |
| CX2g019294 | 2:312,948-315,560 | + | C1H2g11350 | C2H2g25519 | LOC_Os02g01520 | Os02g0105500 | - | Detail |
| CX2g023790 | 2:318,031-320,668 | - | C1H2g25324 | C2H2g13554 | LOC_Os02g01550 | Os02g0105800 | - | Detail |
| CX2g022675 | 2:322,568-324,615 | - | C1H2g12279 | C2H2g04904 | LOC_Os02g01560 | Os02g0105900 | - | Detail |
| CX2g024828 | 2:335,513-338,982 | + | C1H2g27715 | C2H2g14375 | LOC_Os02g01590 | Os02g0106100 | OsVIN2, SGS1 | Detail |
| CX2g024579 | 2:340,450-340,806 | + | - | - | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |