| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g27567 | 2:28,713,562-28,714,318 | - | - | CX2g023147 | LOC_Os02g51170 | - | - | Detail |
| C2H2g23677 | 2:28,715,532-28,718,618 | - | C1H2g23262 | CX2g022616 | LOC_Os02g51180 | Os02g0746000 | CUL3A, OsCUL3a | Detail |
| C2H2g14227 | 2:28,757,564-28,758,793 | + | C1H6g16379 | CX2g021847 | LOC_Os02g51280 | Os02g0747400 | - | Detail |
| C2H2g02022 | 2:28,767,126-28,767,555 | + | C1H2g19953 | CX2g021307 | - | - | - | Detail |
| C2H2g20238 | 2:28,768,578-28,770,553 | + | C1H2g09862 | CX2g024649 | LOC_Os02g51290 | Os02g0747500 | - | Detail |
| C2H2g08371 | 2:28,771,241-28,775,453 | - | C1H2g31845 | CX2g020731 | LOC_Os02g51300 | Os02g0747600 | - | Detail |
| C2H2g00887 | 2:28,783,535-28,784,028 | - | C1H2g24533 | CX2g020483 | LOC_Os02g51320 | Os02g0747900 | ILI5, OsBUL1, PGL2 | Detail |
| C2H2g18570 | 2:28,793,221-28,798,652 | - | C1H2g27272 | CX2g019270 | LOC_Os02g51330 | Os02g0748100 | - | Detail |
| C2H2g16535 | 2:28,803,199-28,805,963 | - | C1H2g12274 | CX2g021584 | LOC_Os02g51350 | Os02g0748300 | - | Detail |
| C2H2g08744 | 2:28,820,504-28,821,613 | - | C1H2g24397 | CX6g045737 | LOC_Os02g51370 | Os02g0748800 | - | Detail |
| C2H2g14137 | 2:28,822,545-28,836,452 | + | C1H2g22698 | CX2g024543 | LOC_Os02g51400 | Os02g0749150 | - | Detail |
| C2H2g26680 | 2:28,837,534-28,837,975 | + | - | CX2g021190 | - | Os02g0749250 | - | Detail |
| C2H2g17894 | 2:28,845,259-28,847,680 | + | C1H2g05950 | CX2g023763 | LOC_Os02g51410 | Os02g0749300 | OsSK1 | Detail |
| C2H2g10488 | 2:28,849,991-28,850,742 | - | C1H2g31897 | CX2g021245 | LOC_Os02g51420 | Os02g0749450 | - | Detail |
| C2H2g05153 | 2:28,852,821-28,864,243 | - | C1H2g13604 | CX2g020151 | LOC_Os02g51430 | Os02g0749500 | - | Detail |
| C2H2g12052 | 2:28,867,496-28,869,643 | - | C1H2g12915 | CX2g024014 | LOC_Os02g51440 | Os02g0749700 | OsLAC10 | Detail |
| C2H2g08739 | 2:28,872,626-28,873,822 | + | C1H2g04161 | CX2g021687 | LOC_Os02g51450 | Os02g0749800 | - | Detail |
| C2H2g16243 | 2:28,874,953-28,876,101 | + | C1H6g11956 | CX2g021687 | LOC_Os02g51460 | Os02g0749900 | - | Detail |
| C2H2g18210 | 2:28,878,401-28,879,132 | + | C1H2g29493 | CX2g022869 | LOC_Os02g51470 | Os02g0750100 | - | Detail |
| C2H2g20576 | 2:28,881,079-28,882,894 | + | C1H2g27058 | CX2g023867 | LOC_Os02g51480 | Os02g0750400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002839 | 1:7,965,003-7,968,083 | + | C1H10g06964 | C2H1g07347 | LOC_Os01g15860 | Os01g0263600 | - | Detail |
| CX1g006868 | 1:7,988,614-7,991,522 | - | C1H1g18015 | C2H1g18028 | LOC_Os01g15900 | Os01g0264000 | RDD1, OsDof, OsDof2, Dof2, OsDof-2 | Detail |
| CX1g002913 | 1:7,994,733-7,994,882 | - | - | - | - | - | - | Detail |
| CX1g003610 | 1:8,020,520-8,021,287 | + | C1H1g15752 | C2H1g18875 | LOC_Os01g15970 | Os01g0264400 | - | Detail |
| CX1g005560 | 1:8,023,122-8,025,944 | + | C1H1g22583 | C2H1g29970 | LOC_Os01g15979 | Os01g0264500 | - | Detail |
| CX1g004846 | 1:8,028,267-8,029,871 | + | C1H1g22583 | C2H1g16351 | LOC_Os01g15990 | Os01g0264600 | - | Detail |
| CX1g003410 | 1:8,035,611-8,038,000 | - | C1H1g00764 | C2H1g04930 | LOC_Os01g16000 | Os01g0264700 | OsSec14-1 | Detail |
| CX1g006955 | 1:8,045,658-8,048,888 | + | C1H1g30463 | C2H1g18047 | LOC_Os01g16010 | Os01g0264900 | - | Detail |
| CX1g002598 | 1:8,051,182-8,052,549 | + | - | C2H1g05764 | LOC_Os01g16020 | Os01g0265000 | OsGGR2, LYL2, OsGGRII | Detail |
| CX1g006039 | 1:8,053,095-8,055,662 | - | C1H1g31421 | C2H1g10976 | LOC_Os01g16030 | Os01g0265100 | - | Detail |
| CX1g005747 | 1:8,058,574-8,061,692 | - | C1H1g11286 | C2H1g02114 | LOC_Os01g16040 | Os01g0265200 | OsPAPST1 | Detail |
| CX1g007112 | 1:8,070,569-8,070,853 | - | - | C2H1g11487 | - | - | - | Detail |
| CX1g002223 | 1:8,071,090-8,072,410 | - | - | C2H1g21228 | - | Os01g0265400 | - | Detail |
| CX1g003650 | 1:8,073,377-8,073,703 | - | C1H1g29094 | - | - | - | - | Detail |
| CX1g004697 | 1:8,084,310-8,086,992 | - | C1H1g21127 | C2H1g27693 | LOC_Os01g16080 | Os01g0265700 | - | Detail |
| CX1g004489 | 1:8,087,375-8,087,590 | + | - | - | - | - | - | Detail |
| CX1g000499 | 1:8,091,264-8,092,739 | - | - | C2H1g00739 | LOC_Os01g16090 | Os01g0265800 | - | Detail |
| CX1g001659 | 1:8,094,340-8,097,863 | - | C1H1g27759 | C2H1g10672 | LOC_Os01g16100 | Os01g0265900 | - | Detail |
| CX1g000998 | 1:8,109,159-8,117,754 | + | C1H1g07258 | C2H1g01396 | LOC_Os01g16110 | Os01g0266000 | - | Detail |
| CX1g004062 | 1:8,125,683-8,126,279 | + | C1H1g24050 | C2H1g23893 | LOC_Os01g16120 | Os01g0266100 | - | Detail |