| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g13150 | 1:19,719,183-19,724,304 | - | C2H1g07054 | CX1g004353 | LOC_Os01g39134 | Os01g0572700 | - | Detail |
| C1H1g28155 | 1:19,742,455-19,742,760 | - | C2H1g05454 | CX1g006911 | LOC_Os01g56450 | Os01g0572966 | - | Detail |
| C1H1g07908 | 1:19,752,564-19,757,343 | + | C2H1g24859 | CX1g004042 | LOC_Os01g39250 | Os01g0574400 | - | Detail |
| C1H1g29752 | 1:19,758,224-19,764,239 | + | C2H1g10171 | CX1g004042 | LOC_Os01g39260 | Os01g0574500 | - | Detail |
| C1H1g31440 | 1:19,764,424-19,766,997 | - | C2H1g01556 | CX1g006116 | LOC_Os01g39270 | Os01g0574600 | OsGR2, GLYR2 | Detail |
| C1H1g24447 | 1:19,774,505-19,775,401 | - | C2H1g15345 | - | LOC_Os01g39290 | Os01g0574800 | - | Detail |
| C1H1g25426 | 1:19,804,916-19,813,361 | + | C2H1g03847 | CX1g005853 | LOC_Os01g39310 | Os01g0575000 | - | Detail |
| C1H1g10200 | 1:19,824,319-19,828,019 | + | C2H1g02368 | CX1g007231 | LOC_Os01g39330 | Os01g0575200 | OsbHLH024 | Detail |
| C1H1g31451 | 1:19,845,647-19,862,874 | - | C2H1g09392 | CX1g002175 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| C1H1g30977 | 1:19,904,946-19,907,110 | + | C2H1g15351 | - | LOC_Os01g39430 | Os01g0576100 | Rb1 | Detail |
| C1H1g22058 | 1:19,919,583-19,923,825 | + | C2H1g23511 | CX1g004267 | LOC_Os01g39580 | Os01g0575701 | - | Detail |
| C1H1g30169 | 1:20,001,847-20,002,962 | + | C2H1g23392 | CX1g004267 | LOC_Os01g39480 | Os01g0575701 | - | Detail |
| C1H1g25385 | 1:20,016,397-20,019,710 | - | C2H1g00498 | CX1g005578 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| C1H1g03498 | 1:20,034,003-20,038,602 | - | C2H1g04424 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C1H1g20612 | 1:20,043,128-20,049,701 | - | C2H1g11258 | CX1g003861 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| C1H1g26503 | 1:20,059,781-20,060,829 | + | C2H1g04472 | CX1g000177 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| C1H1g02081 | 1:20,062,715-20,064,890 | + | C2H1g18851 | - | LOC_Os01g39680 | Os01g0578700 | SAM, SaM+, SaM | Detail |
| C1H1g21250 | 1:20,113,505-20,116,419 | + | C2H1g09591 | CX1g005488 | LOC_Os01g39770 | Os01g0579600 | OsCBL9 | Detail |
| C1H1g07602 | 1:20,121,740-20,124,076 | + | C2H1g01010 | CX1g003267 | LOC_Os01g39780 | Os01g0579800 | - | Detail |
| C1H1g16386 | 1:20,124,940-20,128,086 | - | C2H1g23706 | CX1g002908 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018589 | 12:20,579,215-20,579,370 | - | - | - | - | - | - | Detail |
| CX12g018307 | 12:20,585,506-20,585,915 | + | C1H12g12178 | C2H12g28851 | LOC_Os12g40115 | Os12g0592200 | - | Detail |
| CX12g016300 | 12:20,588,136-20,588,303 | + | - | - | - | - | - | Detail |
| CX12g018221 | 12:20,588,635-20,590,621 | - | C1H12g20575 | C2H12g02463 | LOC_Os12g40120 | Os12g0592300 | - | Detail |
| CX12g018529 | 12:20,591,757-20,593,142 | + | C1H12g10967 | C2H12g08205 | LOC_Os12g40130 | Os12g0592400 | - | Detail |
| CX12g016602 | 12:20,593,806-20,595,209 | + | C1H12g11827 | C2H12g17008 | LOC_Os12g40140 | Os12g0592500 | - | Detail |
| CX12g017689 | 12:20,610,339-20,610,515 | - | - | - | - | - | - | Detail |
| CX12g018675 | 12:20,621,142-20,621,432 | + | C1H12g19402 | C2H12g03819 | LOC_Os12g40180 | Os12g0592900 | - | Detail |
| CX12g018708 | 12:20,622,058-20,626,553 | - | C1H12g09301 | C2H12g06295 | LOC_Os12g40190 | Os12g0593000 | OsXLG4 | Detail |
| CX12g017756 | 12:20,643,825-20,644,010 | + | - | - | - | - | - | Detail |
| CX12g016586 | 12:20,649,860-20,651,890 | - | C1H12g31727 | C2H12g22268 | LOC_Os12g40200 | Os12g0593300 | - | Detail |
| CX12g018287 | 12:20,682,329-20,682,748 | + | C1H12g03149 | C2H12g24657 | LOC_Os12g40270 | - | - | Detail |
| CX12g016173 | 12:20,686,184-20,686,510 | - | C1H12g28192 | C2H12g14953 | LOC_Os12g44280 | - | - | Detail |
| CX12g017924 | 12:20,695,983-20,714,728 | + | C1H12g19749 | C2H12g07230 | LOC_Os12g40279 | Os12g0594200 | - | Detail |
| CX12g017677 | 12:20,718,520-20,722,780 | + | C1H12g10580 | C2H12g07769 | LOC_Os12g41260 | Os12g0594300 | - | Detail |
| CX12g015706 | 12:20,726,375-20,727,700 | + | C1H12g11827 | C2H12g30647 | LOC_Os12g40290 | Os12g0592500 | - | Detail |
| CX12g017053 | 12:20,729,896-20,732,781 | + | C1H12g24949 | C2H12g26227 | LOC_Os12g40300 | Os12g0594600 | - | Detail |
| CX12g017358 | 12:20,733,730-20,735,938 | + | C1H12g08721 | C2H12g17691 | LOC_Os12g40310 | Os12g0594700 | - | Detail |
| CX12g015242 | 12:20,736,550-20,739,353 | + | C1H12g08721 | C2H12g17691 | LOC_Os12g40320 | Os12g0594700 | - | Detail |
| CX12g016461 | 12:20,741,840-20,742,148 | + | C1H12g18684 | C2H12g00050 | LOC_Os12g40330 | Os12g0594950 | - | Detail |