| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g04729 | 3:4,611,926-4,613,460 | - | C2H3g24222 | CX3g030929 | LOC_Os03g10210 | Os03g0198600 | HOX12, Oshox12, OsHox12, GT1 | Detail |
| C1H3g24941 | 3:4,626,118-4,626,506 | + | C2H3g01513 | - | - | - | - | Detail |
| C1H3g23090 | 3:4,634,713-4,636,287 | - | C2H3g16295 | CX3g026889 | LOC_Os03g10220 | - | - | Detail |
| C1H3g13438 | 3:4,637,520-4,640,553 | - | C2H3g19804 | CX3g026154 | LOC_Os03g10224 | Os03g0198900 | - | Detail |
| C1H3g16749 | 3:4,640,745-4,645,102 | + | C2H3g09522 | CX3g028745 | LOC_Os03g10230 | Os03g0199000 | - | Detail |
| C1H3g12272 | 3:4,650,035-4,651,210 | + | C2H3g01585 | CX3g029096 | LOC_Os03g10240 | Os03g0199100 | - | Detail |
| C1H3g00274 | 3:4,660,923-4,662,003 | - | C2H3g23420 | CX3g031305 | LOC_Os03g10260 | Os03g0199500 | - | Detail |
| C1H3g07008 | 3:4,678,681-4,679,923 | + | C2H3g26891 | CX3g025392 | LOC_Os03g10300 | Os03g0200000 | - | Detail |
| C1H3g12286 | 3:4,687,802-4,689,563 | + | C2H3g01636 | CX3g029912 | LOC_Os03g10320 | Os03g0200200 | - | Detail |
| C1H3g29696 | 3:4,695,612-4,696,359 | + | C2H3g23926 | CX3g028962 | - | - | - | Detail |
| C1H3g13020 | 3:4,697,511-4,699,802 | + | C2H3g07176 | CX3g025427 | LOC_Os03g10340 | Os03g0200500 | - | Detail |
| C1H3g29298 | 3:4,699,933-4,704,069 | - | C2H3g17766 | CX3g027963 | LOC_Os03g10350 | Os03g0200600 | OsTPR075 | Detail |
| C1H3g01933 | 3:4,707,172-4,710,106 | - | C2H3g08890 | CX3g025362 | LOC_Os03g10360 | Os03g0200700 | - | Detail |
| C1H3g30301 | 3:4,711,278-4,713,578 | - | C2H3g09465 | CX3g031231 | LOC_Os03g10370 | Os03g0200800 | - | Detail |
| C1H3g28372 | 3:4,717,317-4,719,594 | + | C2H3g19650 | CX3g028366 | LOC_Os03g10390 | Os03g0201000 | - | Detail |
| C1H3g07769 | 3:4,719,979-4,724,128 | - | C2H3g21201 | CX3g026809 | LOC_Os03g10400 | Os03g0201100 | - | Detail |
| C1H3g03267 | 3:4,724,286-4,726,332 | + | C2H3g08749 | - | LOC_Os03g10410 | Os03g0201200 | - | Detail |
| C1H3g26783 | 3:4,726,856-4,729,237 | + | C2H3g27980 | CX3g027641 | LOC_Os03g10420 | Os03g0201400 | - | Detail |
| C1H3g14289 | 3:4,739,963-4,742,807 | + | C2H3g05108 | CX3g026129 | LOC_Os03g10440 | Os03g0201500 | OsMORE1a | Detail |
| C1H3g07517 | 3:4,743,790-4,746,012 | - | C2H3g04674 | CX3g029780 | LOC_Os03g10450 | Os03g0201600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018727 | 12:22,986,997-22,988,736 | - | C1H12g02399 | C2H12g12706 | LOC_Os12g44070 | Os12g0637800 | - | Detail |
| CX12g017391 | 12:22,993,222-22,994,502 | - | C1H12g29884 | C2H12g27199 | LOC_Os12g44080 | Os12g0637900 | - | Detail |
| CX12g016299 | 12:22,997,508-23,001,081 | - | C1H12g01167 | C2H12g11486 | LOC_Os12g44090 | Os12g0638100 | - | Detail |
| CX12g018788 | 12:23,003,500-23,008,463 | - | C1H12g29501 | C2H12g17983 | LOC_Os12g44100 | Os12g0638200 | OsNPF2.2 | Detail |
| CX12g018537 | 12:23,018,722-23,019,282 | + | C1H8g27394 | C2H2g22829 | - | Os01g0304500 | - | Detail |
| CX12g016589 | 12:23,021,238-23,025,876 | + | - | C2H12g22341 | LOC_Os12g37050 | - | - | Detail |
| CX12g017673 | 12:23,026,766-23,028,520 | - | C1H12g04509 | C2H12g19813 | LOC_Os12g44110 | Os12g0638300 | - | Detail |
| CX12g017445 | 12:23,037,252-23,039,732 | + | C1H12g15698 | C2H12g20085 | LOC_Os12g44130 | Os12g0638400 | - | Detail |
| CX12g018736 | 12:23,041,470-23,044,783 | + | C1H12g01101 | C2H12g27409 | LOC_Os12g44140 | Os12g0638600 | - | Detail |
| CX12g015362 | 12:23,048,895-23,055,283 | + | C1H12g01740 | C2H12g30262 | LOC_Os12g44150 | Os12g0638700 | - | Detail |
| CX12g017047 | 12:23,056,366-23,060,358 | + | C1H12g24197 | C2H12g05046 | LOC_Os12g44160 | Os12g0638800 | - | Detail |
| CX12g017480 | 12:23,060,922-23,063,498 | - | C1H12g26047 | C2H12g20406 | LOC_Os12g44170 | Os12g0638900 | - | Detail |
| CX12g018521 | 12:23,069,588-23,072,723 | + | C1H12g17835 | C2H12g20478 | LOC_Os12g44180 | Os12g0639100 | - | Detail |
| CX12g015112 | 12:23,074,419-23,074,595 | - | C1H12g25115 | - | - | - | - | Detail |
| CX12g016287 | 12:23,075,357-23,076,931 | - | C1H12g02702 | C2H12g03407 | LOC_Os12g44190 | Os12g0639200 | - | Detail |
| CX12g016375 | 12:23,082,504-23,083,271 | + | C1H12g02702 | C2H12g10541 | LOC_Os12g44210 | Os12g0639400 | - | Detail |
| CX12g018574 | 12:23,085,849-23,087,393 | + | C1H12g25899 | C2H12g14339 | LOC_Os12g44220 | Os12g0639500 | - | Detail |
| CX12g016975 | 12:23,092,646-23,097,215 | + | C1H12g11343 | C2H12g13699 | LOC_Os12g44230 | Os12g0639600 | - | Detail |
| CX12g015243 | 12:23,098,606-23,100,787 | + | C1H12g28623 | C2H12g23325 | LOC_Os12g44240 | Os12g0639700 | - | Detail |
| CX12g017847 | 12:23,101,740-23,103,272 | + | C1H12g14677 | C2H12g04626 | LOC_Os12g44250 | Os12g0639800 | - | Detail |