| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g20716 | 3:26,449,419-26,455,721 | - | C2H3g29194 | CX3g026534 | LOC_Os03g49630 | Os03g0703300 | - | Detail |
| C1H3g05428 | 3:26,458,112-26,464,358 | - | C2H3g01101 | CX3g027729 | LOC_Os03g49640 | Os03g0703400 | OsCSL1, MKKK22 | Detail |
| C1H3g02932 | 3:26,471,210-26,471,830 | + | C2H3g22172 | CX3g031175 | - | Os03g0703600 | - | Detail |
| C1H3g27763 | 3:26,479,354-26,481,983 | + | C2H3g29973 | CX3g028108 | LOC_Os03g49700 | Os03g0703900 | - | Detail |
| C1H3g27362 | 3:26,483,366-26,484,792 | + | C2H3g13190 | CX3g026571 | LOC_Os03g49710 | Os03g0704000 | - | Detail |
| C1H3g23851 | 3:26,486,613-26,489,527 | + | C2H3g08604 | CX3g029652 | LOC_Os03g49720 | Os03g0704100 | - | Detail |
| C1H3g07852 | 3:26,490,214-26,493,452 | - | C2H3g29014 | CX3g027461 | LOC_Os03g49730 | Os03g0704200 | - | Detail |
| C1H3g06974 | 3:26,493,521-26,493,748 | - | C2H3g23956 | - | LOC_Os03g49730 | Os03g0704200 | - | Detail |
| C1H3g28557 | 3:26,494,249-26,499,170 | + | C2H3g16102 | CX3g029894 | LOC_Os03g49750 | Os03g0704400 | - | Detail |
| C1H3g03526 | 3:26,509,027-26,518,121 | + | C2H3g11078 | CX3g026920 | LOC_Os03g49770 | Os03g0704700 | ORP1C | Detail |
| C1H3g14731 | 3:26,531,849-26,536,412 | - | C2H3g28946 | CX3g030070 | LOC_Os03g49800 | Os03g0705300 | - | Detail |
| C1H3g17034 | 3:26,584,653-26,586,775 | + | C2H3g19805 | CX3g026164 | LOC_Os03g49830 | Os03g0705800 | - | Detail |
| C1H3g02900 | 3:26,641,456-26,648,704 | - | C2H3g09610 | CX3g028672 | LOC_Os03g49900 | Os03g0706900 | LE, TT3.1, DGS1 | Detail |
| C1H3g20914 | 3:26,657,222-26,659,547 | + | C2H3g07887 | CX3g028303 | LOC_Os03g49940 | Os03g0707200 | TT3.2 | Detail |
| C1H3g18351 | 3:26,661,178-26,669,551 | - | C2H3g17433 | CX3g029801 | LOC_Os03g49960 | Os03g0707300 | - | Detail |
| C1H3g18483 | 3:26,708,749-26,717,022 | - | C2H3g19955 | CX3g027756 | LOC_Os03g50010 | Os03g0707900 | - | Detail |
| C1H3g03460 | 3:26,721,806-26,723,504 | + | C2H3g30153 | CX3g025431 | LOC_Os03g50030 | Os03g0708000 | - | Detail |
| C1H3g17884 | 3:26,725,970-26,728,869 | - | C2H3g07785 | CX3g025623 | LOC_Os03g50040 | Os03g0708100 | - | Detail |
| C1H3g20236 | 3:26,735,509-26,739,257 | + | C2H3g01941 | CX3g030384 | LOC_Os03g50070 | Os03g0708400 | - | Detail |
| C1H3g01824 | 3:26,739,932-26,740,886 | - | C2H3g11988 | - | LOC_Os03g50080 | Os03g0708500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016797 | 12:21,712,621-21,713,160 | + | C1H12g11412 | C2H12g18848 | LOC_Os12g41640 | Os12g0610100 | - | Detail |
| CX12g016171 | 12:21,717,421-21,719,915 | + | C1H12g03466 | C2H12g22960 | LOC_Os12g41650 | Os12g0610200 | OsPIL11, OsbHLH102 | Detail |
| CX12g016406 | 12:21,731,373-21,732,488 | - | C1H12g24161 | C2H12g28172 | LOC_Os12g41660 | Os12g0610300 | - | Detail |
| CX12g018004 | 12:21,739,174-21,743,874 | + | C1H12g28659 | C2H12g13640 | LOC_Os12g41670 | Os12g0610500 | - | Detail |
| CX12g017995 | 12:21,747,483-21,747,779 | - | - | - | - | - | - | Detail |
| CX12g015188 | 12:21,749,670-21,754,900 | + | C1H12g22847 | C2H12g12256 | LOC_Os12g41680 | Os12g0610600 | OMTN3, ONAC60 | Detail |
| CX12g015931 | 12:21,756,756-21,758,114 | - | C1H12g08761 | C2H12g21799 | LOC_Os12g41690 | Os12g0610800 | - | Detail |
| CX12g017597 | 12:21,766,596-21,769,840 | - | C1H12g15132 | C2H12g20032 | LOC_Os12g41710 | Os12g0121100 | - | Detail |
| CX12g015642 | 12:21,774,456-21,778,153 | - | C1H12g26945 | C2H12g22290 | LOC_Os12g41715 | Os12g0611200 | - | Detail |
| CX12g016555 | 12:21,784,332-21,785,987 | - | C1H12g17196 | C2H12g06547 | LOC_Os12g41720 | Os12g0611300 | - | Detail |
| CX12g017804 | 12:21,803,523-21,803,717 | - | C1H12g13562 | C2H12g29304 | LOC_Os12g41760 | Os12g0611700 | - | Detail |
| CX12g016407 | 12:21,812,214-21,813,308 | + | C1H12g25780 | C2H12g07880 | LOC_Os12g41780 | Os12g0611900 | - | Detail |
| CX12g017674 | 12:21,816,687-21,819,256 | - | C1H12g30675 | C2H12g27565 | LOC_Os12g41800 | Os12g0612100 | - | Detail |
| CX12g015260 | 12:21,822,263-21,825,350 | - | C1H12g18919 | C2H12g13199 | LOC_Os12g41810 | Os12g0612300 | - | Detail |
| CX12g016874 | 12:21,830,413-21,835,043 | - | C1H12g01538 | C2H12g21257 | LOC_Os12g41820 | Os12g0612400 | - | Detail |
| CX12g016159 | 12:21,841,421-21,843,093 | - | C1H12g06582 | C2H12g13378 | LOC_Os12g41830 | Os12g0612500 | - | Detail |
| CX12g015068 | 12:21,845,549-21,851,145 | - | C1H12g30446 | C2H12g09801 | LOC_Os12g41860 | Os12g0612700 | HOX33, Oshox33, OsHox33, OSHB3, SIP22 | Detail |
| CX12g016033 | 12:21,853,441-21,853,602 | + | - | - | - | - | - | Detail |
| CX12g016296 | 12:21,871,022-21,873,082 | - | C1H12g15166 | C2H12g16409 | LOC_Os12g41880 | Os12g0613000 | OsNF-YA9, HAP2B | Detail |
| CX12g016833 | 12:21,879,302-21,880,694 | + | - | - | - | - | - | Detail |