| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g17957 | 12:19,825,339-19,828,955 | - | - | - | - | - | - | Detail |
| C2H12g00857 | 12:19,836,424-19,839,405 | - | C1H12g12899 | CX12g015511 | LOC_Os12g38730 | Os12g0576300 | - | Detail |
| C2H12g17120 | 12:19,843,002-19,846,719 | - | C1H12g10259 | CX12g016341 | LOC_Os12g38750 | Os12g0576600 | - | Detail |
| C2H12g04894 | 12:19,854,539-19,857,748 | - | C1H12g21793 | CX12g017028 | LOC_Os12g38760 | Os12g0576700 | - | Detail |
| C2H12g26878 | 12:19,862,311-19,865,959 | - | C1H12g30700 | CX12g016600 | LOC_Os12g38770 | Os12g0576750 | PAP1B, OsPAP1b, NPP2, OsNPP2 | Detail |
| C2H12g26810 | 12:19,867,353-19,873,882 | - | C1H12g05519 | CX12g017595 | LOC_Os12g38780 | Os12g0576900 | - | Detail |
| C2H12g06238 | 12:19,875,946-19,878,170 | + | C1H12g22000 | CX12g017201 | LOC_Os12g38790 | Os12g0577000 | - | Detail |
| C2H12g22098 | 12:19,879,316-19,887,066 | + | C1H12g15638 | CX12g016939 | LOC_Os12g38800 | Os12g0577100 | - | Detail |
| C2H12g08874 | 12:19,892,972-19,894,012 | + | C1H12g30406 | CX12g017608 | LOC_Os12g38810 | Os12g0577200 | - | Detail |
| C2H12g22738 | 12:19,915,029-19,920,428 | + | C1H12g21439 | CX12g015208 | LOC_Os12g38850 | Os12g0577600 | - | Detail |
| C2H12g29158 | 12:19,921,945-19,924,327 | - | C1H12g00519 | CX12g018076 | LOC_Os12g38860 | Os12g0577700 | - | Detail |
| C2H12g06115 | 12:19,928,181-19,934,490 | - | C1H12g00369 | CX12g015574 | LOC_Os12g38870 | Os12g0577800 | - | Detail |
| C2H12g21149 | 12:19,948,275-19,950,104 | - | C1H12g31425 | CX12g017526 | LOC_Os12g38880 | Os12g0578000 | - | Detail |
| C2H12g11743 | 12:19,951,241-19,951,904 | + | C1H12g00225 | CX12g015487 | - | Os12g0530100 | - | Detail |
| C2H12g17013 | 12:19,954,198-19,958,515 | + | C1H12g19103 | CX12g016002 | LOC_Os12g38900 | Os12g0578200 | - | Detail |
| C2H12g27102 | 12:19,961,689-19,962,201 | + | C1H12g25977 | CX12g018018 | LOC_Os12g38910 | Os12g0578300 | - | Detail |
| C2H12g04289 | 12:19,962,292-19,966,033 | + | C1H12g25977 | CX12g018018 | LOC_Os12g38910 | Os12g0578300 | - | Detail |
| C2H12g06963 | 12:19,966,563-19,970,812 | + | C1H12g22422 | CX12g017088 | LOC_Os12g38920 | Os12g0578400 | - | Detail |
| C2H12g18495 | 12:19,971,081-19,976,738 | - | C1H12g15232 | CX12g016623 | LOC_Os12g38930 | Os12g0578500 | - | Detail |
| C2H12g09933 | 12:19,980,215-19,981,300 | - | C1H12g27740 | CX12g015550 | LOC_Os12g38940 | Os12g0578600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015217 | 12:22,549,073-22,551,888 | + | C1H12g13478 | C2H12g29464 | LOC_Os12g43130 | Os12g0626400 | OsPSY2 | Detail |
| CX12g016973 | 12:22,553,632-22,566,461 | + | C1H12g12539 | C2H12g10388 | LOC_Os12g43120 | Os12g0626300 | - | Detail |
| CX12g018336 | 12:22,569,169-22,569,552 | - | C1H12g21734 | C2H12g07513 | LOC_Os12g43110 | Os12g0626200 | - | Detail |
| CX12g015621 | 12:22,575,602-22,578,061 | + | C1H12g05248 | C2H12g04489 | LOC_Os12g43100 | Os12g0626100 | - | Detail |
| CX12g016105 | 12:22,578,523-22,581,818 | - | C1H12g18708 | C2H12g15160 | LOC_Os12g43070 | - | - | Detail |
| CX12g015683 | 12:22,583,579-22,587,501 | + | C1H12g07880 | C2H12g27340 | LOC_Os12g43300 | Os12g0612625 | - | Detail |
| CX12g015346 | 12:22,588,079-22,588,366 | + | C1H12g22055 | C2H12g28418 | LOC_Os12g43300 | - | - | Detail |
| CX12g017695 | 12:22,612,207-22,612,958 | - | C1H12g11976 | C2H12g08225 | LOC_Os12g43340 | Os12g0628100 | - | Detail |
| CX12g016076 | 12:22,618,830-22,619,828 | + | C1H12g20248 | C2H12g26158 | LOC_Os12g43350 | Os12g0628300 | - | Detail |
| CX12g016525 | 12:22,622,993-22,623,538 | - | C1H12g26342 | - | - | - | - | Detail |
| CX12g016182 | 12:22,627,395-22,628,715 | + | C1H12g17443 | C2H12g10828 | LOC_Os12g43363 | Os12g0628400 | - | Detail |
| CX12g015409 | 12:22,630,144-22,633,097 | + | C1H12g27093 | C2H12g02542 | LOC_Os12g43370 | Os12g0628500 | - | Detail |
| CX12g015749 | 12:22,640,804-22,641,621 | + | C1H7g20360 | C2H7g10129 | LOC_Os12g38510 | - | - | Detail |
| CX12g016385 | 12:22,650,822-22,654,137 | - | C1H12g10720 | C2H12g29563 | LOC_Os12g43390 | Os12g0629300 | - | Detail |
| CX12g018785 | 12:22,702,510-22,702,719 | - | C1H1g14515 | C2H1g23792 | - | - | - | Detail |
| CX12g015757 | 12:22,704,693-22,705,911 | - | C1H12g31505 | C2H12g14169 | LOC_Os12g43500 | Os12g0278900 | - | Detail |
| CX12g016272 | 12:22,706,579-22,707,240 | + | C1H12g07071 | C2H12g17471 | LOC_Os12g43510 | Os12g0630600 | - | Detail |
| CX12g017936 | 12:22,708,273-22,708,470 | + | - | - | - | Os12g0568166 | - | Detail |
| CX12g015545 | 12:22,716,054-22,719,926 | - | C1H12g22486 | C2H12g09484 | LOC_Os12g43520 | Os12g0630700 | - | Detail |
| CX12g016310 | 12:22,722,484-22,724,492 | - | C1H12g11560 | C2H12g25329 | LOC_Os12g43530 | Os12g0630800 | - | Detail |