| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g02722 | 12:9,934,713-9,938,479 | + | C1H12g10428 | - | LOC_Os12g20410 | Os12g0299700 | OsMAB | Detail |
| C2H12g11495 | 12:9,939,578-9,940,898 | + | C1H12g25886 | CX12g017151 | LOC_Os12g20410 | Os12g0299700 | OsMAB | Detail |
| C2H12g17974 | 12:10,071,367-10,072,172 | - | C1H12g01151 | CX12g015803 | LOC_Os02g24780 | - | - | Detail |
| C2H12g00861 | 12:10,213,477-10,219,191 | + | C1H12g04555 | CX12g018476 | LOC_Os11g41400 | Os12g0625200 | - | Detail |
| C2H12g05614 | 12:10,346,669-10,352,383 | + | C1H12g21600 | CX12g016544 | LOC_Os11g41400 | Os12g0625200 | - | Detail |
| C2H12g02367 | 12:10,419,604-10,430,698 | + | C1H12g29221 | CX12g015822 | LOC_Os12g21500 | Os12g0403800 | - | Detail |
| C2H12g18879 | 12:10,692,633-10,699,778 | + | C1H12g09047 | CX12g016009 | LOC_Os12g21700 | Os12g0405100 | - | Detail |
| C2H12g13525 | 12:10,701,284-10,704,543 | + | C1H12g11227 | CX12g015064 | LOC_Os12g21710 | Os12g0405200 | T20, HTD12 | Detail |
| C2H12g28725 | 12:10,727,451-10,731,836 | + | C1H12g24672 | - | - | Os12g0405700 | - | Detail |
| C2H12g11042 | 12:10,740,335-10,743,189 | - | C1H12g12079 | CX12g017894 | LOC_Os12g21789 | Os12g0406100 | - | Detail |
| C2H12g07596 | 12:10,746,201-10,749,659 | - | C1H12g19301 | CX3g025427 | LOC_Os12g21798 | Os12g0406200 | - | Detail |
| C2H12g04795 | 12:10,751,725-10,752,356 | - | C1H12g26931 | - | LOC_Os12g21810 | Os12g0406333 | - | Detail |
| C2H12g20448 | 12:10,781,126-10,781,869 | - | C1H12g00416 | CX12g017259 | LOC_Os12g21820 | Os12g0406333 | - | Detail |
| C2H12g16576 | 12:10,813,683-10,815,880 | - | C1H12g01344 | CX12g015535 | LOC_Os12g21890 | Os12g0407200 | - | Detail |
| C2H12g17465 | 12:10,816,896-10,819,007 | - | C1H12g03871 | CX12g015077 | LOC_Os12g21870 | Os12g0407300 | - | Detail |
| C2H12g12292 | 12:10,822,851-10,823,561 | + | C1H12g08395 | - | - | - | - | Detail |
| C2H12g22133 | 12:10,825,069-10,833,514 | - | C1H12g14937 | CX12g015535 | LOC_Os12g21890 | Os12g0407500 | - | Detail |
| C2H12g07548 | 12:10,846,027-10,847,406 | + | C1H12g00949 | CX12g016372 | LOC_Os12g21930 | Os12g0407900 | - | Detail |
| C2H12g12037 | 12:10,853,258-10,855,501 | - | C1H12g19547 | CX12g016878 | LOC_Os12g21940 | Os12g0408000 | - | Detail |
| C2H12g20707 | 12:10,867,053-10,867,430 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016341 | 12:19,861,374-19,864,599 | - | C1H12g10259 | C2H12g17120 | LOC_Os12g38750 | Os12g0576600 | - | Detail |
| CX12g017028 | 12:19,872,547-19,875,756 | - | C1H12g21793 | C2H12g04894 | LOC_Os12g38760 | Os12g0576700 | - | Detail |
| CX12g016600 | 12:19,880,900-19,883,945 | - | C1H12g30700 | C2H12g26878 | LOC_Os12g38770 | Os12g0576750 | PAP1B, OsPAP1b, NPP2, OsNPP2 | Detail |
| CX12g017595 | 12:19,885,766-19,891,905 | - | C1H12g05519 | C2H12g26810 | LOC_Os12g38780 | Os12g0576900 | - | Detail |
| CX12g017201 | 12:19,893,955-19,896,179 | + | C1H12g22000 | C2H12g06238 | LOC_Os12g38790 | Os12g0577000 | - | Detail |
| CX12g016939 | 12:19,897,325-19,904,829 | + | C1H12g15638 | C2H12g22098 | LOC_Os12g38800 | Os12g0577100 | - | Detail |
| CX12g017608 | 12:19,910,981-19,912,021 | + | C1H12g30406 | C2H12g08874 | LOC_Os12g38810 | Os12g0577200 | - | Detail |
| CX12g015510 | 12:19,927,142-19,927,330 | + | C1H12g15716 | C2H12g25612 | - | Os12g0603800 | - | Detail |
| CX12g015208 | 12:19,934,855-19,938,124 | + | C1H12g21439 | C2H12g22738 | LOC_Os12g38850 | Os12g0577600 | - | Detail |
| CX12g018076 | 12:19,939,954-19,942,336 | - | C1H12g00519 | C2H12g29158 | LOC_Os12g38860 | Os12g0577700 | - | Detail |
| CX12g015574 | 12:19,946,600-19,949,180 | - | C1H12g00369 | C2H12g06115 | LOC_Os12g38870 | Os12g0577800 | - | Detail |
| CX12g017526 | 12:19,966,284-19,968,113 | - | C1H12g31425 | C2H12g21149 | LOC_Os12g38880 | Os12g0578000 | - | Detail |
| CX12g015487 | 12:19,968,940-19,969,913 | + | C1H12g00225 | C2H12g11743 | - | Os12g0530100 | - | Detail |
| CX12g016002 | 12:19,972,207-19,976,524 | + | C1H12g19103 | C2H12g17013 | LOC_Os12g38900 | Os12g0578200 | - | Detail |
| CX12g018018 | 12:19,979,698-19,981,875 | + | C1H12g25977 | C2H12g27102 | LOC_Os12g38910 | Os12g0578300 | - | Detail |
| CX12g017088 | 12:19,985,183-19,988,601 | + | C1H12g22422 | C2H12g06963 | LOC_Os12g38920 | Os12g0578400 | - | Detail |
| CX12g016623 | 12:19,989,725-19,994,274 | - | C1H12g15232 | C2H12g18495 | LOC_Os12g38930 | Os12g0578500 | - | Detail |
| CX12g015550 | 12:19,998,224-19,999,309 | - | C1H12g27740 | C2H12g09933 | LOC_Os12g38940 | Os12g0578600 | - | Detail |
| CX12g017948 | 12:20,002,077-20,002,880 | - | C1H12g14974 | C2H12g24390 | LOC_Os12g38950 | Os12g0578700 | - | Detail |
| CX12g015244 | 12:20,006,454-20,009,615 | - | C1H12g25491 | C2H12g12388 | LOC_Os12g38960 | Os12g0578800 | - | Detail |