| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g06427 | 5:2,991,615-2,997,443 | + | C2H5g19140 | CX5g037159 | LOC_Os05g06670 | Os05g0158600 | GA2OX1, OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1 | Detail |
| C1H5g15255 | 5:3,003,341-3,016,934 | + | C2H5g13429 | CX5g040180 | LOC_Os05g06690 | Os05g0159000 | - | Detail |
| C1H5g29215 | 5:3,020,866-3,023,528 | + | C2H5g10674 | CX5g036830 | LOC_Os05g06700 | Os05g0159100 | - | Detail |
| C1H5g24999 | 5:3,024,303-3,028,380 | - | C2H5g18018 | CX5g040661 | LOC_Os05g06710 | Os05g0159200 | - | Detail |
| C1H5g19191 | 5:3,030,462-3,037,921 | - | C2H5g19257 | CX5g037735 | LOC_Os05g06720 | Os05g0159300 | DARX1, GELP62 | Detail |
| C1H5g26427 | 5:3,057,170-3,060,791 | + | C2H5g24095 | CX5g036773 | LOC_Os05g06750 | Os05g0160000 | - | Detail |
| C1H5g22506 | 5:3,062,176-3,065,516 | + | C2H5g30095 | CX5g040221 | LOC_Os05g06760 | Os05g0160100 | - | Detail |
| C1H5g10936 | 5:3,070,796-3,071,813 | - | C2H5g06168 | CX5g038772 | LOC_Os05g06780 | Os05g0160300 | - | Detail |
| C1H5g01032 | 5:3,079,237-3,086,416 | + | C2H5g24726 | CX5g039426 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| C1H5g16939 | 5:3,114,826-3,119,380 | - | C2H5g04837 | CX5g039426 | LOC_Os05g06814 | Os05g0160600 | - | Detail |
| C1H5g08386 | 5:3,121,261-3,124,469 | - | C2H5g14563 | CX5g038917 | LOC_Os05g06814 | Os05g0161400 | - | Detail |
| C1H5g11456 | 5:3,134,137-3,138,736 | + | C2H5g12914 | CX5g036690 | LOC_Os05g06840 | Os05g0160800 | - | Detail |
| C1H5g17757 | 5:3,148,121-3,151,561 | + | C2H5g20736 | - | LOC_Os05g06890 | Os05g0161200 | OsCRSH1 | Detail |
| C1H5g28932 | 5:3,156,121-3,159,136 | + | C2H5g07576 | CX5g039426 | LOC_Os05g06910 | Os05g0161400 | - | Detail |
| C1H5g14109 | 5:3,169,114-3,169,720 | + | - | - | - | - | - | Detail |
| C1H5g24444 | 5:3,170,545-3,173,020 | + | C2H5g24440 | - | LOC_Os05g06920 | Os05g0161500 | OsCRSH2 | Detail |
| C1H5g10245 | 5:3,182,963-3,185,281 | + | C2H5g21538 | - | LOC_Os05g06940 | Os05g0161800 | OsCRSH3 | Detail |
| C1H5g04552 | 5:3,194,365-3,196,462 | - | C2H5g10505 | CX5g038822 | LOC_Os05g06970 | Os05g0162000 | - | Detail |
| C1H5g19592 | 5:3,201,093-3,211,946 | - | C2H5g18624 | CX5g040374 | LOC_Os05g06980 | Os05g0162200 | - | Detail |
| C1H5g00882 | 5:3,225,916-3,228,865 | - | C2H5g07564 | CX5g040436 | LOC_Os05g07000 | Os05g0162600 | OsRS2Z39 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004630 | 1:8,286,133-8,289,995 | - | C1H1g03305 | C2H1g26690 | LOC_Os01g16350 | Os01g0269000 | - | Detail |
| CX1g002921 | 1:8,292,655-8,296,324 | - | C1H1g03305 | C2H1g26690 | LOC_Os01g16354 | Os01g0269100 | - | Detail |
| CX1g007201 | 1:8,307,842-8,312,530 | - | C1H1g08644 | C2H1g13185 | LOC_Os01g16400 | Os01g0269800 | - | Detail |
| CX1g002088 | 1:8,330,780-8,330,941 | + | - | - | - | - | - | Detail |
| CX1g006664 | 1:8,331,876-8,332,206 | - | - | - | - | - | - | Detail |
| CX1g005887 | 1:8,337,297-8,337,474 | - | - | - | LOC_Os01g10030 | Os01g0196800 | - | Detail |
| CX1g003485 | 1:8,338,636-8,342,692 | + | C1H1g08644 | C2H1g13185 | LOC_Os01g16400 | Os01g0269800 | - | Detail |
| CX1g006578 | 1:8,344,013-8,346,301 | - | C1H1g18111 | C2H1g25069 | LOC_Os01g16414 | Os01g0269900 | OsARP6 | Detail |
| CX1g001230 | 1:8,370,471-8,374,374 | - | C1H1g03213 | C2H1g28351 | LOC_Os01g16430 | Os01g0270100 | - | Detail |
| CX1g002719 | 1:8,384,197-8,385,987 | + | C1H1g30414 | C2H1g10510 | LOC_Os01g16450 | Os01g0270300 | - | Detail |
| CX1g003971 | 1:8,393,555-8,395,042 | + | C1H1g20616 | C2H1g29197 | LOC_Os01g16470 | Os01g0270700 | - | Detail |
| CX1g005256 | 1:8,398,562-8,401,093 | + | C1H1g12376 | C2H1g23269 | LOC_Os01g16510 | Os01g0271000 | - | Detail |
| CX1g001075 | 1:8,401,696-8,404,887 | - | C1H1g15294 | C2H1g13171 | LOC_Os01g16520 | Os01g0271200 | OsGluRS | Detail |
| CX1g002800 | 1:8,406,928-8,410,920 | - | C1H1g14438 | C2H1g23197 | LOC_Os01g16530 | Os01g0271400 | - | Detail |
| CX1g005031 | 1:8,413,082-8,417,111 | + | C1H1g27124 | C2H1g08814 | LOC_Os01g16540 | Os01g0271500 | - | Detail |
| CX1g005496 | 1:8,423,953-8,426,217 | - | C1H1g12818 | C2H1g05634 | LOC_Os01g16550 | Os01g0271700 | - | Detail |
| CX1g001783 | 1:8,435,084-8,439,243 | + | C1H1g06668 | C2H1g22302 | LOC_Os01g16600 | Os01g0272600 | - | Detail |
| CX1g003184 | 1:8,440,429-8,441,218 | - | C1H1g17487 | C2H1g12551 | LOC_Os01g16610 | Os01g0272700 | - | Detail |
| CX1g000759 | 1:8,442,342-8,445,811 | - | C1H1g31877 | C2H1g01447 | LOC_Os01g16620 | Os01g0272800 | - | Detail |
| CX1g006610 | 1:8,449,076-8,449,489 | + | - | C2H1g15786 | LOC_Os01g18530 | Os01g0272901 | - | Detail |