| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27418 | 1:17,413,631-17,420,934 | + | C2H1g21312 | CX1g005208 | LOC_Os08g09860 | - | - | Detail |
| C1H1g28314 | 1:17,443,733-17,444,303 | + | C2H1g17187 | CX1g003392 | LOC_Os01g33670 | Os01g0520500 | - | Detail |
| C1H1g02683 | 1:17,445,295-17,450,504 | - | C2H1g08242 | CX1g006219 | LOC_Os01g33684 | Os01g0520600 | - | Detail |
| C1H1g27816 | 1:17,476,223-17,477,466 | + | - | CX1g001522 | LOC_Os01g33762 | Os04g0228300 | - | Detail |
| C1H1g04217 | 1:17,498,928-17,506,747 | + | C2H1g00800 | CX1g002325 | LOC_Os01g33784 | Os01g0521400 | - | Detail |
| C1H1g30357 | 1:17,510,328-17,520,815 | + | C2H1g26145 | CX1g001131 | LOC_Os01g33800 | Os01g0521500 | - | Detail |
| C1H1g25202 | 1:17,537,078-17,538,135 | + | C2H1g21205 | CX1g005107 | LOC_Os01g33910 | Os01g0522100 | - | Detail |
| C1H1g08450 | 1:17,556,024-17,559,721 | + | C2H1g18568 | CX1g005107 | LOC_Os01g33930 | Os01g0522950 | - | Detail |
| C1H1g10941 | 1:17,562,380-17,563,337 | + | C2H1g11782 | CX1g006523 | LOC_Os01g33950 | Os01g0523100 | - | Detail |
| C1H1g21896 | 1:17,564,801-17,565,783 | + | C2H1g11782 | CX1g006523 | LOC_Os01g33950 | Os01g0523100 | - | Detail |
| C1H1g09014 | 1:17,573,170-17,581,097 | + | C2H1g13197 | CX1g005107 | LOC_Os01g34000 | Os01g0524100 | ESA1 | Detail |
| C1H1g03031 | 1:17,609,485-17,611,145 | + | C2H1g22021 | CX1g000293 | LOC_Os01g34060 | Os01g0863300 | - | Detail |
| C1H1g05337 | 1:17,624,574-17,635,162 | + | C2H1g01344 | CX1g003083 | LOC_Os01g34080 | Os01g0524700 | - | Detail |
| C1H1g08661 | 1:17,704,268-17,705,104 | + | C2H1g28979 | - | - | - | - | Detail |
| C1H1g01010 | 1:17,706,879-17,709,624 | + | C2H1g17057 | CX1g002923 | LOC_Os01g34190 | Os01g0526100 | - | Detail |
| C1H1g10979 | 1:17,710,839-17,714,130 | + | C2H1g19688 | CX1g003716 | LOC_Os01g34200 | Os01g0526200 | - | Detail |
| C1H1g28687 | 1:17,745,595-17,761,416 | + | C2H1g06550 | CX1g006793 | LOC_Os01g34330 | Os01g0527400 | - | Detail |
| C1H1g03628 | 1:17,762,560-17,767,791 | - | C2H1g06422 | CX1g000241 | LOC_Os01g34350 | Os01g0527600 | SHL2, shl2, SHL2, sh2, OsRDR6 | Detail |
| C1H1g18093 | 1:17,772,289-17,777,173 | - | C2H1g29503 | CX1g004192 | LOC_Os01g34390 | Os01g0527700 | - | Detail |
| C1H1g30321 | 1:17,779,715-17,791,385 | + | C2H1g02847 | CX1g007113 | LOC_Os01g34430 | Os01g0528000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g017685 | 12:22,067,627-22,070,161 | - | C1H12g13396 | C2H12g14277 | LOC_Os12g42140 | Os12g0615800 | - | Detail |
| CX12g018419 | 12:22,072,014-22,074,372 | + | C1H12g23697 | C2H12g05828 | LOC_Os12g42150 | Os12g0615900 | - | Detail |
| CX12g017773 | 12:22,075,316-22,079,990 | - | C1H12g23784 | C2H12g19654 | LOC_Os12g42160 | Os12g0616000 | - | Detail |
| CX12g018174 | 12:22,082,102-22,082,716 | - | C1H12g24997 | C2H12g20626 | LOC_Os12g42170 | - | - | Detail |
| CX12g017357 | 12:22,083,574-22,085,017 | - | C1H12g24509 | C2H12g14778 | LOC_Os12g42180 | Os12g0616200 | - | Detail |
| CX12g018766 | 12:22,094,649-22,095,539 | + | C1H12g24812 | C2H12g02043 | LOC_Os12g42190 | Os12g0616400 | OsPCF8, PCF8 | Detail |
| CX12g017815 | 12:22,112,803-22,119,174 | + | C1H12g09845 | C2H12g13575 | LOC_Os12g42200 | Os12g0616500 | - | Detail |
| CX12g016627 | 12:22,120,094-22,124,685 | + | C1H12g18036 | C2H12g18339 | LOC_Os12g42210 | Os12g0616600 | - | Detail |
| CX12g017462 | 12:22,133,482-22,134,285 | - | C1H12g28752 | C2H12g14540 | LOC_Os12g42220 | Os12g0616800 | - | Detail |
| CX12g016664 | 12:22,139,009-22,139,383 | + | - | - | - | - | - | Detail |
| CX12g015655 | 12:22,140,878-22,143,748 | + | C1H12g11680 | C2H12g22956 | LOC_Os12g42230 | Os12g0616900 | - | Detail |
| CX12g018652 | 12:22,149,885-22,150,496 | - | C1H12g16058 | C2H12g27369 | LOC_Os12g42250 | Os12g0617000 | PINE1, DEC1 | Detail |
| CX12g017918 | 12:22,160,642-22,165,812 | - | C1H12g09207 | C2H12g18617 | LOC_Os12g42260 | Os12g0617100 | - | Detail |
| CX12g015404 | 12:22,195,783-22,197,621 | + | C1H12g12970 | C2H12g17972 | LOC_Os12g42280 | Os12g0617400 | OsNCED5 | Detail |
| CX12g016440 | 12:22,202,707-22,202,883 | - | - | - | - | Os02g0188201 | - | Detail |
| CX12g018209 | 12:22,206,171-22,206,434 | + | - | - | - | - | - | Detail |
| CX12g016875 | 12:22,225,072-22,225,557 | + | - | - | - | - | - | Detail |
| CX12g018530 | 12:22,231,372-22,236,764 | - | C1H12g01907 | C2H12g07294 | LOC_Os12g42300 | Os12g0617800 | - | Detail |
| CX12g018388 | 12:22,238,311-22,246,227 | - | C1H12g22694 | C2H12g05116 | LOC_Os12g42310 | Os12g0617900 | - | Detail |
| CX12g018606 | 12:22,251,260-22,253,294 | + | C1H12g28509 | C2H12g08733 | LOC_Os12g42330 | Os12g0618000 | - | Detail |