| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g25678 | 8:21,566,550-21,572,231 | + | C1H8g14574 | CX8g050443 | LOC_Os08g40230 | Os08g0513300 | - | Detail |
| C2H8g07895 | 8:21,572,930-21,573,352 | + | - | - | LOC_Os08g40240 | Os08g0513100 | - | Detail |
| C2H8g07807 | 8:21,582,158-21,589,327 | + | C1H8g02817 | CX8g053430 | LOC_Os08g40250 | Os08g0513600 | - | Detail |
| C2H8g10681 | 8:21,602,963-21,608,619 | + | C1H8g07902 | CX8g051853 | LOC_Os08g40260 | Os08g0513700 | - | Detail |
| C2H8g16589 | 8:21,614,415-21,618,068 | + | C1H8g20761 | CX8g053302 | LOC_Os08g40270 | Os08g0514000 | - | Detail |
| C2H8g21861 | 8:21,619,780-21,626,313 | + | C1H8g14426 | CX8g054156 | LOC_Os08g40280 | Os08g0514100 | - | Detail |
| C2H8g14662 | 8:21,629,343-21,630,362 | - | C1H8g01546 | CX8g054758 | LOC_Os08g40380 | Os08g0515000 | - | Detail |
| C2H8g06813 | 8:21,634,624-21,635,619 | - | C1H8g22798 | CX8g053954 | LOC_Os08g40380 | Os08g0515000 | - | Detail |
| C2H8g29882 | 8:21,645,303-21,646,545 | - | C1H8g04520 | CX8g051939 | LOC_Os08g40390 | Os08g0515000 | - | Detail |
| C2H8g25508 | 8:21,655,199-21,659,572 | + | C1H8g00343 | CX8g053908 | LOC_Os08g40420 | Os08g0515700 | - | Detail |
| C2H8g21949 | 8:21,659,761-21,660,762 | - | C1H8g12041 | CX8g054335 | LOC_Os08g40430 | Os08g0515800 | - | Detail |
| C2H8g13304 | 8:21,663,831-21,667,522 | - | C1H8g24019 | CX8g052303 | LOC_Os08g40450 | - | - | Detail |
| C2H8g21198 | 8:21,671,963-21,672,994 | + | C1H8g28828 | CX8g052892 | LOC_Os08g40490 | Os08g0516550 | - | Detail |
| C2H8g27391 | 8:21,685,621-21,686,001 | - | - | CX8g050760 | LOC_Os08g40500 | Os08g0516600 | - | Detail |
| C2H8g02421 | 8:21,700,122-21,701,364 | + | C1H8g29868 | CX8g052544 | LOC_Os08g40510 | Os08g0516900 | SKIN2 | Detail |
| C2H8g03156 | 8:21,708,485-21,710,030 | + | C1H8g20359 | CX8g050708 | LOC_Os08g44940 | Os08g0517100 | - | Detail |
| C2H8g07227 | 8:21,710,153-21,721,161 | - | C1H8g00269 | CX8g053694 | LOC_Os08g40530 | Os08g0517200 | - | Detail |
| C2H8g18297 | 8:21,728,262-21,733,766 | - | C1H8g17373 | CX8g050895 | LOC_Os08g40560 | Os08g0517300 | - | Detail |
| C2H8g02480 | 8:21,734,971-21,738,049 | - | C1H8g19010 | CX8g054455 | LOC_Os08g40570 | Os08g0517500 | - | Detail |
| C2H8g09039 | 8:21,739,272-21,742,483 | - | C1H8g28269 | CX8g054260 | LOC_Os08g40580 | Os08g0517600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015365 | 12:18,622,705-18,627,873 | - | C1H12g13279 | C2H12g26461 | LOC_Os12g36620 | Os12g0552300 | PPS1 | Detail |
| CX12g016909 | 12:18,628,838-18,632,663 | - | C1H12g27529 | C2H12g05175 | LOC_Os12g36640 | Os12g0552500 | - | Detail |
| CX12g015364 | 12:18,661,884-18,663,498 | + | C1H12g15786 | C2H12g12611 | LOC_Os12g36660 | Os12g0552600 | TGW12a, qTGW12a | Detail |
| CX12g016435 | 12:18,673,636-18,677,431 | + | C1H12g29275 | C2H12g05930 | LOC_Os12g36670 | Os12g0552700 | - | Detail |
| CX12g015172 | 12:18,681,837-18,684,329 | + | C1H12g24562 | C2H12g03052 | LOC_Os12g36680 | Os12g0552800 | - | Detail |
| CX12g016948 | 12:18,686,028-18,686,231 | - | - | C2H12g05968 | - | - | - | Detail |
| CX12g018213 | 12:18,687,189-18,690,809 | - | C1H12g15410 | C2H12g02154 | LOC_Os12g36690 | Os12g0516300 | - | Detail |
| CX12g016931 | 12:18,693,366-18,693,599 | + | C1H12g01930 | C2H12g06633 | - | - | - | Detail |
| CX12g015515 | 12:18,706,131-18,707,944 | - | C1H12g04068 | C2H12g05761 | LOC_Os12g36750 | Os12g0516800 | - | Detail |
| CX12g017302 | 12:18,709,694-18,710,628 | + | C1H1g06454 | C2H1g24956 | - | - | - | Detail |
| CX12g016097 | 12:18,714,916-18,724,701 | - | C1H12g01446 | C2H12g14585 | LOC_Os12g36760 | Os12g0554400 | - | Detail |
| CX12g016599 | 12:18,726,200-18,730,665 | - | C1H12g23720 | C2H12g15590 | LOC_Os12g36770 | Os12g0554500 | - | Detail |
| CX12g017228 | 12:18,730,997-18,731,170 | + | - | - | - | Os02g0188201 | - | Detail |
| CX12g018046 | 12:18,753,697-18,756,939 | + | C1H12g01737 | C2H12g04076 | LOC_Os12g36810 | Os12g0554800 | - | Detail |
| CX12g016121 | 12:18,785,921-18,789,866 | - | C1H12g31071 | C2H12g14752 | LOC_Os12g36890 | Os12g0555600 | ND1, CSLD4, OsCSLD4, OsCD1, CD1, SPO1 | Detail |
| CX12g015599 | 12:18,798,679-18,803,662 | + | C1H12g15134 | C2H12g19509 | LOC_Os12g36900 | Os12g0556100 | - | Detail |
| CX12g018685 | 12:18,804,772-18,804,945 | + | - | - | - | - | - | Detail |
| CX12g016424 | 12:18,811,212-18,814,826 | + | C1H12g31407 | C2H12g19756 | LOC_Os12g36910 | Os12g0556200 | - | Detail |
| CX12g018147 | 12:18,818,430-18,821,949 | + | C1H12g03891 | C2H12g09262 | LOC_Os12g36920 | Os12g0556300 | - | Detail |
| CX12g015253 | 12:18,834,059-18,837,021 | + | C1H12g14972 | C2H12g12821 | LOC_Os12g36940 | Os12g0556500 | - | Detail |