| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g31003 | 1:30,862,727-30,864,175 | + | C2H1g17151 | CX1g004658 | LOC_Os01g59990 | Os01g0815800 | - | Detail |
| C1H1g02777 | 1:30,865,159-30,868,765 | - | C2H1g11561 | CX1g001519 | LOC_Os01g60000 | Os01g0815900 | - | Detail |
| C1H1g09791 | 1:30,869,157-30,870,725 | + | C2H1g13748 | CX1g001573 | LOC_Os01g60010 | Os01g0816000 | - | Detail |
| C1H1g00772 | 1:30,872,324-30,873,477 | - | C2H1g09624 | CX1g005248 | LOC_Os01g60020 | Os01g0816100 | OsNAC4 | Detail |
| C1H1g28423 | 1:30,876,795-30,877,082 | + | - | - | - | - | - | Detail |
| C1H1g15712 | 1:30,885,496-30,901,935 | - | C2H1g09286 | CX1g002744 | LOC_Os01g60040 | Os01g0816400 | - | Detail |
| C1H1g15897 | 1:30,910,322-30,914,693 | - | C2H1g26961 | CX1g002744 | LOC_Os01g60050 | Os01g0816500 | - | Detail |
| C1H1g04794 | 1:30,917,388-30,922,442 | + | C2H1g04146 | CX1g001742 | LOC_Os01g60060 | Os01g0816600 | - | Detail |
| C1H1g24642 | 1:30,925,590-30,927,056 | + | C2H1g24791 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C1H1g24879 | 1:30,927,149-30,927,451 | + | C2H1g25178 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C1H1g23182 | 1:30,932,403-30,935,578 | - | C2H1g12383 | CX1g001408 | LOC_Os01g60110 | Os01g0817000 | - | Detail |
| C1H1g20937 | 1:30,938,410-30,941,850 | - | C2H1g27536 | CX1g001908 | LOC_Os01g60120 | Os01g0817100 | - | Detail |
| C1H1g16273 | 1:30,946,537-30,949,653 | + | C2H1g05301 | CX1g005873 | LOC_Os01g60140 | Os01g0817400 | - | Detail |
| C1H1g27130 | 1:30,950,380-30,950,676 | + | - | CX1g006550 | - | - | - | Detail |
| C1H1g15906 | 1:30,951,096-30,951,678 | - | C2H1g04044 | CX1g004355 | - | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C1H1g18287 | 1:30,959,654-30,960,304 | + | C2H1g27953 | CX1g005753 | LOC_Os01g60170 | Os01g0817650 | - | Detail |
| C1H1g14583 | 1:30,963,679-30,967,446 | + | C2H1g17170 | CX1g000357 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| C1H1g28961 | 1:30,967,898-30,971,189 | - | C2H1g22450 | CX1g003723 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| C1H1g28985 | 1:30,983,428-30,987,645 | + | C2H1g03576 | CX1g005948 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| C1H1g10378 | 1:30,991,363-30,992,829 | + | C2H1g16399 | CX1g005236 | - | Os01g0818100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g018589 | 12:20,579,215-20,579,370 | - | - | - | - | - | - | Detail |
| CX12g018307 | 12:20,585,506-20,585,915 | + | C1H12g12178 | C2H12g28851 | LOC_Os12g40115 | Os12g0592200 | - | Detail |
| CX12g016300 | 12:20,588,136-20,588,303 | + | - | - | - | - | - | Detail |
| CX12g018221 | 12:20,588,635-20,590,621 | - | C1H12g20575 | C2H12g02463 | LOC_Os12g40120 | Os12g0592300 | - | Detail |
| CX12g018529 | 12:20,591,757-20,593,142 | + | C1H12g10967 | C2H12g08205 | LOC_Os12g40130 | Os12g0592400 | - | Detail |
| CX12g016602 | 12:20,593,806-20,595,209 | + | C1H12g11827 | C2H12g17008 | LOC_Os12g40140 | Os12g0592500 | - | Detail |
| CX12g017689 | 12:20,610,339-20,610,515 | - | - | - | - | - | - | Detail |
| CX12g018675 | 12:20,621,142-20,621,432 | + | C1H12g19402 | C2H12g03819 | LOC_Os12g40180 | Os12g0592900 | - | Detail |
| CX12g018708 | 12:20,622,058-20,626,553 | - | C1H12g09301 | C2H12g06295 | LOC_Os12g40190 | Os12g0593000 | OsXLG4 | Detail |
| CX12g017756 | 12:20,643,825-20,644,010 | + | - | - | - | - | - | Detail |
| CX12g016586 | 12:20,649,860-20,651,890 | - | C1H12g31727 | C2H12g22268 | LOC_Os12g40200 | Os12g0593300 | - | Detail |
| CX12g018287 | 12:20,682,329-20,682,748 | + | C1H12g03149 | C2H12g24657 | LOC_Os12g40270 | - | - | Detail |
| CX12g016173 | 12:20,686,184-20,686,510 | - | C1H12g28192 | C2H12g14953 | LOC_Os12g44280 | - | - | Detail |
| CX12g017924 | 12:20,695,983-20,714,728 | + | C1H12g19749 | C2H12g07230 | LOC_Os12g40279 | Os12g0594200 | - | Detail |
| CX12g017677 | 12:20,718,520-20,722,780 | + | C1H12g10580 | C2H12g07769 | LOC_Os12g41260 | Os12g0594300 | - | Detail |
| CX12g015706 | 12:20,726,375-20,727,700 | + | C1H12g11827 | C2H12g30647 | LOC_Os12g40290 | Os12g0592500 | - | Detail |
| CX12g017053 | 12:20,729,896-20,732,781 | + | C1H12g24949 | C2H12g26227 | LOC_Os12g40300 | Os12g0594600 | - | Detail |
| CX12g017358 | 12:20,733,730-20,735,938 | + | C1H12g08721 | C2H12g17691 | LOC_Os12g40310 | Os12g0594700 | - | Detail |
| CX12g015242 | 12:20,736,550-20,739,353 | + | C1H12g08721 | C2H12g17691 | LOC_Os12g40320 | Os12g0594700 | - | Detail |
| CX12g016461 | 12:20,741,840-20,742,148 | + | C1H12g18684 | C2H12g00050 | LOC_Os12g40330 | Os12g0594950 | - | Detail |