| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g01599 | 9:14,273,618-14,273,881 | - | - | - | - | - | - | Detail |
| C2H9g28821 | 9:14,273,979-14,278,426 | + | C1H9g13901 | CX9g055414 | LOC_Os09g28050 | Os09g0453800 | - | Detail |
| C2H9g28225 | 9:14,283,783-14,285,326 | - | C1H9g00481 | CX9g057470 | LOC_Os09g28060 | Os09g0453900 | - | Detail |
| C2H9g17318 | 9:14,292,584-14,295,655 | + | C1H9g19719 | CX9g056919 | LOC_Os09g28100 | Os09g0454100 | - | Detail |
| C2H9g11334 | 9:14,295,835-14,300,896 | - | C1H9g10992 | CX9g057696 | LOC_Os09g28110 | Os09g0454200 | - | Detail |
| C2H9g24563 | 9:14,305,949-14,307,540 | + | C1H9g00491 | CX9g058006 | LOC_Os09g28120 | Os09g0454300 | - | Detail |
| C2H9g07945 | 9:14,310,076-14,311,661 | - | C1H9g26159 | CX9g056279 | LOC_Os09g28150 | Os09g0454500 | - | Detail |
| C2H9g22728 | 9:14,312,971-14,315,320 | + | C1H9g31005 | CX9g055863 | LOC_Os09g28160 | Os09g0454600 | - | Detail |
| C2H9g04822 | 9:14,335,591-14,336,866 | - | C1H9g16360 | CX9g056281 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| C2H9g30062 | 9:14,383,014-14,388,522 | + | C1H9g04635 | CX9g057536 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| C2H9g07506 | 9:14,390,837-14,394,842 | + | C1H9g15793 | CX9g057089 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| C2H9g21988 | 9:14,414,499-14,419,491 | + | C1H9g07328 | CX9g057315 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| C2H9g18507 | 9:14,433,406-14,436,934 | - | C1H9g05942 | CX9g057565 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| C2H9g21808 | 9:14,459,400-14,459,848 | + | C1H9g27020 | CX9g057558 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| C2H9g27523 | 9:14,460,171-14,461,352 | + | C1H9g07321 | CX9g056155 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| C2H9g05118 | 9:14,466,878-14,468,369 | + | C1H9g27020 | CX9g057558 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| C2H9g27891 | 9:14,479,362-14,480,889 | + | C1H9g19292 | CX9g056052 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| C2H9g22499 | 9:14,485,995-14,488,511 | + | C1H9g17506 | CX9g056678 | LOC_Os09g28450 | Os09g0458000 | - | Detail |
| C2H9g12022 | 9:14,489,725-14,490,123 | + | - | - | - | - | - | Detail |
| C2H9g09485 | 9:14,492,440-14,494,175 | - | C1H9g21504 | CX9g055800 | LOC_Os09g28460 | Os09g0458100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016797 | 12:21,712,621-21,713,160 | + | C1H12g11412 | C2H12g18848 | LOC_Os12g41640 | Os12g0610100 | - | Detail |
| CX12g016171 | 12:21,717,421-21,719,915 | + | C1H12g03466 | C2H12g22960 | LOC_Os12g41650 | Os12g0610200 | OsPIL11, OsbHLH102 | Detail |
| CX12g016406 | 12:21,731,373-21,732,488 | - | C1H12g24161 | C2H12g28172 | LOC_Os12g41660 | Os12g0610300 | - | Detail |
| CX12g018004 | 12:21,739,174-21,743,874 | + | C1H12g28659 | C2H12g13640 | LOC_Os12g41670 | Os12g0610500 | - | Detail |
| CX12g017995 | 12:21,747,483-21,747,779 | - | - | - | - | - | - | Detail |
| CX12g015188 | 12:21,749,670-21,754,900 | + | C1H12g22847 | C2H12g12256 | LOC_Os12g41680 | Os12g0610600 | OMTN3, ONAC60 | Detail |
| CX12g015931 | 12:21,756,756-21,758,114 | - | C1H12g08761 | C2H12g21799 | LOC_Os12g41690 | Os12g0610800 | - | Detail |
| CX12g017597 | 12:21,766,596-21,769,840 | - | C1H12g15132 | C2H12g20032 | LOC_Os12g41710 | Os12g0121100 | - | Detail |
| CX12g015642 | 12:21,774,456-21,778,153 | - | C1H12g26945 | C2H12g22290 | LOC_Os12g41715 | Os12g0611200 | - | Detail |
| CX12g016555 | 12:21,784,332-21,785,987 | - | C1H12g17196 | C2H12g06547 | LOC_Os12g41720 | Os12g0611300 | - | Detail |
| CX12g017804 | 12:21,803,523-21,803,717 | - | C1H12g13562 | C2H12g29304 | LOC_Os12g41760 | Os12g0611700 | - | Detail |
| CX12g016407 | 12:21,812,214-21,813,308 | + | C1H12g25780 | C2H12g07880 | LOC_Os12g41780 | Os12g0611900 | - | Detail |
| CX12g017674 | 12:21,816,687-21,819,256 | - | C1H12g30675 | C2H12g27565 | LOC_Os12g41800 | Os12g0612100 | - | Detail |
| CX12g015260 | 12:21,822,263-21,825,350 | - | C1H12g18919 | C2H12g13199 | LOC_Os12g41810 | Os12g0612300 | - | Detail |
| CX12g016874 | 12:21,830,413-21,835,043 | - | C1H12g01538 | C2H12g21257 | LOC_Os12g41820 | Os12g0612400 | - | Detail |
| CX12g016159 | 12:21,841,421-21,843,093 | - | C1H12g06582 | C2H12g13378 | LOC_Os12g41830 | Os12g0612500 | - | Detail |
| CX12g015068 | 12:21,845,549-21,851,145 | - | C1H12g30446 | C2H12g09801 | LOC_Os12g41860 | Os12g0612700 | HOX33, Oshox33, OsHox33, OSHB3, SIP22 | Detail |
| CX12g016033 | 12:21,853,441-21,853,602 | + | - | - | - | - | - | Detail |
| CX12g016296 | 12:21,871,022-21,873,082 | - | C1H12g15166 | C2H12g16409 | LOC_Os12g41880 | Os12g0613000 | OsNF-YA9, HAP2B | Detail |
| CX12g016833 | 12:21,879,302-21,880,694 | + | - | - | - | - | - | Detail |