| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g11981 | 4:22,247,167-22,262,155 | - | C2H4g20441 | CX4g034232 | LOC_Os04g43050 | Os04g0509300 | DCL4, OsDCL4, Os DCL4, Dcl4 | Detail |
| C1H4g16776 | 4:22,265,929-22,266,408 | + | C2H4g11339 | CX4g036588 | LOC_Os04g43060 | Os04g0509400 | - | Detail |
| C1H4g16652 | 4:22,273,773-22,275,269 | + | C2H4g01906 | CX2g024932 | LOC_Os04g43070 | Os04g0509600 | - | Detail |
| C1H4g26953 | 4:22,289,040-22,297,319 | + | C2H4g26482 | CX4g031449 | LOC_Os04g43130 | Os04g0510300 | - | Detail |
| C1H4g20471 | 4:22,297,962-22,303,906 | - | C2H4g00596 | CX4g031438 | LOC_Os04g43140 | Os04g0510400 | - | Detail |
| C1H4g03093 | 4:22,306,343-22,311,917 | + | C2H4g19563 | CX4g035958 | LOC_Os04g43150 | Os04g0510500 | - | Detail |
| C1H4g15211 | 4:22,312,483-22,313,610 | - | C2H4g02205 | CX4g032117 | LOC_Os04g43160 | Os04g0510600 | - | Detail |
| C1H4g29813 | 4:22,314,260-22,316,880 | - | C2H4g20983 | CX4g033894 | LOC_Os04g43164 | Os04g0510700 | - | Detail |
| C1H4g14181 | 4:22,318,026-22,318,794 | - | C2H4g07283 | CX4g036379 | LOC_Os04g43170 | Os04g0510900 | - | Detail |
| C1H4g12029 | 4:22,319,072-22,319,383 | - | C2H4g07283 | CX4g036379 | LOC_Os04g43170 | Os04g0510900 | - | Detail |
| C1H4g05553 | 4:22,324,231-22,325,673 | - | C2H4g15069 | CX4g033517 | LOC_Os04g43200 | Os04g0511200 | OsClo5, OsEFA27 | Detail |
| C1H4g09400 | 4:22,327,296-22,329,770 | - | C2H4g28433 | CX4g033340 | LOC_Os04g43210 | Os04g0511400 | - | Detail |
| C1H4g08179 | 4:22,333,306-22,339,230 | - | C2H4g23749 | CX4g035801 | LOC_Os04g43220 | Os04g0511600 | - | Detail |
| C1H4g06483 | 4:22,340,677-22,342,821 | - | C2H4g20352 | CX4g032463 | LOC_Os04g43230 | Os04g0511700 | - | Detail |
| C1H4g23962 | 4:22,345,909-22,354,374 | - | C2H4g11071 | CX4g032044 | LOC_Os04g43270 | Os04g0512200 | - | Detail |
| C1H4g05127 | 4:22,357,820-22,358,279 | - | C2H4g01985 | CX4g033280 | LOC_Os04g43290 | Os04g0512300 | OsGASD | Detail |
| C1H4g13576 | 4:22,359,001-22,360,364 | - | C2H4g01985 | CX4g033280 | LOC_Os04g43290 | Os04g0512300 | OsGASD | Detail |
| C1H4g19931 | 4:22,360,962-22,365,118 | - | C2H4g16701 | CX4g034378 | LOC_Os04g43300 | Os04g0512400 | - | Detail |
| C1H4g27340 | 4:22,367,404-22,367,799 | - | C2H4g10802 | CX4g035063 | LOC_Os04g43310 | Os04g0512500 | - | Detail |
| C1H4g13563 | 4:22,380,486-22,385,136 | - | C2H4g29440 | CX4g033268 | LOC_Os04g43340 | Os04g0512900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016341 | 12:19,861,374-19,864,599 | - | C1H12g10259 | C2H12g17120 | LOC_Os12g38750 | Os12g0576600 | - | Detail |
| CX12g017028 | 12:19,872,547-19,875,756 | - | C1H12g21793 | C2H12g04894 | LOC_Os12g38760 | Os12g0576700 | - | Detail |
| CX12g016600 | 12:19,880,900-19,883,945 | - | C1H12g30700 | C2H12g26878 | LOC_Os12g38770 | Os12g0576750 | PAP1B, OsPAP1b, NPP2, OsNPP2 | Detail |
| CX12g017595 | 12:19,885,766-19,891,905 | - | C1H12g05519 | C2H12g26810 | LOC_Os12g38780 | Os12g0576900 | - | Detail |
| CX12g017201 | 12:19,893,955-19,896,179 | + | C1H12g22000 | C2H12g06238 | LOC_Os12g38790 | Os12g0577000 | - | Detail |
| CX12g016939 | 12:19,897,325-19,904,829 | + | C1H12g15638 | C2H12g22098 | LOC_Os12g38800 | Os12g0577100 | - | Detail |
| CX12g017608 | 12:19,910,981-19,912,021 | + | C1H12g30406 | C2H12g08874 | LOC_Os12g38810 | Os12g0577200 | - | Detail |
| CX12g015510 | 12:19,927,142-19,927,330 | + | C1H12g15716 | C2H12g25612 | - | Os12g0603800 | - | Detail |
| CX12g015208 | 12:19,934,855-19,938,124 | + | C1H12g21439 | C2H12g22738 | LOC_Os12g38850 | Os12g0577600 | - | Detail |
| CX12g018076 | 12:19,939,954-19,942,336 | - | C1H12g00519 | C2H12g29158 | LOC_Os12g38860 | Os12g0577700 | - | Detail |
| CX12g015574 | 12:19,946,600-19,949,180 | - | C1H12g00369 | C2H12g06115 | LOC_Os12g38870 | Os12g0577800 | - | Detail |
| CX12g017526 | 12:19,966,284-19,968,113 | - | C1H12g31425 | C2H12g21149 | LOC_Os12g38880 | Os12g0578000 | - | Detail |
| CX12g015487 | 12:19,968,940-19,969,913 | + | C1H12g00225 | C2H12g11743 | - | Os12g0530100 | - | Detail |
| CX12g016002 | 12:19,972,207-19,976,524 | + | C1H12g19103 | C2H12g17013 | LOC_Os12g38900 | Os12g0578200 | - | Detail |
| CX12g018018 | 12:19,979,698-19,981,875 | + | C1H12g25977 | C2H12g27102 | LOC_Os12g38910 | Os12g0578300 | - | Detail |
| CX12g017088 | 12:19,985,183-19,988,601 | + | C1H12g22422 | C2H12g06963 | LOC_Os12g38920 | Os12g0578400 | - | Detail |
| CX12g016623 | 12:19,989,725-19,994,274 | - | C1H12g15232 | C2H12g18495 | LOC_Os12g38930 | Os12g0578500 | - | Detail |
| CX12g015550 | 12:19,998,224-19,999,309 | - | C1H12g27740 | C2H12g09933 | LOC_Os12g38940 | Os12g0578600 | - | Detail |
| CX12g017948 | 12:20,002,077-20,002,880 | - | C1H12g14974 | C2H12g24390 | LOC_Os12g38950 | Os12g0578700 | - | Detail |
| CX12g015244 | 12:20,006,454-20,009,615 | - | C1H12g25491 | C2H12g12388 | LOC_Os12g38960 | Os12g0578800 | - | Detail |