| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g15691 | 2:18,518,729-18,530,008 | - | C2H2g20323 | CX2g022806 | LOC_Os02g32660 | Os02g0528200 | SBE3, SBEIII*, SBEIII, Sbe3, RBE3, QEIIa, QEIIA, BEIIb, BEIIB, SBEIIb, OsBEIIb, sbe3, SBE III | Detail |
| C1H2g29366 | 2:18,540,315-18,542,956 | - | C2H2g15285 | CX2g024606 | LOC_Os02g32690 | Os02g0318450 | - | Detail |
| C1H2g14806 | 2:18,546,359-18,556,471 | - | C2H2g15285 | CX2g020306 | LOC_Os02g32690 | Os02g0528900 | - | Detail |
| C1H2g11870 | 2:18,557,962-18,558,666 | - | C2H2g20296 | - | LOC_Os02g32700 | - | - | Detail |
| C1H2g12236 | 2:18,560,447-18,562,253 | - | - | - | - | - | - | Detail |
| C1H2g00920 | 2:18,571,975-18,576,501 | + | C2H2g10414 | CX2g022433 | LOC_Os02g32730 | Os02g0529400 | - | Detail |
| C1H2g24766 | 2:18,578,241-18,579,947 | + | C2H2g18145 | CX2g020157 | LOC_Os02g32740 | Os02g0529500 | - | Detail |
| C1H2g22581 | 2:18,590,623-18,592,115 | - | C2H2g17400 | CX2g023637 | LOC_Os02g32760 | Os02g0529700 | - | Detail |
| C1H2g07352 | 2:18,593,618-18,601,188 | - | C2H2g26264 | CX2g021706 | LOC_Os02g32770 | Os02g0529800 | - | Detail |
| C1H2g17686 | 2:18,610,094-18,611,375 | - | C2H2g27061 | CX2g021636 | LOC_Os02g32814 | Os02g0530100 | - | Detail |
| C1H2g06488 | 2:18,618,849-18,619,328 | + | C2H2g29992 | CX2g020180 | LOC_Os02g32840 | Os02g0530300 | OsSAP5 | Detail |
| C1H2g03635 | 2:18,636,340-18,636,609 | + | C2H2g28791 | CX2g021909 | LOC_Os02g32850 | Os02g0530500 | - | Detail |
| C1H2g17644 | 2:18,641,166-18,646,101 | - | C2H2g06644 | CX2g021102 | LOC_Os02g32860 | Os02g0530600 | - | Detail |
| C1H2g20262 | 2:18,652,232-18,659,840 | + | C2H2g13474 | CX2g023644 | LOC_Os02g32930 | Os02g0531200 | - | Detail |
| C1H2g17709 | 2:18,669,439-18,670,607 | - | C2H2g09518 | CX2g023678 | LOC_Os02g32950 | Os02g0531600 | RCN2 | Detail |
| C1H2g28902 | 2:18,685,577-18,690,879 | + | C2H2g15698 | CX2g019431 | LOC_Os02g32970 | Os04g0411800 | - | Detail |
| C1H2g22832 | 2:18,714,021-18,717,719 | + | C2H2g22707 | CX2g023689 | LOC_Os02g33000 | Os02g0532900 | - | Detail |
| C1H2g16813 | 2:18,717,827-18,723,569 | - | C2H2g18655 | CX2g019017 | LOC_Os02g33010 | Os02g0533000 | - | Detail |
| C1H2g00080 | 2:18,727,159-18,729,594 | + | C2H2g19682 | CX2g024724 | LOC_Os02g33020 | Os02g0533200 | - | Detail |
| C1H2g31211 | 2:18,730,871-18,733,216 | + | C2H2g19682 | CX2g023010 | LOC_Os02g33030 | Os02g0533300 | OsalphaCA1, OsαCA1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g004630 | 1:8,286,133-8,289,995 | - | C1H1g03305 | C2H1g26690 | LOC_Os01g16350 | Os01g0269000 | - | Detail |
| CX1g002921 | 1:8,292,655-8,296,324 | - | C1H1g03305 | C2H1g26690 | LOC_Os01g16354 | Os01g0269100 | - | Detail |
| CX1g007201 | 1:8,307,842-8,312,530 | - | C1H1g08644 | C2H1g13185 | LOC_Os01g16400 | Os01g0269800 | - | Detail |
| CX1g002088 | 1:8,330,780-8,330,941 | + | - | - | - | - | - | Detail |
| CX1g006664 | 1:8,331,876-8,332,206 | - | - | - | - | - | - | Detail |
| CX1g005887 | 1:8,337,297-8,337,474 | - | - | - | LOC_Os01g10030 | Os01g0196800 | - | Detail |
| CX1g003485 | 1:8,338,636-8,342,692 | + | C1H1g08644 | C2H1g13185 | LOC_Os01g16400 | Os01g0269800 | - | Detail |
| CX1g006578 | 1:8,344,013-8,346,301 | - | C1H1g18111 | C2H1g25069 | LOC_Os01g16414 | Os01g0269900 | OsARP6 | Detail |
| CX1g001230 | 1:8,370,471-8,374,374 | - | C1H1g03213 | C2H1g28351 | LOC_Os01g16430 | Os01g0270100 | - | Detail |
| CX1g002719 | 1:8,384,197-8,385,987 | + | C1H1g30414 | C2H1g10510 | LOC_Os01g16450 | Os01g0270300 | - | Detail |
| CX1g003971 | 1:8,393,555-8,395,042 | + | C1H1g20616 | C2H1g29197 | LOC_Os01g16470 | Os01g0270700 | - | Detail |
| CX1g005256 | 1:8,398,562-8,401,093 | + | C1H1g12376 | C2H1g23269 | LOC_Os01g16510 | Os01g0271000 | - | Detail |
| CX1g001075 | 1:8,401,696-8,404,887 | - | C1H1g15294 | C2H1g13171 | LOC_Os01g16520 | Os01g0271200 | OsGluRS | Detail |
| CX1g002800 | 1:8,406,928-8,410,920 | - | C1H1g14438 | C2H1g23197 | LOC_Os01g16530 | Os01g0271400 | - | Detail |
| CX1g005031 | 1:8,413,082-8,417,111 | + | C1H1g27124 | C2H1g08814 | LOC_Os01g16540 | Os01g0271500 | - | Detail |
| CX1g005496 | 1:8,423,953-8,426,217 | - | C1H1g12818 | C2H1g05634 | LOC_Os01g16550 | Os01g0271700 | - | Detail |
| CX1g001783 | 1:8,435,084-8,439,243 | + | C1H1g06668 | C2H1g22302 | LOC_Os01g16600 | Os01g0272600 | - | Detail |
| CX1g003184 | 1:8,440,429-8,441,218 | - | C1H1g17487 | C2H1g12551 | LOC_Os01g16610 | Os01g0272700 | - | Detail |
| CX1g000759 | 1:8,442,342-8,445,811 | - | C1H1g31877 | C2H1g01447 | LOC_Os01g16620 | Os01g0272800 | - | Detail |
| CX1g006610 | 1:8,449,076-8,449,489 | + | - | C2H1g15786 | LOC_Os01g18530 | Os01g0272901 | - | Detail |