| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07438 | 1:33,787,088-33,790,949 | - | C2H1g05749 | CX1g005380 | LOC_Os01g65680 | Os01g0878800 | - | Detail |
| C1H1g15520 | 1:33,794,851-33,795,372 | - | C2H1g05749 | CX1g005380 | LOC_Os01g65680 | Os01g0878900 | - | Detail |
| C1H1g20719 | 1:33,798,650-33,799,237 | + | - | CX1g003006 | LOC_Os01g65700 | Os01g0879200 | - | Detail |
| C1H1g25090 | 1:33,800,575-33,801,252 | + | - | CX1g003321 | LOC_Os01g65710 | Os01g0879300 | - | Detail |
| C1H1g02620 | 1:33,803,260-33,806,281 | + | C2H1g27566 | CX1g006723 | LOC_Os01g65720 | Os01g0879400 | - | Detail |
| C1H1g27446 | 1:33,806,636-33,809,251 | - | C2H1g14458 | CX1g001626 | LOC_Os01g65730 | Os01g0879500 | - | Detail |
| C1H1g18600 | 1:33,813,333-33,815,393 | + | C2H1g09705 | CX1g006046 | LOC_Os01g65740 | Os01g0879600 | - | Detail |
| C1H1g25092 | 1:33,836,927-33,842,303 | + | C2H1g22339 | CX1g002139 | LOC_Os01g65780 | Os01g0880200 | - | Detail |
| C1H1g20354 | 1:33,846,959-33,850,450 | - | C2H1g26105 | CX1g002644 | LOC_Os01g65790 | Os01g0880300 | - | Detail |
| C1H1g04264 | 1:33,851,724-33,856,464 | - | C2H1g17822 | CX1g004875 | LOC_Os01g65800 | Os01g0880400 | - | Detail |
| C1H1g01792 | 1:33,862,201-33,863,439 | + | C2H1g29982 | CX1g003781 | LOC_Os01g65830 | Os01g0880800 | - | Detail |
| C1H1g17934 | 1:33,864,502-33,866,148 | - | C2H1g06200 | CX1g001321 | LOC_Os01g65840 | Os01g0880900 | - | Detail |
| C1H1g23013 | 1:33,866,601-33,875,049 | - | C2H1g11118 | CX1g006572 | LOC_Os01g65850 | Os01g0881000 | - | Detail |
| C1H1g25389 | 1:33,876,597-33,878,150 | - | C2H1g12436 | CX1g004581 | LOC_Os01g65860 | Os01g0881100 | - | Detail |
| C1H1g04016 | 1:33,893,484-33,898,163 | + | C2H1g12086 | CX1g005363 | LOC_Os01g65880 | Os01g0881300 | - | Detail |
| C1H1g23337 | 1:33,898,423-33,902,038 | + | C2H1g15181 | CX1g003286 | LOC_Os01g65890 | Os01g0881400 | - | Detail |
| C1H1g30922 | 1:33,902,590-33,906,198 | - | C2H1g03014 | CX1g002063 | LOC_Os01g65900 | Os01g0881500 | - | Detail |
| C1H1g06237 | 1:33,910,334-33,912,972 | - | C2H1g06093 | CX1g004823 | LOC_Os01g65920 | Os01g0881900 | - | Detail |
| C1H1g06784 | 1:33,917,751-33,921,744 | - | C2H1g20602 | CX1g005629 | LOC_Os01g65940 | Os01g0881966 | - | Detail |
| C1H1g26227 | 1:33,922,996-33,923,995 | + | C2H1g18577 | CX1g002714 | LOC_Os01g65950 | Os01g0882100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g015365 | 12:18,622,705-18,627,873 | - | C1H12g13279 | C2H12g26461 | LOC_Os12g36620 | Os12g0552300 | PPS1 | Detail |
| CX12g016909 | 12:18,628,838-18,632,663 | - | C1H12g27529 | C2H12g05175 | LOC_Os12g36640 | Os12g0552500 | - | Detail |
| CX12g015364 | 12:18,661,884-18,663,498 | + | C1H12g15786 | C2H12g12611 | LOC_Os12g36660 | Os12g0552600 | TGW12a, qTGW12a | Detail |
| CX12g016435 | 12:18,673,636-18,677,431 | + | C1H12g29275 | C2H12g05930 | LOC_Os12g36670 | Os12g0552700 | - | Detail |
| CX12g015172 | 12:18,681,837-18,684,329 | + | C1H12g24562 | C2H12g03052 | LOC_Os12g36680 | Os12g0552800 | - | Detail |
| CX12g016948 | 12:18,686,028-18,686,231 | - | - | C2H12g05968 | - | - | - | Detail |
| CX12g018213 | 12:18,687,189-18,690,809 | - | C1H12g15410 | C2H12g02154 | LOC_Os12g36690 | Os12g0516300 | - | Detail |
| CX12g016931 | 12:18,693,366-18,693,599 | + | C1H12g01930 | C2H12g06633 | - | - | - | Detail |
| CX12g015515 | 12:18,706,131-18,707,944 | - | C1H12g04068 | C2H12g05761 | LOC_Os12g36750 | Os12g0516800 | - | Detail |
| CX12g017302 | 12:18,709,694-18,710,628 | + | C1H1g06454 | C2H1g24956 | - | - | - | Detail |
| CX12g016097 | 12:18,714,916-18,724,701 | - | C1H12g01446 | C2H12g14585 | LOC_Os12g36760 | Os12g0554400 | - | Detail |
| CX12g016599 | 12:18,726,200-18,730,665 | - | C1H12g23720 | C2H12g15590 | LOC_Os12g36770 | Os12g0554500 | - | Detail |
| CX12g017228 | 12:18,730,997-18,731,170 | + | - | - | - | Os02g0188201 | - | Detail |
| CX12g018046 | 12:18,753,697-18,756,939 | + | C1H12g01737 | C2H12g04076 | LOC_Os12g36810 | Os12g0554800 | - | Detail |
| CX12g016121 | 12:18,785,921-18,789,866 | - | C1H12g31071 | C2H12g14752 | LOC_Os12g36890 | Os12g0555600 | ND1, CSLD4, OsCSLD4, OsCD1, CD1, SPO1 | Detail |
| CX12g015599 | 12:18,798,679-18,803,662 | + | C1H12g15134 | C2H12g19509 | LOC_Os12g36900 | Os12g0556100 | - | Detail |
| CX12g018685 | 12:18,804,772-18,804,945 | + | - | - | - | - | - | Detail |
| CX12g016424 | 12:18,811,212-18,814,826 | + | C1H12g31407 | C2H12g19756 | LOC_Os12g36910 | Os12g0556200 | - | Detail |
| CX12g018147 | 12:18,818,430-18,821,949 | + | C1H12g03891 | C2H12g09262 | LOC_Os12g36920 | Os12g0556300 | - | Detail |
| CX12g015253 | 12:18,834,059-18,837,021 | + | C1H12g14972 | C2H12g12821 | LOC_Os12g36940 | Os12g0556500 | - | Detail |