| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06770 | 2:9,086,090-9,092,576 | - | C1H2g04839 | CX2g020121 | LOC_Os02g17460 | Os02g0274600 | - | Detail |
| C2H2g25557 | 2:9,094,416-9,095,481 | + | C1H2g13080 | - | - | - | - | Detail |
| C2H2g12255 | 2:9,097,550-9,100,200 | + | C1H2g13080 | CX2g019862 | LOC_Os02g17470 | Os02g0274700 | - | Detail |
| C2H2g07148 | 2:9,111,459-9,118,310 | + | C1H2g20851 | CX2g020679 | LOC_Os02g17500 | Os02g0274900 | - | Detail |
| C2H2g16988 | 2:9,123,672-9,124,927 | + | C1H2g27766 | CX2g021332 | LOC_Os02g17520 | Os02g0275100 | - | Detail |
| C2H2g25493 | 2:9,125,762-9,131,981 | - | C1H2g18414 | CX2g022654 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| C2H2g12406 | 2:9,138,853-9,140,072 | + | C1H2g18414 | CX2g022654 | LOC_Os02g17590 | - | - | Detail |
| C2H2g19414 | 2:9,144,370-9,146,293 | + | C1H2g18414 | CX2g022452 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| C2H2g11418 | 2:9,153,298-9,161,883 | - | C1H2g28570 | CX2g024094 | LOC_Os02g17620 | Os02g0276200 | - | Detail |
| C2H2g13253 | 2:9,188,438-9,191,184 | - | C1H2g09318 | CX2g019729 | LOC_Os02g17640 | Os02g0276400 | - | Detail |
| C2H2g02640 | 2:9,192,146-9,200,452 | - | C1H2g06211 | CX2g023106 | LOC_Os02g17650 | Os02g0276500 | OsVTE1 | Detail |
| C2H2g17601 | 2:9,224,532-9,226,293 | - | - | - | - | - | - | Detail |
| C2H2g21214 | 2:9,227,200-9,234,095 | - | C1H2g04949 | CX2g020993 | LOC_Os02g17680 | Os02g0276900 | - | Detail |
| C2H2g16961 | 2:9,244,502-9,246,511 | - | - | - | - | - | - | Detail |
| C2H2g07248 | 2:9,245,242-9,247,742 | + | C1H2g26261 | CX2g020060 | LOC_Os11g06800 | Os02g0231600 | - | Detail |
| C2H2g23233 | 2:9,251,488-9,256,684 | + | C1H2g06748 | CX2g023495 | LOC_Os02g17700 | Os02g0277600 | - | Detail |
| C2H2g21422 | 2:9,257,574-9,260,172 | - | C1H2g21417 | CX2g019451 | LOC_Os02g17710 | Os02g0277700 | - | Detail |
| C2H2g09294 | 2:9,267,786-9,272,819 | + | C1H2g04601 | CX2g022207 | LOC_Os02g17760 | Os02g0278400 | - | Detail |
| C2H2g18932 | 2:9,270,435-9,271,883 | - | - | - | - | Os02g0278450 | - | Detail |
| C2H2g03135 | 2:9,276,565-9,287,809 | - | C1H2g04831 | CX2g024821 | LOC_Os02g17780 | Os02g0278700 | OsCPS1, OsCPS1<sub>ent</sub> | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015217 | 12:22,549,073-22,551,888 | + | C1H12g13478 | C2H12g29464 | LOC_Os12g43130 | Os12g0626400 | OsPSY2 | Detail |
| CX12g016973 | 12:22,553,632-22,566,461 | + | C1H12g12539 | C2H12g10388 | LOC_Os12g43120 | Os12g0626300 | - | Detail |
| CX12g018336 | 12:22,569,169-22,569,552 | - | C1H12g21734 | C2H12g07513 | LOC_Os12g43110 | Os12g0626200 | - | Detail |
| CX12g015621 | 12:22,575,602-22,578,061 | + | C1H12g05248 | C2H12g04489 | LOC_Os12g43100 | Os12g0626100 | - | Detail |
| CX12g016105 | 12:22,578,523-22,581,818 | - | C1H12g18708 | C2H12g15160 | LOC_Os12g43070 | - | - | Detail |
| CX12g015683 | 12:22,583,579-22,587,501 | + | C1H12g07880 | C2H12g27340 | LOC_Os12g43300 | Os12g0612625 | - | Detail |
| CX12g015346 | 12:22,588,079-22,588,366 | + | C1H12g22055 | C2H12g28418 | LOC_Os12g43300 | - | - | Detail |
| CX12g017695 | 12:22,612,207-22,612,958 | - | C1H12g11976 | C2H12g08225 | LOC_Os12g43340 | Os12g0628100 | - | Detail |
| CX12g016076 | 12:22,618,830-22,619,828 | + | C1H12g20248 | C2H12g26158 | LOC_Os12g43350 | Os12g0628300 | - | Detail |
| CX12g016525 | 12:22,622,993-22,623,538 | - | C1H12g26342 | - | - | - | - | Detail |
| CX12g016182 | 12:22,627,395-22,628,715 | + | C1H12g17443 | C2H12g10828 | LOC_Os12g43363 | Os12g0628400 | - | Detail |
| CX12g015409 | 12:22,630,144-22,633,097 | + | C1H12g27093 | C2H12g02542 | LOC_Os12g43370 | Os12g0628500 | - | Detail |
| CX12g015749 | 12:22,640,804-22,641,621 | + | C1H7g20360 | C2H7g10129 | LOC_Os12g38510 | - | - | Detail |
| CX12g016385 | 12:22,650,822-22,654,137 | - | C1H12g10720 | C2H12g29563 | LOC_Os12g43390 | Os12g0629300 | - | Detail |
| CX12g018785 | 12:22,702,510-22,702,719 | - | C1H1g14515 | C2H1g23792 | - | - | - | Detail |
| CX12g015757 | 12:22,704,693-22,705,911 | - | C1H12g31505 | C2H12g14169 | LOC_Os12g43500 | Os12g0278900 | - | Detail |
| CX12g016272 | 12:22,706,579-22,707,240 | + | C1H12g07071 | C2H12g17471 | LOC_Os12g43510 | Os12g0630600 | - | Detail |
| CX12g017936 | 12:22,708,273-22,708,470 | + | - | - | - | Os12g0568166 | - | Detail |
| CX12g015545 | 12:22,716,054-22,719,926 | - | C1H12g22486 | C2H12g09484 | LOC_Os12g43520 | Os12g0630700 | - | Detail |
| CX12g016310 | 12:22,722,484-22,724,492 | - | C1H12g11560 | C2H12g25329 | LOC_Os12g43530 | Os12g0630800 | - | Detail |