| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g18962 | 5:12,540,821-12,542,672 | - | C1H5g00809 | CX5g037533 | LOC_Os05g25560 | Os05g0319900 | - | Detail |
| C2H5g16379 | 5:12,560,833-12,561,348 | + | C1H5g07771 | CX5g040926 | LOC_Os05g25600 | - | - | Detail |
| C2H5g17208 | 5:12,564,172-12,565,033 | + | C1H5g18434 | CX5g040614 | LOC_Os05g25620 | Os05g0320500 | - | Detail |
| C2H5g12884 | 5:12,571,540-12,575,563 | - | C1H5g29408 | CX5g040663 | LOC_Os05g25640 | Os05g0320700 | OsC4HL | Detail |
| C2H5g23272 | 5:12,622,131-12,622,888 | + | C1H5g31853 | CX5g039065 | - | Os05g0321900 | - | Detail |
| C2H5g30247 | 5:12,623,482-12,626,593 | + | C1H5g21190 | CX5g039065 | LOC_Os05g25770 | Os05g0321900 | - | Detail |
| C2H5g20457 | 5:12,642,054-12,643,214 | + | C1H5g09562 | CX5g039731 | LOC_Os05g25770 | Os05g0322900 | - | Detail |
| C2H5g00966 | 5:12,649,272-12,652,168 | + | C1H5g20684 | CX5g037483 | LOC_Os05g25780 | Os05g0323100 | - | Detail |
| C2H5g05199 | 5:12,658,867-12,659,098 | - | - | CX5g040463 | - | - | - | Detail |
| C2H5g12832 | 5:12,659,126-12,659,341 | - | C1H5g15138 | CX5g037550 | LOC_Os05g25784 | Os05g0323400 | - | Detail |
| C2H5g27944 | 5:12,666,481-12,670,358 | + | C1H5g03510 | - | - | - | - | Detail |
| C2H5g23193 | 5:12,666,616-12,670,222 | - | C1H5g02171 | CX5g037938 | LOC_Os05g25320 | Os05g0475600 | - | Detail |
| C2H5g25840 | 5:12,682,852-12,686,503 | + | C1H5g07569 | CX5g038231 | LOC_Os05g25840 | Os05g0323800 | - | Detail |
| C2H5g02562 | 5:12,687,807-12,692,024 | + | C1H5g09336 | CX5g039355 | LOC_Os05g25850 | Os05g0323900 | SODA1, SodA1, Mn-SOD, Mn- SOD, OsMSD, OsMSD1 | Detail |
| C2H5g29319 | 5:12,693,761-12,695,203 | + | C1H5g18365 | CX5g038450 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C2H5g21674 | 5:12,722,634-12,724,518 | + | C1H5g16408 | CX5g037596 | LOC_Os05g25170 | - | - | Detail |
| C2H5g11879 | 5:12,724,950-12,726,343 | + | C1H5g24963 | CX5g039314 | LOC_Os05g25170 | - | - | Detail |
| C2H5g22294 | 5:12,730,462-12,732,138 | + | C1H5g19700 | CX5g038330 | LOC_Os05g25860 | Os05g0324000 | - | Detail |
| C2H5g05113 | 5:12,732,485-12,735,940 | - | C1H5g26142 | CX5g040251 | LOC_Os05g25880 | Os05g0324200 | - | Detail |
| C2H5g27623 | 5:12,768,072-12,770,998 | - | C1H5g16305 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX12g016123 | 12:16,976,748-16,980,743 | - | C1H12g06590 | C2H12g03303 | LOC_Os12g32870 | Os12g0215100 | - | Detail |
| CX12g016087 | 12:16,988,369-16,991,547 | - | C1H12g26954 | C2H12g00633 | LOC_Os12g32880 | Os12g0480800 | - | Detail |
| CX12g017262 | 12:17,003,249-17,003,575 | + | - | - | - | - | - | Detail |
| CX12g018776 | 12:17,017,730-17,018,551 | + | C1H7g00055 | - | - | - | - | Detail |
| CX12g018119 | 12:17,019,228-17,020,601 | - | C1H12g26954 | C2H12g07164 | LOC_Os12g32920 | Os12g0481000 | - | Detail |
| CX12g018296 | 12:17,022,636-17,022,887 | + | - | - | - | - | - | Detail |
| CX12g015793 | 12:17,024,319-17,025,741 | - | - | C2H12g09815 | LOC_Os12g32930 | Os12g0513800 | - | Detail |
| CX12g018613 | 12:17,026,600-17,028,376 | - | C1H12g27576 | C2H12g04487 | LOC_Os12g32940 | Os12g0514000 | OsPLT15 | Detail |
| CX12g015332 | 12:17,032,349-17,035,565 | - | C1H12g02478 | C2H12g14026 | LOC_Os12g32950 | Os12g0514100 | - | Detail |
| CX12g016868 | 12:17,040,219-17,040,821 | - | C1H12g29231 | C2H12g26822 | LOC_Os12g32970 | Os12g0514300 | - | Detail |
| CX12g018673 | 12:17,044,142-17,047,423 | - | C1H12g18347 | C2H12g20474 | LOC_Os12g32980 | Os12g0514400 | SAB23 | Detail |
| CX12g017191 | 12:17,049,589-17,055,347 | - | C1H12g11241 | C2H12g13347 | LOC_Os12g32986 | Os12g0514500 | - | Detail |
| CX12g017474 | 12:17,056,561-17,060,318 | - | C1H12g21511 | C2H12g29103 | LOC_Os12g32992 | Os12g0514600 | - | Detail |
| CX12g016990 | 12:17,065,415-17,068,962 | + | C1H12g00544 | C2H12g05027 | LOC_Os12g33020 | Os12g0514900 | - | Detail |
| CX12g016294 | 12:17,071,712-17,082,320 | + | C1H12g30514 | C2H12g13196 | - | Os12g0133800 | OsPIN1d | Detail |
| CX12g016248 | 12:17,093,067-17,096,137 | - | C1H12g17110 | C2H12g00435 | LOC_Os12g33070 | Os12g0515300 | OsMYB46 | Detail |
| CX12g017573 | 12:17,101,162-17,101,684 | + | - | - | - | - | - | Detail |
| CX12g015827 | 12:17,103,232-17,103,450 | - | - | - | - | - | - | Detail |
| CX12g016936 | 12:17,107,646-17,110,824 | + | C1H12g09493 | C2H12g00847 | LOC_Os12g33080 | Os12g0515400 | - | Detail |
| CX12g017334 | 12:17,125,351-17,127,207 | + | C1H12g04283 | C2H12g01460 | LOC_Os12g33090 | Os12g0515500 | - | Detail |