| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22731 | 1:24,806,899-24,821,417 | - | C2H1g03816 | CX1g004904 | LOC_Os01g48680 | Os01g0678500 | TPC1, OsTPC1, Tpc1, OsCC1 | Detail |
| C1H1g06484 | 1:24,822,645-24,824,648 | + | C2H1g17432 | CX1g001832 | LOC_Os01g48690 | Os01g0678600 | - | Detail |
| C1H1g21202 | 1:24,825,534-24,828,516 | - | C2H1g29587 | CX1g005378 | LOC_Os01g48700 | Os01g0678700 | - | Detail |
| C1H1g29809 | 1:24,831,421-24,834,882 | + | C2H1g22453 | CX1g000800 | - | - | - | Detail |
| C1H1g09148 | 1:24,836,776-24,837,408 | - | C2H1g18621 | CX1g006182 | LOC_Os01g48710 | Os01g0678800 | - | Detail |
| C1H1g01369 | 1:24,845,874-24,854,466 | + | C2H1g02873 | CX1g006519 | LOC_Os01g48720 | Os01g0679000 | - | Detail |
| C1H1g15834 | 1:24,862,555-24,939,365 | - | C2H1g22016 | CX1g002522 | LOC_Os01g48830 | Os01g0680700 | - | Detail |
| C1H1g09308 | 1:24,863,371-24,867,936 | + | C2H1g10975 | CX1g004313 | LOC_Os01g48750 | Os01g0679550 | - | Detail |
| C1H1g00895 | 1:24,869,571-24,872,932 | + | C2H1g25010 | CX1g003619 | LOC_Os01g48760 | Os01g0679600 | - | Detail |
| C1H1g15404 | 1:24,886,940-24,893,719 | + | C2H1g01242 | CX1g003718 | LOC_Os01g48790 | Os01g0679900 | - | Detail |
| C1H1g14743 | 1:24,904,493-24,905,653 | + | C2H1g18628 | CX1g004327 | LOC_Os01g48800 | Os01g0680200 | OsPUP4, BG3/OsPUP4, BG3 | Detail |
| C1H1g08166 | 1:24,917,950-24,920,122 | + | C2H1g09841 | CX1g006918 | LOC_Os01g48810 | Os01g0680400 | - | Detail |
| C1H1g07424 | 1:24,925,640-24,926,551 | + | C2H1g14175 | CX1g002655 | LOC_Os01g48820 | Os01g0680600 | - | Detail |
| C1H1g07492 | 1:24,931,644-24,932,133 | + | - | - | - | Os01g0680650 | - | Detail |
| C1H1g17992 | 1:24,948,315-24,950,911 | - | C2H1g29263 | CX1g007143 | LOC_Os01g48850 | Os01g0680900 | - | Detail |
| C1H1g20689 | 1:24,952,547-24,958,250 | - | C2H1g05013 | CX1g002388 | LOC_Os01g48874 | Os01g0681000 | - | Detail |
| C1H1g14533 | 1:24,963,599-24,966,274 | + | C2H1g17133 | CX1g001461 | LOC_Os01g48900 | Os01g0681100 | - | Detail |
| C1H1g07251 | 1:24,966,702-24,969,016 | + | C2H1g07127 | CX1g001461 | LOC_Os01g48900 | Os05g0556100 | - | Detail |
| C1H1g21340 | 1:24,970,459-24,975,608 | - | C2H1g13127 | CX1g007055 | LOC_Os01g48910 | Os01g0681200 | - | Detail |
| C1H1g18369 | 1:24,978,777-24,984,105 | - | C2H1g29187 | CX1g000478 | LOC_Os01g48920 | Os01g0681400 | ATG6A, OsATG6a | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016937 | 12:18,057,768-18,058,079 | + | C1H12g09399 | C2H12g22588 | LOC_Os12g35330 | Os12g0538600 | - | Detail |
| CX12g018516 | 12:18,071,100-18,071,414 | + | C1H12g08152 | C2H12g24646 | LOC_Os12g35340 | Os12g0538700 | - | Detail |
| CX12g016665 | 12:18,078,630-18,078,902 | - | - | - | - | Os09g0276600 | - | Detail |
| CX12g015103 | 12:18,083,757-18,089,348 | + | C1H12g11332 | C2H12g13849 | LOC_Os12g35350 | Os12g0538800 | - | Detail |
| CX12g015271 | 12:18,089,905-18,096,400 | - | C1H12g06541 | C2H12g24582 | LOC_Os12g35360 | Os12g0538900 | - | Detail |
| CX12g017572 | 12:18,107,284-18,108,051 | + | C1H12g07194 | C2H12g05658 | LOC_Os12g35480 | Os12g0540000 | - | Detail |
| CX12g018573 | 12:18,114,701-18,116,913 | + | C1H12g00936 | C2H12g27985 | LOC_Os12g35550 | Os12g0540700 | - | Detail |
| CX12g016773 | 12:18,118,467-18,123,406 | + | C1H12g23067 | C2H12g21794 | LOC_Os12g35560 | Os12g0540800 | - | Detail |
| CX12g017008 | 12:18,124,498-18,128,217 | - | C1H12g13037 | C2H12g01989 | LOC_Os12g35570 | Os12g0540900 | - | Detail |
| CX12g016686 | 12:18,129,628-18,130,533 | + | C1H12g12591 | C2H12g24684 | LOC_Os12g35580 | Os12g0541000 | - | Detail |
| CX12g017096 | 12:18,144,108-18,144,308 | - | - | - | - | Os12g0602200 | - | Detail |
| CX12g017105 | 12:18,146,741-18,151,444 | + | C1H12g20137 | C2H12g14686 | LOC_Os12g35610 | Os12g0541300 | RBOHH | Detail |
| CX12g017020 | 12:18,150,788-18,151,447 | - | - | - | - | Os12g0541350 | - | Detail |
| CX12g016516 | 12:18,159,519-18,163,929 | + | C1H12g07197 | C2H12g21241 | LOC_Os12g35630 | Os12g0541500 | - | Detail |
| CX12g015849 | 12:18,164,679-18,167,391 | - | C1H12g29545 | C2H12g24487 | LOC_Os12g35640 | - | - | Detail |
| CX12g017578 | 12:18,188,962-18,189,405 | - | C1H12g29994 | C2H12g19807 | - | - | - | Detail |
| CX12g018654 | 12:18,196,277-18,198,540 | - | C1H12g07668 | C2H12g20611 | LOC_Os12g35710 | Os12g0542200 | - | Detail |
| CX12g017312 | 12:18,248,840-18,249,328 | - | - | - | - | - | - | Detail |
| CX12g015941 | 12:18,268,082-18,269,779 | + | C1H12g11734 | C2H12g25944 | LOC_Os12g35890 | Os12g0543600 | - | Detail |
| CX12g017974 | 12:18,274,209-18,276,075 | + | C1H12g22624 | C2H12g29188 | LOC_Os12g36000 | Os12g0545400 | - | Detail |