| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g10870 | 5:2,764,057-2,769,694 | - | C1H5g01429 | CX5g037873 | LOC_Os05g06350 | Os05g0155601 | Imp a1b, Imp3 | Detail |
| C2H5g10571 | 5:2,772,256-2,777,648 | + | C1H5g05444 | CX5g036886 | LOC_Os05g06360 | Os05g0155700 | - | Detail |
| C2H5g29906 | 5:2,783,261-2,784,652 | + | C1H5g08048 | CX5g040299 | LOC_Os05g06380 | Os05g0155800 | - | Detail |
| C2H5g30592 | 5:2,792,434-2,793,738 | + | C1H5g08048 | CX5g040434 | LOC_Os05g06380 | Os05g0155800 | - | Detail |
| C2H5g22135 | 5:2,799,478-2,802,268 | + | C1H5g20577 | CX5g040720 | LOC_Os05g06420 | Os05g0156200 | - | Detail |
| C2H5g24185 | 5:2,804,420-2,807,812 | - | C1H5g09510 | CX5g039738 | LOC_Os05g06430 | Os05g0156300 | - | Detail |
| C2H5g26310 | 5:2,815,955-2,820,288 | + | C1H5g09608 | CX5g036765 | LOC_Os05g06440 | Os05g0156500 | - | Detail |
| C2H5g19277 | 5:2,820,449-2,825,519 | - | C1H5g14046 | CX5g037146 | LOC_Os05g06450 | Os05g0156600 | - | Detail |
| C2H5g05970 | 5:2,827,521-2,834,014 | - | C1H5g24964 | CX5g038153 | LOC_Os05g06460 | Os05g0156700 | OsLPD1 | Detail |
| C2H5g20269 | 5:2,838,758-2,850,343 | + | C1H5g24978 | CX5g038021 | LOC_Os05g06470 | Os05g0156800 | - | Detail |
| C2H5g09414 | 5:2,851,034-2,855,117 | - | C1H5g24292 | CX5g037368 | LOC_Os05g06480 | Os05g0156900 | Chalk5 | Detail |
| C2H5g11758 | 5:2,860,791-2,863,087 | - | C1H5g00102 | CX5g037609 | LOC_Os05g06500 | Os05g0157200 | - | Detail |
| C2H5g06394 | 5:2,864,710-2,868,737 | - | C1H5g31378 | CX5g036870 | LOC_Os05g06510 | Os05g0157300 | - | Detail |
| C2H5g00238 | 5:2,873,275-2,874,014 | + | C1H5g16317 | CX5g039713 | LOC_Os05g06650 | Os05g0158400 | - | Detail |
| C2H5g01907 | 5:2,874,310-2,876,762 | + | C1H5g16317 | CX5g039713 | LOC_Os05g06630 | Os05g0158200 | - | Detail |
| C2H5g29731 | 5:2,882,126-2,886,279 | + | C1H5g16317 | CX5g040970 | LOC_Os05g06540 | Os05g0157600 | - | Detail |
| C2H5g15119 | 5:2,938,106-2,941,501 | + | C1H5g16317 | CX5g038380 | LOC_Os05g06630 | Os05g0158200 | - | Detail |
| C2H5g22849 | 5:2,947,907-2,951,658 | + | C1H5g05673 | CX5g039850 | LOC_Os05g06650 | Os05g0158400 | - | Detail |
| C2H5g05727 | 5:2,952,931-2,957,012 | - | C1H5g28371 | CX5g037102 | LOC_Os05g06660 | Os05g0158500 | GS5, OsSCP26 | Detail |
| C2H5g19140 | 5:2,973,259-2,979,155 | + | C1H5g06427 | CX5g037159 | LOC_Os05g06670 | Os05g0158600 | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016614 | 12:21,578,517-21,579,038 | - | - | - | LOC_Os12g41370 | - | - | Detail |
| CX12g018443 | 12:21,581,185-21,586,675 | + | C1H12g09199 | C2H12g22210 | LOC_Os12g41380 | Os12g0606900 | OsOTS2 | Detail |
| CX12g018107 | 12:21,590,639-21,593,625 | + | C1H12g12545 | C2H12g18070 | LOC_Os12g41390 | Os12g0607000 | - | Detail |
| CX12g015133 | 12:21,597,184-21,600,414 | + | C1H12g00650 | C2H12g00161 | LOC_Os12g41400 | Os12g0607100 | - | Detail |
| CX12g016705 | 12:21,621,568-21,626,363 | + | C1H12g01168 | C2H12g11981 | LOC_Os12g41490 | Os12g0608500 | - | Detail |
| CX12g016010 | 12:21,634,416-21,635,825 | - | C1H12g04073 | C2H12g20850 | LOC_Os12g41450 | Os12g0607800 | - | Detail |
| CX12g015736 | 12:21,637,405-21,638,805 | - | C1H12g04073 | C2H12g03575 | LOC_Os12g41450 | Os12g0607800 | - | Detail |
| CX12g015804 | 12:21,650,575-21,651,972 | - | C1H12g04073 | C2H12g03575 | LOC_Os12g41450 | Os12g0607800 | - | Detail |
| CX12g015339 | 12:21,655,453-21,655,785 | - | C1H12g28192 | C2H12g21094 | - | - | - | Detail |
| CX12g016220 | 12:21,655,920-21,656,235 | - | - | C2H12g25798 | - | - | - | Detail |
| CX12g016306 | 12:21,660,367-21,662,451 | + | C1H12g00220 | C2H12g11981 | LOC_Os12g41490 | Os12g0608500 | - | Detail |
| CX12g018323 | 12:21,662,921-21,667,470 | - | C1H12g09484 | C2H12g30093 | LOC_Os12g41500 | Os12g0608600 | STR22, OsStr22 | Detail |
| CX12g015250 | 12:21,669,119-21,671,188 | - | C1H12g01168 | C2H12g09553 | LOC_Os12g41510 | Os12g0608700 | - | Detail |
| CX12g017920 | 12:21,674,219-21,676,272 | - | C1H12g03128 | C2H12g05385 | LOC_Os12g41530 | Os12g0608900 | - | Detail |
| CX12g018003 | 12:21,685,851-21,688,358 | + | C1H12g26922 | C2H12g16628 | LOC_Os12g41540 | Os12g0608900 | - | Detail |
| CX12g016823 | 12:21,690,162-21,692,096 | - | C1H12g11116 | C2H12g06875 | LOC_Os12g41590 | Os12g0609500 | OsHLT1 | Detail |
| CX12g016466 | 12:21,695,384-21,696,376 | - | C1H12g27342 | C2H12g04006 | LOC_Os12g41600 | Os12g0609600 | - | Detail |
| CX12g016007 | 12:21,700,180-21,700,548 | + | - | - | - | - | - | Detail |
| CX12g016254 | 12:21,701,472-21,706,772 | + | C1H12g18705 | C2H12g26465 | LOC_Os12g41620 | Os12g0609800 | - | Detail |
| CX12g017875 | 12:21,707,755-21,708,618 | - | C1H12g11038 | C2H12g18784 | LOC_Os12g41630 | Os12g0609900 | - | Detail |