| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g14207 | 3:133,794-134,079 | - | - | CX3g030057 | - | Os03g0102000 | - | Detail |
| C2H3g00981 | 3:133,870-138,264 | + | C1H3g25020 | CX3g027602 | LOC_Os03g01230 | Os03g0102200 | - | Detail |
| C2H3g16038 | 3:142,600-153,389 | + | C1H3g05989 | CX3g029938 | LOC_Os03g01240 | Os03g0102300 | - | Detail |
| C2H3g07325 | 3:155,037-159,615 | + | C1H3g05608 | CX3g029938 | LOC_Os03g01240 | Os03g0102366 | - | Detail |
| C2H3g23495 | 3:159,429-164,729 | - | C1H3g25301 | CX3g027923 | LOC_Os03g01250 | Os03g0102400 | - | Detail |
| C2H3g09146 | 3:168,302-169,141 | - | C1H3g20737 | CX3g028399 | LOC_Os03g01260 | Os03g0102500 | - | Detail |
| C2H3g19463 | 3:174,039-175,541 | + | C1H3g18000 | CX3g030913 | LOC_Os03g01270 | Os03g0102700 | OsEXPB7 | Detail |
| C2H3g08091 | 3:184,712-188,564 | + | C1H3g03491 | CX3g027138 | LOC_Os03g01290 | Os03g0103000 | - | Detail |
| C2H3g23946 | 3:189,670-191,920 | + | - | - | - | - | - | Detail |
| C2H3g24645 | 3:196,980-197,405 | + | C1H3g01568 | CX3g025864 | LOC_Os03g01300 | Os03g0103100 | - | Detail |
| C2H3g00230 | 3:199,926-200,357 | + | C1H3g01568 | CX3g025864 | LOC_Os03g01300 | Os03g0103200 | - | Detail |
| C2H3g27129 | 3:208,983-209,564 | + | C1H3g18184 | CX3g025864 | LOC_Os03g01320 | Os03g0103300 | qLTG-3-1(t), qLTG-3-1(t), qLTG3-1, OsHyPRP05, OsHyPRP5, HyP/GRP05, HyP/GRP5 | Detail |
| C2H3g00666 | 3:218,224-219,759 | + | C1H3g24558 | CX3g025803 | - | Os03g0103400 | - | Detail |
| C2H3g07381 | 3:229,277-231,060 | + | C1H3g28077 | CX3g025211 | LOC_Os03g01530 | Os03g0105600 | - | Detail |
| C2H3g12984 | 3:233,719-235,979 | - | C1H3g23454 | CX3g026334 | LOC_Os03g01540 | Os03g0105700 | OsAHL6 | Detail |
| C2H3g00326 | 3:237,525-241,430 | - | C1H3g02722 | CX3g030126 | LOC_Os03g01550 | Os03g0105800 | - | Detail |
| C2H3g00355 | 3:244,970-247,830 | - | C1H3g03839 | CX3g030694 | LOC_Os03g01570 | Os03g0106000 | - | Detail |
| C2H3g00823 | 3:249,623-254,908 | - | C1H3g18280 | CX3g029689 | LOC_Os03g01580 | Os03g0106200 | - | Detail |
| C2H3g10053 | 3:258,131-262,210 | - | C1H3g03593 | CX3g031070 | LOC_Os03g01590 | Os03g0106300 | PAIR1, Pair1 | Detail |
| C2H3g14376 | 3:262,800-267,287 | - | C1H3g13137 | CX3g025678 | LOC_Os03g01600 | Os03g0106400 | OsBCAT1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018589 | 12:20,579,215-20,579,370 | - | - | - | - | - | - | Detail |
| CX12g018307 | 12:20,585,506-20,585,915 | + | C1H12g12178 | C2H12g28851 | LOC_Os12g40115 | Os12g0592200 | - | Detail |
| CX12g016300 | 12:20,588,136-20,588,303 | + | - | - | - | - | - | Detail |
| CX12g018221 | 12:20,588,635-20,590,621 | - | C1H12g20575 | C2H12g02463 | LOC_Os12g40120 | Os12g0592300 | - | Detail |
| CX12g018529 | 12:20,591,757-20,593,142 | + | C1H12g10967 | C2H12g08205 | LOC_Os12g40130 | Os12g0592400 | - | Detail |
| CX12g016602 | 12:20,593,806-20,595,209 | + | C1H12g11827 | C2H12g17008 | LOC_Os12g40140 | Os12g0592500 | - | Detail |
| CX12g017689 | 12:20,610,339-20,610,515 | - | - | - | - | - | - | Detail |
| CX12g018675 | 12:20,621,142-20,621,432 | + | C1H12g19402 | C2H12g03819 | LOC_Os12g40180 | Os12g0592900 | - | Detail |
| CX12g018708 | 12:20,622,058-20,626,553 | - | C1H12g09301 | C2H12g06295 | LOC_Os12g40190 | Os12g0593000 | OsXLG4 | Detail |
| CX12g017756 | 12:20,643,825-20,644,010 | + | - | - | - | - | - | Detail |
| CX12g016586 | 12:20,649,860-20,651,890 | - | C1H12g31727 | C2H12g22268 | LOC_Os12g40200 | Os12g0593300 | - | Detail |
| CX12g018287 | 12:20,682,329-20,682,748 | + | C1H12g03149 | C2H12g24657 | LOC_Os12g40270 | - | - | Detail |
| CX12g016173 | 12:20,686,184-20,686,510 | - | C1H12g28192 | C2H12g14953 | LOC_Os12g44280 | - | - | Detail |
| CX12g017924 | 12:20,695,983-20,714,728 | + | C1H12g19749 | C2H12g07230 | LOC_Os12g40279 | Os12g0594200 | - | Detail |
| CX12g017677 | 12:20,718,520-20,722,780 | + | C1H12g10580 | C2H12g07769 | LOC_Os12g41260 | Os12g0594300 | - | Detail |
| CX12g015706 | 12:20,726,375-20,727,700 | + | C1H12g11827 | C2H12g30647 | LOC_Os12g40290 | Os12g0592500 | - | Detail |
| CX12g017053 | 12:20,729,896-20,732,781 | + | C1H12g24949 | C2H12g26227 | LOC_Os12g40300 | Os12g0594600 | - | Detail |
| CX12g017358 | 12:20,733,730-20,735,938 | + | C1H12g08721 | C2H12g17691 | LOC_Os12g40310 | Os12g0594700 | - | Detail |
| CX12g015242 | 12:20,736,550-20,739,353 | + | C1H12g08721 | C2H12g17691 | LOC_Os12g40320 | Os12g0594700 | - | Detail |
| CX12g016461 | 12:20,741,840-20,742,148 | + | C1H12g18684 | C2H12g00050 | LOC_Os12g40330 | Os12g0594950 | - | Detail |