| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g23293 | 9:17,237,498-17,241,720 | - | C1H9g12508 | CX9g056886 | LOC_Os09g34990 | Os09g0521800 | - | Detail |
| C2H9g12959 | 9:17,244,294-17,248,356 | + | C1H9g22775 | CX9g058042 | LOC_Os09g35000 | Os09g0521900 | RAD, OsGEN1, rad, rad*, OsRAD, GEN1, OsGEN-L | Detail |
| C2H9g15101 | 9:17,249,838-17,250,716 | + | - | - | - | - | - | Detail |
| C2H9g06843 | 9:17,263,090-17,263,671 | + | - | CX11g014678 | - | - | - | Detail |
| C2H9g00413 | 9:17,263,682-17,263,970 | + | - | - | - | - | - | Detail |
| C2H9g13075 | 9:17,315,214-17,317,637 | - | C1H9g22926 | CX9g057513 | LOC_Os09g35630 | Os09g0524800 | - | Detail |
| C2H9g25776 | 9:17,325,847-17,329,040 | + | C1H9g31662 | CX9g056603 | LOC_Os09g35670 | Os09g0525200 | - | Detail |
| C2H9g21918 | 9:17,329,621-17,332,264 | - | C1H9g25445 | CX9g055378 | LOC_Os09g35680 | Os09g0525300 | - | Detail |
| C2H9g18090 | 9:17,332,743-17,333,235 | + | - | - | - | - | - | Detail |
| C2H9g16534 | 9:17,336,698-17,341,474 | - | C1H9g08911 | CX9g058055 | LOC_Os09g35690 | Os09g0525400 | E3BB | Detail |
| C2H9g00761 | 9:17,342,206-17,342,619 | + | C1H9g02024 | CX9g057849 | LOC_Os09g35700 | Os09g0525500 | - | Detail |
| C2H9g16855 | 9:17,343,281-17,348,296 | - | C1H9g15317 | CX9g057451 | LOC_Os09g35710 | Os09g0525600 | - | Detail |
| C2H9g29379 | 9:17,350,467-17,356,488 | - | C1H9g29308 | CX9g057247 | LOC_Os09g35720 | Os09g0525700 | - | Detail |
| C2H9g07857 | 9:17,358,469-17,361,650 | - | C1H9g08625 | CX9g055034 | LOC_Os09g35730 | Os09g0525900 | - | Detail |
| C2H9g18140 | 9:17,365,844-17,367,855 | + | C1H9g31758 | CX9g054877 | LOC_Os09g35740 | - | - | Detail |
| C2H9g08359 | 9:17,379,953-17,386,025 | - | C1H9g21556 | CX9g057694 | LOC_Os09g35760 | Os09g0526300 | - | Detail |
| C2H9g23914 | 9:17,398,899-17,399,452 | - | C1H9g12923 | - | - | - | - | Detail |
| C2H9g25457 | 9:17,401,310-17,402,916 | - | C1H9g05187 | CX9g056876 | LOC_Os09g35790 | Os09g0526600 | - | Detail |
| C2H9g28414 | 9:17,408,099-17,410,200 | - | C1H9g15216 | CX9g055153 | LOC_Os09g35800 | Os09g0526700 | - | Detail |
| C2H9g05438 | 9:17,413,778-17,416,569 | - | C1H9g04329 | CX9g057418 | LOC_Os09g35810 | Os09g0526800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016277 | 12:23,111,518-23,112,492 | - | C1H12g12243 | C2H12g15193 | - | - | - | Detail |
| CX12g015917 | 12:23,118,674-23,119,015 | - | C1H12g20368 | C2H12g11003 | LOC_Os12g44270 | Os12g0640000 | - | Detail |
| CX12g017933 | 12:23,123,025-23,124,732 | - | C1H12g04320 | C2H12g17392 | LOC_Os12g44290 | Os12g0640200 | - | Detail |
| CX12g015809 | 12:23,132,380-23,134,830 | + | C1H12g25588 | C2H12g26259 | LOC_Os12g44300 | Os12g0640500 | - | Detail |
| CX12g016104 | 12:23,135,706-23,141,890 | + | C1H12g07092 | C2H12g26259 | LOC_Os12g44310 | Os12g0640600 | OsCCD1 | Detail |
| CX12g017292 | 12:23,145,077-23,147,788 | + | C1H12g03870 | C2H12g15859 | LOC_Os12g44320 | Os12g0640700 | MAK11 | Detail |
| CX12g015512 | 12:23,152,403-23,157,754 | - | C1H12g21833 | C2H12g05373 | LOC_Os12g44330 | Os12g0640800 | - | Detail |
| CX12g016266 | 12:23,158,475-23,162,073 | + | C1H12g21532 | C2H12g08906 | LOC_Os12g44340 | Os12g0640900 | - | Detail |
| CX12g018749 | 12:23,163,027-23,164,254 | + | C1H12g06585 | C2H12g02190 | LOC_Os12g44350 | Os12g0163700 | - | Detail |
| CX12g018726 | 12:23,166,330-23,178,613 | - | C1H12g05859 | C2H12g10753 | LOC_Os12g44360 | - | - | Detail |
| CX12g018263 | 12:23,182,183-23,183,181 | + | C1H12g14017 | C2H12g25787 | LOC_Os12g44370 | Os12g0641300 | - | Detail |
| CX12g015501 | 12:23,183,868-23,187,516 | - | C1H12g21831 | C2H12g09488 | LOC_Os12g44380 | Os12g0641400 | OsSUT2, SUT2 | Detail |
| CX12g017711 | 12:23,188,745-23,200,233 | - | C1H12g10597 | C2H12g27703 | LOC_Os12g44390 | Os12g0641500 | - | Detail |
| CX2g023977 | 2:41,030-45,406 | - | C1H2g15340 | C2H2g24633 | LOC_Os02g01010 | Os02g0100100 | - | Detail |
| CX2g024132 | 2:46,757-50,830 | - | C1H2g25552 | C2H2g25972 | LOC_Os02g01020 | Os02g0100200 | - | Detail |
| CX2g021711 | 2:50,300-50,773 | + | C1H2g14750 | - | - | Os02g0100250 | - | Detail |
| CX2g018900 | 2:51,262-55,428 | + | C1H2g16694 | C2H2g28151 | LOC_Os02g01030 | Os02g0100300 | OsHSP40, HSP40 | Detail |
| CX2g023512 | 2:63,393-64,022 | + | C1H2g22716 | - | LOC_Os02g01060 | Os02g0100600 | - | Detail |
| CX2g022069 | 2:66,625-72,788 | + | C1H2g30224 | C2H2g28833 | LOC_Os02g01070 | Os02g0100700 | - | Detail |
| CX2g020494 | 2:74,635-75,462 | - | C1H2g31101 | - | LOC_Os02g01080 | Os02g0100800 | - | Detail |