| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22731 | 1:24,806,899-24,821,417 | - | C2H1g03816 | CX1g004904 | LOC_Os01g48680 | Os01g0678500 | TPC1, OsTPC1, Tpc1, OsCC1 | Detail |
| C1H1g06484 | 1:24,822,645-24,824,648 | + | C2H1g17432 | CX1g001832 | LOC_Os01g48690 | Os01g0678600 | - | Detail |
| C1H1g21202 | 1:24,825,534-24,828,516 | - | C2H1g29587 | CX1g005378 | LOC_Os01g48700 | Os01g0678700 | - | Detail |
| C1H1g29809 | 1:24,831,421-24,834,882 | + | C2H1g22453 | CX1g000800 | - | - | - | Detail |
| C1H1g09148 | 1:24,836,776-24,837,408 | - | C2H1g18621 | CX1g006182 | LOC_Os01g48710 | Os01g0678800 | - | Detail |
| C1H1g01369 | 1:24,845,874-24,854,466 | + | C2H1g02873 | CX1g006519 | LOC_Os01g48720 | Os01g0679000 | - | Detail |
| C1H1g15834 | 1:24,862,555-24,939,365 | - | C2H1g22016 | CX1g002522 | LOC_Os01g48830 | Os01g0680700 | - | Detail |
| C1H1g09308 | 1:24,863,371-24,867,936 | + | C2H1g10975 | CX1g004313 | LOC_Os01g48750 | Os01g0679550 | - | Detail |
| C1H1g00895 | 1:24,869,571-24,872,932 | + | C2H1g25010 | CX1g003619 | LOC_Os01g48760 | Os01g0679600 | - | Detail |
| C1H1g15404 | 1:24,886,940-24,893,719 | + | C2H1g01242 | CX1g003718 | LOC_Os01g48790 | Os01g0679900 | - | Detail |
| C1H1g14743 | 1:24,904,493-24,905,653 | + | C2H1g18628 | CX1g004327 | LOC_Os01g48800 | Os01g0680200 | OsPUP4, BG3/OsPUP4, BG3 | Detail |
| C1H1g08166 | 1:24,917,950-24,920,122 | + | C2H1g09841 | CX1g006918 | LOC_Os01g48810 | Os01g0680400 | - | Detail |
| C1H1g07424 | 1:24,925,640-24,926,551 | + | C2H1g14175 | CX1g002655 | LOC_Os01g48820 | Os01g0680600 | - | Detail |
| C1H1g07492 | 1:24,931,644-24,932,133 | + | - | - | - | Os01g0680650 | - | Detail |
| C1H1g17992 | 1:24,948,315-24,950,911 | - | C2H1g29263 | CX1g007143 | LOC_Os01g48850 | Os01g0680900 | - | Detail |
| C1H1g20689 | 1:24,952,547-24,958,250 | - | C2H1g05013 | CX1g002388 | LOC_Os01g48874 | Os01g0681000 | - | Detail |
| C1H1g14533 | 1:24,963,599-24,966,274 | + | C2H1g17133 | CX1g001461 | LOC_Os01g48900 | Os01g0681100 | - | Detail |
| C1H1g07251 | 1:24,966,702-24,969,016 | + | C2H1g07127 | CX1g001461 | LOC_Os01g48900 | Os05g0556100 | - | Detail |
| C1H1g21340 | 1:24,970,459-24,975,608 | - | C2H1g13127 | CX1g007055 | LOC_Os01g48910 | Os01g0681200 | - | Detail |
| C1H1g18369 | 1:24,978,777-24,984,105 | - | C2H1g29187 | CX1g000478 | LOC_Os01g48920 | Os01g0681400 | ATG6A, OsATG6a | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015834 | 12:21,881,211-21,884,624 | - | C1H12g18689 | C2H12g23350 | LOC_Os12g41890 | Os12g0613100 | - | Detail |
| CX12g015458 | 12:21,889,029-21,896,235 | - | C1H12g03545 | C2H12g07115 | LOC_Os12g41900 | Os12g0613200 | - | Detail |
| CX12g017712 | 12:21,898,498-21,902,694 | - | C1H12g27977 | C2H12g16250 | LOC_Os12g41910 | Os12g0613250 | - | Detail |
| CX12g017601 | 12:21,905,511-21,907,955 | - | C1H12g07619 | C2H12g14082 | LOC_Os12g41920 | Os12g0613300 | - | Detail |
| CX12g015124 | 12:21,911,697-21,914,523 | + | C1H12g09933 | C2H12g28184 | LOC_Os12g41930 | Os12g0613500 | - | Detail |
| CX12g017931 | 12:21,918,882-21,919,130 | + | - | - | - | - | - | Detail |
| CX12g017477 | 12:21,921,518-21,923,442 | + | C1H12g00573 | C2H12g06308 | LOC_Os12g41940 | Os12g0613600 | - | Detail |
| CX12g015895 | 12:21,924,578-21,929,372 | - | C1H12g26381 | C2H12g17629 | LOC_Os12g41950 | Os12g0613700 | - | Detail |
| CX12g017805 | 12:21,937,738-21,941,101 | + | C1H12g30792 | C2H12g16140 | LOC_Os12g41956 | Os12g0613850 | - | Detail |
| CX12g016006 | 12:21,945,094-21,945,833 | + | C1H12g18392 | C2H12g29571 | LOC_Os12g41962 | Os12g0614000 | - | Detail |
| CX12g015304 | 12:21,945,100-21,945,524 | - | - | - | - | Os12g0614050 | - | Detail |
| CX12g018662 | 12:21,993,173-21,994,633 | + | C1H12g19557 | C2H12g27495 | LOC_Os12g42020 | Os12g0614600 | OsPID | Detail |
| CX12g018590 | 12:22,015,183-22,018,054 | + | C1H12g00787 | C2H12g28277 | LOC_Os12g42040 | Os12g0614851 | - | Detail |
| CX12g015873 | 12:22,028,362-22,031,266 | + | C1H12g12175 | C2H12g11390 | LOC_Os12g42070 | Os12g0615000 | - | Detail |
| CX12g017642 | 12:22,033,033-22,035,755 | + | C1H12g08247 | C2H12g12105 | LOC_Os12g42060 | Os12g0615100 | - | Detail |
| CX12g017528 | 12:22,037,485-22,040,481 | + | C1H12g00787 | C2H12g16999 | LOC_Os12g42070 | Os12g0615300 | - | Detail |
| CX12g017746 | 12:22,044,364-22,046,416 | - | C1H12g10003 | C2H12g17332 | LOC_Os12g42090 | Os12g0615400 | - | Detail |
| CX12g016225 | 12:22,047,458-22,051,526 | - | C1H12g11001 | C2H12g09885 | LOC_Os12g42100 | Os12g0615500 | - | Detail |
| CX12g016193 | 12:22,060,550-22,062,739 | + | C1H12g04837 | C2H12g04217 | LOC_Os12g42120 | Os12g0615600 | - | Detail |
| CX12g016120 | 12:22,063,162-22,065,331 | + | C1H12g24790 | C2H12g25758 | LOC_Os12g42130 | Os12g0615700 | - | Detail |