| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g00346 | 6:24,404,316-24,405,485 | + | - | - | - | Os06g0675300 | - | Detail |
| C1H6g03218 | 6:24,421,355-24,425,049 | + | C2H6g16522 | CX6g042717 | LOC_Os06g46270 | Os06g0675600 | OsY37, ONAC011 | Detail |
| C1H6g05246 | 6:24,430,711-24,441,204 | - | C2H6g30405 | CX6g041293 | LOC_Os06g46340 | Os06g0676700 | - | Detail |
| C1H6g05961 | 6:24,442,175-24,449,152 | - | C2H6g20637 | CX6g043872 | LOC_Os06g46310 | Os06g0676000 | NRAMP3, OsNramp3, OsNRAMP3 | Detail |
| C1H6g12474 | 6:24,470,389-24,472,453 | - | C2H6g24034 | CX6g042075 | LOC_Os06g46330 | Os06g0676600 | - | Detail |
| C1H6g29534 | 6:24,480,900-24,485,329 | + | C2H6g04890 | CX6g041293 | LOC_Os06g46340 | Os06g0676700 | - | Detail |
| C1H6g30642 | 6:24,488,133-24,490,098 | - | C2H6g08388 | CX6g042639 | LOC_Os06g46350 | Os06g0677000 | DEP3, OspPLAIIIδ | Detail |
| C1H6g11720 | 6:24,513,318-24,517,704 | + | C2H6g24564 | CX6g043789 | LOC_Os06g46366 | Os06g0677300 | - | Detail |
| C1H6g31002 | 6:24,518,820-24,522,154 | + | C2H6g27620 | CX6g045150 | LOC_Os06g46372 | Os06g0677400 | - | Detail |
| C1H6g05901 | 6:24,523,528-24,527,946 | + | C2H6g16974 | CX6g042145 | LOC_Os06g46380 | Os06g0677500 | - | Detail |
| C1H6g18418 | 6:24,528,831-24,529,181 | - | C2H6g10162 | CX6g042294 | LOC_Os06g46390 | Os06g0677600 | - | Detail |
| C1H6g07635 | 6:24,530,929-24,535,986 | + | C2H6g18268 | CX6g042249 | LOC_Os06g46400 | Os06g0677700 | - | Detail |
| C1H6g07372 | 6:24,538,083-24,544,254 | - | C2H6g18312 | CX6g043778 | LOC_Os06g46410 | Os06g0677800 | OsARF17 | Detail |
| C1H6g28341 | 6:24,565,039-24,566,301 | + | C2H6g19101 | CX6g045136 | LOC_Os06g46440 | Os06g0678100 | - | Detail |
| C1H6g28764 | 6:24,566,533-24,571,907 | - | C2H6g22903 | CX6g043297 | LOC_Os06g46450 | Os06g0678200 | OsSPS1 | Detail |
| C1H6g19095 | 6:24,580,013-24,580,366 | + | - | CX6g045775 | LOC_Os06g46460 | Os06g0678500 | - | Detail |
| C1H6g09244 | 6:24,587,122-24,593,084 | - | C2H6g14411 | CX6g045884 | LOC_Os06g46475 | Os06g0678650 | - | Detail |
| C1H6g03373 | 6:24,595,611-24,605,419 | - | C2H6g03321 | CX6g045884 | LOC_Os02g06725 | - | - | Detail |
| C1H6g16196 | 6:24,606,247-24,612,389 | - | C2H6g12298 | - | LOC_Os06g46480 | Os06g0678700 | - | Detail |
| C1H6g30532 | 6:24,616,741-24,618,162 | - | C2H6g12298 | - | LOC_Os06g46480 | Os06g0678700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016455 | 12:20,876,954-20,877,184 | - | - | - | - | - | - | Detail |
| CX12g017037 | 12:20,878,042-20,878,248 | + | - | - | - | - | - | Detail |
| CX12g015622 | 12:20,882,571-20,885,067 | + | C1H12g21087 | C2H12g02968 | LOC_Os12g40590 | Os12g0597800 | - | Detail |
| CX12g017184 | 12:20,906,084-20,906,356 | - | - | - | - | - | - | Detail |
| CX12g015971 | 12:20,912,845-20,913,470 | + | - | - | - | - | - | Detail |
| CX12g015079 | 12:20,919,013-20,921,814 | + | C1H12g19125 | C2H12g17674 | LOC_Os12g40630 | Os12g0597800 | - | Detail |
| CX12g017725 | 12:20,929,464-20,929,769 | - | - | - | - | - | - | Detail |
| CX12g018730 | 12:20,949,590-20,953,034 | + | C1H12g31007 | C2H12g22715 | LOC_Os12g40710 | Os12g0599550 | - | Detail |
| CX12g017846 | 12:20,981,256-20,984,794 | + | C1H12g12997 | C2H12g04728 | LOC_Os12g40710 | Os12g0599550 | - | Detail |
| CX12g018779 | 12:21,005,218-21,008,892 | - | C1H12g18100 | C2H12g03764 | LOC_Os12g40730 | Os12g0599400 | - | Detail |
| CX12g015532 | 12:21,028,046-21,028,273 | - | - | - | - | Os12g0261250 | - | Detail |
| CX12g016730 | 12:21,042,333-21,042,536 | + | - | - | - | - | - | Detail |
| CX12g017545 | 12:21,042,972-21,044,585 | + | C1H12g15394 | C2H12g07593 | LOC_Os12g41040 | Os12g0603100 | SKL4-1 | Detail |
| CX12g018558 | 12:21,050,233-21,052,391 | + | C1H12g02851 | C2H12g23900 | LOC_Os12g40970 | - | - | Detail |
| CX12g018548 | 12:21,074,272-21,074,529 | - | C1H12g27138 | C2H12g08947 | LOC_Os12g40960 | Os12g0602450 | SKL1 | Detail |
| CX12g018400 | 12:21,104,843-21,107,179 | - | C1H12g22366 | C2H12g13167 | LOC_Os12g41060 | Os12g0603300 | - | Detail |
| CX12g017808 | 12:21,117,896-21,118,690 | + | C1H12g15394 | C2H12g01516 | LOC_Os12g41030 | Os12g0602966 | SKL2-1 | Detail |
| CX12g017663 | 12:21,123,397-21,123,906 | + | - | - | - | - | - | Detail |
| CX12g018464 | 12:21,138,405-21,138,995 | - | C1H12g13373 | C2H12g21970 | LOC_Os12g40750 | Os12g0599700 | OsPMEI48 | Detail |
| CX12g016404 | 12:21,139,965-21,140,585 | + | C1H12g08928 | C2H12g28497 | LOC_Os12g40760 | Os12g0599800 | OsPMEI49 | Detail |